RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 FAM184AQ8NB25 1140 aa18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 FLAD1Q8NFF5 587 aa18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 SDR42E1Q8WUS8 393 aa18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 CNNM2Q9H8M5 875 aa18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 TNS1Q9HBL0 1735 aaKnown RBP18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 GOLGA8BA8MQT2 603 aa18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 PRDX5P30044 214 aa18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 DNM1Q05193 864 aaKnown RBP18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 L1TD1Q5T7N2 865 aaKnown RBP18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 FERMT3Q86UX7 667 aa18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 TDRD7Q8NHU6 1098 aaKnown RBP18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 STAG1Q8WVM7 1258 aa18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 MAST2Q6P0Q8 1798 aa18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 GADD45BO75293 160 aaPredicted RBP18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 ATP2B4P23634 1241 aa18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 TMED8Q6PL24 325 aaPredicted RBP18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 MFSD6Q6ZSS7 791 aa18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 ZNF804AQ7Z570 1209 aa18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 TMEM87BQ96K49 555 aa18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 GPR101Q96P66 508 aaPredicted RBP18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 PANK2Q9BZ23 570 aa18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 NRXN2Q9P2S2 1712 aa18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 UFL1O94874 794 aa18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 BRIP1Q9BX63 1249 aa18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 KRT23Q9C075 422 aa18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 RGS17Q9UGC6 210 aaPredicted RBP18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 ISY1Q9ULR0 285 aaKnown RBP18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 JAG2Q9Y219 1238 aa18.15■□□□□ 0.5
THUMPD3-210ENST00000515662 TCHHQ07283 1943 aa18.14■□□□□ 0.5
THUMPD3-210ENST00000515662 CHD4Q14839 1912 aa18.14■□□□□ 0.5
THUMPD3-210ENST00000515662 PPARAQ07869 468 aa18.14■□□□□ 0.49
THUMPD3-210ENST00000515662 SPTY2D1Q68D10 685 aaPredicted RBP18.14■□□□□ 0.49
THUMPD3-210ENST00000515662 IGDCC4Q8TDY8 1250 aa18.14■□□□□ 0.49
THUMPD3-210ENST00000515662 ZSWIM5Q9P217 1185 aa18.14■□□□□ 0.49
THUMPD3-210ENST00000515662 ANAPC4Q9UJX5 808 aa18.14■□□□□ 0.49
THUMPD3-210ENST00000515662 GGA1Q9UJY5 639 aa18.14■□□□□ 0.49
THUMPD3-210ENST00000515662 KIF3AQ9Y496 699 aa18.14■□□□□ 0.49
THUMPD3-210ENST00000515662 ANKRD31Q8N7Z5 1873 aa18.14■□□□□ 0.49
THUMPD3-210ENST00000515662 KDM4AO75164 1064 aa18.13■□□□□ 0.49
THUMPD3-210ENST00000515662 XRCC6P12956 609 aaKnown RBP eCLIP18.13■□□□□ 0.49
THUMPD3-210ENST00000515662 ZSCAN23Q3MJ62 389 aa18.13■□□□□ 0.49
THUMPD3-210ENST00000515662 WDR66Q8TBY9 1149 aa18.13■□□□□ 0.49
THUMPD3-210ENST00000515662 PODXL2Q9NZ53 605 aa18.13■□□□□ 0.49
THUMPD3-210ENST00000515662 RBM27Q9P2N5 1060 aaKnown RBP18.13■□□□□ 0.49
THUMPD3-210ENST00000515662 FIBPO43427 364 aa18.13■□□□□ 0.49
THUMPD3-210ENST00000515662 DHX16O60231 1041 aaKnown RBP18.13■□□□□ 0.49
THUMPD3-210ENST00000515662 RGPD3A6NKT7 1758 aaPredicted RBP18.13■□□□□ 0.49
THUMPD3-210ENST00000515662 RGPD4Q7Z3J3 1758 aa18.13■□□□□ 0.49
THUMPD3-210ENST00000515662 H3BQV1 296 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 CSPP1Q1MSJ5 1256 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 IFFO2Q5TF58 517 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 GIMAP6Q6P9H5 292 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 TMC4Q7Z404 712 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 GAS2L3Q86XJ1 694 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 RNF41Q9H4P4 317 aaPredicted RBP18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 LY9Q9HBG7 655 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 IGSF3O75054 1194 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 ZNF445P59923 1031 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 TMEM67Q5HYA8 995 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 RAB11FIP4Q86YS3 637 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 SENP2Q9HC62 589 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 TMEM63CQ9P1W3 806 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 LRRC37AA6NMS7 1700 aa18.12■□□□□ 0.49
THUMPD3-210ENST00000515662 MINDY4BA8MYZ0 360 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 FDPSP14324 419 aaKnown RBP18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 RESTQ13127 1097 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 FAM173BQ6P4H8 233 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 POTEAQ6S8J7 498 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 SGMS1Q86VZ5 419 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 DZIP1Q86YF9 867 aaKnown RBP18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 CCDC88AQ3V6T2 1871 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 PPEF1O14829 653 aaPredicted RBP18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 PPFIA3O75145 1194 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 MMP10P09238 476 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 LIFRP42702 1097 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 APOA5Q6Q788 366 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 TBC1D16Q8TBP0 767 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 CD209Q9NNX6 404 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 AATFQ9NY61 560 aaKnown RBP eCLIP18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 POLLQ9UGP5 575 aa18.11■□□□□ 0.49
THUMPD3-210ENST00000515662 LDHBP07195 334 aaKnown RBP18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 SRGNP10124 158 aa18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 UBE2HP62256 183 aa18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 KRT85P78386 507 aa18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 RRP12Q5JTH9 1297 aaKnown RBP18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 SP8Q8IXZ3 490 aa18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 LTBP1Q14766 1721 aa18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 KIAA1551Q9HCM1 1747 aa18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 IFIT3O14879 490 aaKnown RBP18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 IL1R1P14778 569 aa18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 CRNKL1Q9BZJ0 848 aaKnown RBP18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 ZSCAN16Q9H4T2 348 aaPredicted RBP18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 RRAGDQ9NQL2 400 aaPredicted RBP18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 TOMM22Q9NS69 142 aa18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 PARP3Q9Y6F1 533 aa18.1■□□□□ 0.49
THUMPD3-210ENST00000515662 NPR1P16066 1061 aa18.09■□□□□ 0.49
THUMPD3-210ENST00000515662 MRE11P49959 708 aa18.09■□□□□ 0.49
THUMPD3-210ENST00000515662 STK11IPQ8N1F8 1099 aa18.09■□□□□ 0.49
THUMPD3-210ENST00000515662 MTA3Q9BTC8 594 aa18.09■□□□□ 0.49
THUMPD3-210ENST00000515662 SMIM22K7EJ46 135 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms