RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 PRPF40BQ6NWY9 871 aaKnown RBP7.78□□□□□ -1.16
LINC01088-211ENST00000515597 TP53INP2Q8IXH6 220 aa7.78□□□□□ -1.16
LINC01088-211ENST00000515597 FLCNQ8NFG4 579 aa7.78□□□□□ -1.16
LINC01088-211ENST00000515597 TMC1Q8TDI8 760 aa7.78□□□□□ -1.16
LINC01088-211ENST00000515597 GSX1Q9H4S2 264 aaPredicted RBP7.78□□□□□ -1.16
LINC01088-211ENST00000515597 C1GALT1Q9NS00 363 aa7.78□□□□□ -1.16
LINC01088-211ENST00000515597 ZC3H7BQ9UGR2 993 aaKnown RBP7.78□□□□□ -1.16
LINC01088-211ENST00000515597 PPP1R9AQ9ULJ8 1098 aa7.78□□□□□ -1.16
LINC01088-211ENST00000515597 IGHA2P01877 340 aa7.77□□□□□ -1.17
LINC01088-211ENST00000515597 LIG1P18858 919 aa7.77□□□□□ -1.17
LINC01088-211ENST00000515597 FAAP100Q0VG06 881 aa7.77□□□□□ -1.17
LINC01088-211ENST00000515597 AP3B2Q13367 1082 aa7.77□□□□□ -1.17
LINC01088-211ENST00000515597 DUSP27Q5VZP5 1158 aa7.77□□□□□ -1.17
LINC01088-211ENST00000515597 ZC3H12CQ9C0D7 883 aaKnown RBP7.77□□□□□ -1.17
LINC01088-211ENST00000515597 TMEM238LA0A1B0GVL6 79 aa7.76□□□□□ -1.17
LINC01088-211ENST00000515597 BTBD11A6QL63 1104 aa7.76□□□□□ -1.17
LINC01088-211ENST00000515597 COL19A1Q14993 1142 aa7.76□□□□□ -1.17
LINC01088-211ENST00000515597 SEZ6L2Q6UXD5 910 aa7.76□□□□□ -1.17
LINC01088-211ENST00000515597 TXNDC2Q86VQ3 553 aa7.76□□□□□ -1.17
LINC01088-211ENST00000515597 GLIS3Q8NEA6 775 aa7.76□□□□□ -1.17
LINC01088-211ENST00000515597 EPS8L3Q8TE67 593 aaKnown RBP7.76□□□□□ -1.17
LINC01088-211ENST00000515597 WDR89Q96FK6 387 aaPredicted RBP7.76□□□□□ -1.17
LINC01088-211ENST00000515597 FBXL18Q96ME1 805 aa7.76□□□□□ -1.17
LINC01088-211ENST00000515597 CCDC86Q9H6F5 360 aaKnown RBP7.76□□□□□ -1.17
LINC01088-211ENST00000515597 TMPRSS2O15393 492 aa7.75□□□□□ -1.17
LINC01088-211ENST00000515597 CYP27A1Q02318 531 aa7.75□□□□□ -1.17
LINC01088-211ENST00000515597 PTPN12Q05209 780 aaKnown RBP7.75□□□□□ -1.17
LINC01088-211ENST00000515597 GRM2Q14416 872 aa7.75□□□□□ -1.17
LINC01088-211ENST00000515597 CBLL1Q75N03 491 aa7.75□□□□□ -1.17
LINC01088-211ENST00000515597 RETREG2Q8NC44 543 aa7.75□□□□□ -1.17
LINC01088-211ENST00000515597 CITED4Q96RK1 184 aa7.75□□□□□ -1.17
LINC01088-211ENST00000515597 DNAJC25Q9H1X3 360 aa7.75□□□□□ -1.17
LINC01088-211ENST00000515597 PAK6Q9NQU5 681 aaPredicted RBP7.75□□□□□ -1.17
LINC01088-211ENST00000515597 CSRNP1Q96S65 589 aa7.74□□□□□ -1.17
LINC01088-211ENST00000515597 PDE4CQ08493 712 aa7.73□□□□□ -1.17
LINC01088-211ENST00000515597 CDK5R2Q13319 367 aa7.73□□□□□ -1.17
LINC01088-211ENST00000515597 RPS26P11Q5JNZ5 115 aaPredicted RBP7.73□□□□□ -1.17
LINC01088-211ENST00000515597 PI16Q6UXB8 463 aa7.73□□□□□ -1.17
LINC01088-211ENST00000515597 ZNF574Q6ZN55 896 aaPredicted RBP7.73□□□□□ -1.17
LINC01088-211ENST00000515597 ZNF862O60290 1169 aa7.72□□□□□ -1.17
LINC01088-211ENST00000515597 YBX3P16989 372 aaKnown RBP eCLIP7.72□□□□□ -1.17
LINC01088-211ENST00000515597 FCGRTP55899 365 aa7.72□□□□□ -1.17
LINC01088-211ENST00000515597 OGFOD3Q6PK18 319 aa7.72□□□□□ -1.17
LINC01088-211ENST00000515597 PIDD1Q9HB75 910 aa7.72□□□□□ -1.17
LINC01088-211ENST00000515597 CRIM1Q9NZV1 1036 aa7.72□□□□□ -1.17
LINC01088-211ENST00000515597 TRAK1Q9UPV9 953 aa7.72□□□□□ -1.17
LINC01088-211ENST00000515597 GSTP1P09211 210 aaKnown RBP7.71□□□□□ -1.18
LINC01088-211ENST00000515597 ID3Q02535 119 aa7.71□□□□□ -1.18
LINC01088-211ENST00000515597 DTHD1Q6ZMT9 781 aa7.71□□□□□ -1.18
LINC01088-211ENST00000515597 DMRTB1Q96MA1 342 aa7.71□□□□□ -1.18
LINC01088-211ENST00000515597 FANCD2OSQ96PS1 177 aa7.71□□□□□ -1.18
LINC01088-211ENST00000515597 GPN3Q9UHW5 284 aaPredicted RBP7.71□□□□□ -1.18
LINC01088-211ENST00000515597 SYNGAP1Q96PV0 1343 aa7.71□□□□□ -1.18
LINC01088-211ENST00000515597 FAM87AP0C7U9 286 aa7.7□□□□□ -1.18
LINC01088-211ENST00000515597 WFDC3Q8IUB2 231 aa7.7□□□□□ -1.18
LINC01088-211ENST00000515597 FAM181AQ8N9Y4 354 aa7.7□□□□□ -1.18
LINC01088-211ENST00000515597 AGBL5Q8NDL9 886 aa7.7□□□□□ -1.18
LINC01088-211ENST00000515597 ALKBH8Q96BT7 664 aaKnown RBP7.7□□□□□ -1.18
LINC01088-211ENST00000515597 PCDHGC5Q9Y5F6 944 aa7.7□□□□□ -1.18
LINC01088-211ENST00000515597 HCLS1P14317 486 aaPredicted RBP7.69□□□□□ -1.18
LINC01088-211ENST00000515597 ITGB5P18084 799 aa7.69□□□□□ -1.18
LINC01088-211ENST00000515597 KIF4BQ2VIQ3 1234 aa7.69□□□□□ -1.18
LINC01088-211ENST00000515597 PLD6Q8N2A8 252 aaKnown RBP7.69□□□□□ -1.18
LINC01088-211ENST00000515597 BCL7CQ8WUZ0 217 aaPredicted RBP7.69□□□□□ -1.18
LINC01088-211ENST00000515597 RBCK1Q9BYM8 510 aa7.69□□□□□ -1.18
LINC01088-211ENST00000515597 ATXN3LQ9H3M9 355 aa7.69□□□□□ -1.18
LINC01088-211ENST00000515597 DISC1Q9NRI5 854 aa7.69□□□□□ -1.18
LINC01088-211ENST00000515597 U3KQE9 123 aa7.69□□□□□ -1.18
LINC01088-211ENST00000515597 SOWAHDA6NJG2 315 aa7.68□□□□□ -1.18
LINC01088-211ENST00000515597 SLFN14P0C7P3 912 aa7.68□□□□□ -1.18
LINC01088-211ENST00000515597 TTLL4Q14679 1199 aa7.68□□□□□ -1.18
LINC01088-211ENST00000515597 CYP27C1Q4G0S4 372 aa7.68□□□□□ -1.18
LINC01088-211ENST00000515597 OGFOD2Q6N063 350 aa7.68□□□□□ -1.18
LINC01088-211ENST00000515597 SPRED2Q7Z698 418 aa7.68□□□□□ -1.18
LINC01088-211ENST00000515597 SMYD4Q8IYR2 804 aaPredicted RBP7.68□□□□□ -1.18
LINC01088-211ENST00000515597 STK35Q8TDR2 534 aa7.68□□□□□ -1.18
LINC01088-211ENST00000515597 KCNB2Q92953 911 aa7.68□□□□□ -1.18
LINC01088-211ENST00000515597 SLC5A6Q9Y289 635 aa7.68□□□□□ -1.18
LINC01088-211ENST00000515597 ARID1BQ8NFD5 2236 aaPredicted RBP7.68□□□□□ -1.18
LINC01088-211ENST00000515597 RNGTTO60942 597 aaKnown RBP7.67□□□□□ -1.18
LINC01088-211ENST00000515597 BNIP3Q12983 259 aa7.67□□□□□ -1.18
LINC01088-211ENST00000515597 PLCL1Q15111 1095 aa7.67□□□□□ -1.18
LINC01088-211ENST00000515597 TMC7Q7Z402 723 aa7.67□□□□□ -1.18
LINC01088-211ENST00000515597 PDZD3Q86UT5 571 aa7.67□□□□□ -1.18
LINC01088-211ENST00000515597 CCER1Q8TC90 406 aaPredicted RBP7.67□□□□□ -1.18
LINC01088-211ENST00000515597 BCO2Q9BYV7 579 aa7.67□□□□□ -1.18
LINC01088-211ENST00000515597 KRT82Q9NSB4 513 aa7.67□□□□□ -1.18
LINC01088-211ENST00000515597 TMEM39AQ9NV64 488 aa7.67□□□□□ -1.18
LINC01088-211ENST00000515597 NLRP2Q9NX02 1062 aa7.67□□□□□ -1.18
LINC01088-211ENST00000515597 LEFTY1O75610 366 aa7.66□□□□□ -1.18
LINC01088-211ENST00000515597 NEFMP07197 916 aa7.66□□□□□ -1.18
LINC01088-211ENST00000515597 PPP2R3AQ06190 1150 aa7.66□□□□□ -1.18
LINC01088-211ENST00000515597 SULF2Q8IWU5 870 aa7.66□□□□□ -1.18
LINC01088-211ENST00000515597 ASIC4Q96FT7 647 aa7.66□□□□□ -1.18
LINC01088-211ENST00000515597 CD96P40200 585 aa7.65□□□□□ -1.18
LINC01088-211ENST00000515597 BIN2Q9UBW5 565 aaPredicted RBP7.65□□□□□ -1.18
LINC01088-211ENST00000515597 AKAP2Q9Y2D5 859 aa7.65□□□□□ -1.18
LINC01088-211ENST00000515597 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
LINC01088-211ENST00000515597 PNMA6FA0A0J9YX94 578 aa7.64□□□□□ -1.19
LINC01088-211ENST00000515597 PAPLNO95428 1278 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms