RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 ZDHHC9Q9Y397 364 aa23.75■■□□□ 1.39
TRIO-223ENST00000515710 RIMBP2O15034 1052 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 PDIA4P13667 645 aaKnown RBP23.74■■□□□ 1.39
TRIO-223ENST00000515710 CHRNA5P30532 468 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 EVCP57679 992 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 AKNAD1Q5T1N1 836 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 SDR42E1Q8WUS8 393 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 PFKFB2O60825 505 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 CC2D2BQ6DHV5 1058 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 OLFM4Q6UX06 510 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 CHST3Q7LGC8 479 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 STAG1Q8WVM7 1258 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 GTF3C6Q969F1 213 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 KRT23Q9C075 422 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 RNF41Q9H4P4 317 aaPredicted RBP23.74■■□□□ 1.39
TRIO-223ENST00000515710 ATP8A2Q9NTI2 1148 aa23.74■■□□□ 1.39
TRIO-223ENST00000515710 AATFQ9NY61 560 aaKnown RBP eCLIP23.74■■□□□ 1.39
TRIO-223ENST00000515710 KIAA1551Q9HCM1 1747 aa23.73■■□□□ 1.39
TRIO-223ENST00000515710 DDX11L8A8MPP1 907 aa23.73■■□□□ 1.39
TRIO-223ENST00000515710 GJB2P29033 226 aa23.73■■□□□ 1.39
TRIO-223ENST00000515710 APOBRQ0VD83 1088 aa23.73■■□□□ 1.39
TRIO-223ENST00000515710 MFSD6Q6ZSS7 791 aa23.73■■□□□ 1.39
TRIO-223ENST00000515710 CERS3Q8IU89 383 aa23.73■■□□□ 1.39
TRIO-223ENST00000515710 C10orf71Q711Q0 1435 aa23.73■■□□□ 1.39
TRIO-223ENST00000515710 WDR33Q9C0J8 1336 aaKnown RBP23.73■■□□□ 1.39
TRIO-223ENST00000515710 BAG3O95817 575 aa23.72■■□□□ 1.39
TRIO-223ENST00000515710 ANTXR2P58335 489 aa23.72■■□□□ 1.39
TRIO-223ENST00000515710 PPP4CP60510 307 aa23.72■■□□□ 1.39
TRIO-223ENST00000515710 CTDSPL2Q05D32 466 aa23.72■■□□□ 1.39
TRIO-223ENST00000515710 PPARAQ07869 468 aa23.72■■□□□ 1.39
TRIO-223ENST00000515710 STK3Q13188 491 aa23.72■■□□□ 1.39
TRIO-223ENST00000515710 TIAM2Q8IVF5 1701 aa23.72■■□□□ 1.39
TRIO-223ENST00000515710 PTMSP20962 102 aa23.72■■□□□ 1.39
TRIO-223ENST00000515710 SLF2Q8IX21 1173 aa23.72■■□□□ 1.39
TRIO-223ENST00000515710 NOL10Q9BSC4 688 aaKnown RBP23.72■■□□□ 1.39
TRIO-223ENST00000515710 SUGT1Q9Y2Z0 365 aa23.72■■□□□ 1.39
TRIO-223ENST00000515710 C7orf43Q8WVR3 580 aa23.71■■□□□ 1.39
TRIO-223ENST00000515710 TMEM87BQ96K49 555 aa23.71■■□□□ 1.39
TRIO-223ENST00000515710 B4E1Z4 1266 aa23.71■■□□□ 1.39
TRIO-223ENST00000515710 GRIK5Q16478 980 aa23.71■■□□□ 1.39
TRIO-223ENST00000515710 MFSD14BQ5SR56 506 aa23.71■■□□□ 1.39
TRIO-223ENST00000515710 LLPHQ9BRT6 129 aaKnown RBP23.71■■□□□ 1.39
TRIO-223ENST00000515710 RTFDC1Q9BY42 306 aaPredicted RBP23.71■■□□□ 1.39
TRIO-223ENST00000515710 MROH7-TTC4A0A0A0MT08 1334 aa23.7■■□□□ 1.38
TRIO-223ENST00000515710 NEDD4P46934 1319 aa23.7■■□□□ 1.38
TRIO-223ENST00000515710 G3V3G9 751 aa23.7■■□□□ 1.38
TRIO-223ENST00000515710 BAG4O95429 457 aaKnown RBP23.7■■□□□ 1.38
TRIO-223ENST00000515710 GTF2IP78347 998 aa23.7■■□□□ 1.38
TRIO-223ENST00000515710 DCAF8Q5TAQ9 597 aa23.7■■□□□ 1.38
TRIO-223ENST00000515710 FAM163AQ96GL9 167 aaPredicted RBP23.7■■□□□ 1.38
TRIO-223ENST00000515710 PDIA3P30101 505 aaKnown RBP23.69■■□□□ 1.38
TRIO-223ENST00000515710 GRIPAP1Q4V328 841 aa23.69■■□□□ 1.38
TRIO-223ENST00000515710 CYB5R4Q7L1T6 521 aa23.69■■□□□ 1.38
TRIO-223ENST00000515710 MTA3Q9BTC8 594 aa23.69■■□□□ 1.38
TRIO-223ENST00000515710 MINDY4BA8MYZ0 360 aa23.69■■□□□ 1.38
TRIO-223ENST00000515710 GOLGA6L22H0YM25 854 aa23.69■■□□□ 1.38
TRIO-223ENST00000515710 STX6O43752 255 aa23.69■■□□□ 1.38
TRIO-223ENST00000515710 PCP11498 1178 aaKnown RBP23.69■■□□□ 1.38
TRIO-223ENST00000515710 SYT1P21579 422 aa23.69■■□□□ 1.38
TRIO-223ENST00000515710 SCRN1Q12765 414 aa23.69■■□□□ 1.38
TRIO-223ENST00000515710 DCP1AQ9NPI6 582 aaPredicted RBP23.69■■□□□ 1.38
TRIO-223ENST00000515710 PDCP20941 246 aa23.68■■□□□ 1.38
TRIO-223ENST00000515710 SBK1Q52WX2 424 aa23.68■■□□□ 1.38
TRIO-223ENST00000515710 CTR9Q6PD62 1173 aa23.68■■□□□ 1.38
TRIO-223ENST00000515710 PODNQ7Z5L7 613 aa23.68■■□□□ 1.38
TRIO-223ENST00000515710 ANGEL1Q9UNK9 670 aaKnown RBP23.68■■□□□ 1.38
TRIO-223ENST00000515710 SLX4Q8IY92 1834 aa23.68■■□□□ 1.38
TRIO-223ENST00000515710 DOK7Q18PE1 504 aa23.67■■□□□ 1.38
TRIO-223ENST00000515710 SUPT20HQ8NEM7 779 aa23.67■■□□□ 1.38
TRIO-223ENST00000515710 ZSWIM5Q9P217 1185 aa23.67■■□□□ 1.38
TRIO-223ENST00000515710 ARPP21Q9UBL0 812 aaPredicted RBP23.67■■□□□ 1.38
TRIO-223ENST00000515710 TACC3Q9Y6A5 838 aa23.67■■□□□ 1.38
TRIO-223ENST00000515710 SH2B2O14492 632 aaPredicted RBP23.67■■□□□ 1.38
TRIO-223ENST00000515710 DIXDC1Q155Q3 683 aa23.67■■□□□ 1.38
TRIO-223ENST00000515710 GPR75-ASB3A0A0A6YYF3 556 aa23.66■■□□□ 1.38
TRIO-223ENST00000515710 USP17L12C9JPN9 530 aa23.66■■□□□ 1.38
TRIO-223ENST00000515710 USP17L21D6R901 530 aa23.66■■□□□ 1.38
TRIO-223ENST00000515710 SMARCC2Q8TAQ2 1214 aa23.66■■□□□ 1.38
TRIO-223ENST00000515710 INCENPQ9NQS7 918 aa23.66■■□□□ 1.38
TRIO-223ENST00000515710 GPHNQ9NQX3 736 aaPredicted RBP23.66■■□□□ 1.38
TRIO-223ENST00000515710 KLF18A0A0U1RQI7 1052 aa23.65■■□□□ 1.38
TRIO-223ENST00000515710 KDM4AO75164 1064 aa23.65■■□□□ 1.38
TRIO-223ENST00000515710 ZSCAN22P10073 491 aaPredicted RBP23.65■■□□□ 1.38
TRIO-223ENST00000515710 PLCG2P16885 1265 aa23.65■■□□□ 1.38
TRIO-223ENST00000515710 TTLL6Q8N841 843 aa23.65■■□□□ 1.38
TRIO-223ENST00000515710 IGDCC4Q8TDY8 1250 aa23.65■■□□□ 1.38
TRIO-223ENST00000515710 NAP1L2Q9ULW6 460 aaPredicted RBP23.65■■□□□ 1.38
TRIO-223ENST00000515710 GAKO14976 1311 aa23.65■■□□□ 1.38
TRIO-223ENST00000515710 FGRP09769 529 aa23.65■■□□□ 1.38
TRIO-223ENST00000515710 LIFRP42702 1097 aa23.65■■□□□ 1.38
TRIO-223ENST00000515710 LARP1BQ659C4 914 aaKnown RBP23.65■■□□□ 1.38
TRIO-223ENST00000515710 SH3RF3Q8TEJ3 882 aaPredicted RBP23.65■■□□□ 1.38
TRIO-223ENST00000515710 TOMM22Q9NS69 142 aa23.65■■□□□ 1.38
TRIO-223ENST00000515710 ZNF219Q9P2Y4 722 aaPredicted RBP23.65■■□□□ 1.38
TRIO-223ENST00000515710 BRPF3Q9ULD4 1205 aa23.65■■□□□ 1.38
TRIO-223ENST00000515710 SLC3A2P08195 630 aaKnown RBP23.64■■□□□ 1.37
TRIO-223ENST00000515710 USP5P45974 858 aa23.64■■□□□ 1.37
TRIO-223ENST00000515710 HMGN5P82970 282 aaKnown RBP23.64■■□□□ 1.37
TRIO-223ENST00000515710 NKX2-3Q8TAU0 364 aa23.64■■□□□ 1.37
TRIO-223ENST00000515710 ESR2Q92731 530 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms