RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 SP8Q8IXZ3 490 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 MB21D2Q8IYB1 491 aaPredicted RBP12.06□□□□□ -0.48
SNF8-214ENST00000515174 IFNL3Q8IZI9 196 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 WDR66Q8TBY9 1149 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 GTF3C6Q969F1 213 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 NACAP1Q9BZK3 213 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 ANAPC4Q9UJX5 808 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 ATP6V1DQ9Y5K8 247 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 STX6O43752 255 aa12.05□□□□□ -0.48
SNF8-214ENST00000515174 MBD4O95243 580 aa12.05□□□□□ -0.48
SNF8-214ENST00000515174 ZSCAN22P10073 491 aaPredicted RBP12.05□□□□□ -0.48
SNF8-214ENST00000515174 PCP11498 1178 aaKnown RBP12.05□□□□□ -0.48
SNF8-214ENST00000515174 SYT1P21579 422 aa12.05□□□□□ -0.48
SNF8-214ENST00000515174 CYP7A1P22680 504 aa12.05□□□□□ -0.48
SNF8-214ENST00000515174 TRDNQ13061 729 aa12.05□□□□□ -0.48
SNF8-214ENST00000515174 COL9A3Q14050 684 aaPredicted RBP12.05□□□□□ -0.48
SNF8-214ENST00000515174 NOL8Q76FK4 1167 aaKnown RBP12.05□□□□□ -0.48
SNF8-214ENST00000515174 C2CD5Q86YS7 1000 aa12.05□□□□□ -0.48
SNF8-214ENST00000515174 CERS3Q8IU89 383 aa12.05□□□□□ -0.48
SNF8-214ENST00000515174 CCDC83Q8IWF9 413 aa12.05□□□□□ -0.48
SNF8-214ENST00000515174 SMARCC2Q8TAQ2 1214 aa12.05□□□□□ -0.48
SNF8-214ENST00000515174 RIOK1Q9BRS2 568 aaKnown RBP12.05□□□□□ -0.48
SNF8-214ENST00000515174 CNNM2Q9H8M5 875 aa12.05□□□□□ -0.48
SNF8-214ENST00000515174 SNED1Q8TER0 1413 aa12.04□□□□□ -0.48
SNF8-214ENST00000515174 COL1A1P02452 1464 aaPredicted RBP12.04□□□□□ -0.48
SNF8-214ENST00000515174 WTIPA6NIX2 430 aaPredicted RBP12.04□□□□□ -0.48
SNF8-214ENST00000515174 SRGNP10124 158 aa12.04□□□□□ -0.48
SNF8-214ENST00000515174 IL1R1P14778 569 aa12.04□□□□□ -0.48
SNF8-214ENST00000515174 NPR1P16066 1061 aa12.04□□□□□ -0.48
SNF8-214ENST00000515174 GJB2P29033 226 aa12.04□□□□□ -0.48
SNF8-214ENST00000515174 ALDH1B1P30837 517 aa12.04□□□□□ -0.48
SNF8-214ENST00000515174 PDE6BP35913 854 aa12.04□□□□□ -0.48
SNF8-214ENST00000515174 HMGN5P82970 282 aaKnown RBP12.04□□□□□ -0.48
SNF8-214ENST00000515174 ZNF804AQ7Z570 1209 aa12.04□□□□□ -0.48
SNF8-214ENST00000515174 RALYLQ86SE5 291 aaKnown RBP12.04□□□□□ -0.48
SNF8-214ENST00000515174 NSUN4Q96CB9 384 aaKnown RBP12.04□□□□□ -0.48
SNF8-214ENST00000515174 TMEM87BQ96K49 555 aa12.04□□□□□ -0.48
SNF8-214ENST00000515174 LMBRD1Q9NUN5 540 aa12.04□□□□□ -0.48
SNF8-214ENST00000515174 ANKIB1Q9P2G1 1089 aa12.04□□□□□ -0.48
SNF8-214ENST00000515174 ADAMTSL1Q8N6G6 1762 aa12.04□□□□□ -0.48
SNF8-214ENST00000515174 SCN9AQ15858 1988 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 MAGEB6P1A0A0J9YX57 407 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 PPEF1O14829 653 aaPredicted RBP12.03□□□□□ -0.48
SNF8-214ENST00000515174 FGRP09769 529 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 VEGFAP15692 232 aaPredicted RBP12.03□□□□□ -0.48
SNF8-214ENST00000515174 PDIA3P30101 505 aaKnown RBP12.03□□□□□ -0.48
SNF8-214ENST00000515174 RASSF7Q02833 373 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 KLHL40Q2TBA0 621 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 NAA16Q6N069 864 aaPredicted RBP12.03□□□□□ -0.48
SNF8-214ENST00000515174 TMEM87AQ8NBN3 555 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 STAG1Q8WVM7 1258 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 BRF1Q92994 677 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 KRT23Q9C075 422 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 NBPF3Q9H094 633 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 NAPBQ9H115 298 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 RNF41Q9H4P4 317 aaPredicted RBP12.03□□□□□ -0.48
SNF8-214ENST00000515174 RAI14Q9P0K7 980 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 GGA1Q9UJY5 639 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 ISY1Q9ULR0 285 aaKnown RBP12.03□□□□□ -0.48
SNF8-214ENST00000515174 MTMR6Q9Y217 621 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 ATP6V0A2Q9Y487 856 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 KIF3AQ9Y496 699 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 TIAM2Q8IVF5 1701 aa12.03□□□□□ -0.48
SNF8-214ENST00000515174 LAMA4Q16363 1823 aa12.02□□□□□ -0.48
SNF8-214ENST00000515174 PRC1O43663 620 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 DHX16O60231 1041 aaKnown RBP12.02□□□□□ -0.49
SNF8-214ENST00000515174 APPP05067 770 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 LIFRP42702 1097 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 PPP4CP60510 307 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 GPSM2P81274 684 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 FGD1P98174 961 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 AKNAD1Q5T1N1 836 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 LARP1BQ659C4 914 aaKnown RBP12.02□□□□□ -0.49
SNF8-214ENST00000515174 TXNRD3Q86VQ6 643 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 LCORLQ8N3X6 602 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 NECAB1Q8N987 351 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 ZNF622Q969S3 477 aaKnown RBP eCLIP12.02□□□□□ -0.49
SNF8-214ENST00000515174 MASTLQ96GX5 879 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 TCEANC2Q96MN5 208 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
SNF8-214ENST00000515174 ARMT1Q9H993 441 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 EPB41L4AQ9HCS5 686 aaPredicted RBP12.02□□□□□ -0.49
SNF8-214ENST00000515174 ABCF2Q9UG63 623 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 SLC4A4Q9Y6R1 1079 aa12.02□□□□□ -0.49
SNF8-214ENST00000515174 F13A1P00488 732 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 LDHCP07864 332 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 LMNB1P20700 586 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 KLRK1P26718 216 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 RCAN1P53805 252 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 ANTXR2P58335 489 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 GSTO1P78417 241 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 MECOMQ03112 1051 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 SCRN1Q12765 414 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 SBK1Q52WX2 424 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 STYK1Q6J9G0 422 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 OLFM4Q6UX06 510 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 SGMS1Q86VZ5 419 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 TMTC2Q8N394 836 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 ZNF384Q8TF68 577 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 FAM163AQ96GL9 167 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms