RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CYP8B1Q9UNU6 501 aa8.38□□□□□ -1.07
HMGCS1-207ENST00000514610 ZNF862O60290 1169 aa8.37□□□□□ -1.07
HMGCS1-207ENST00000514610 SELPP16109 830 aa8.37□□□□□ -1.07
HMGCS1-207ENST00000514610 EIF4A3P38919 411 aaKnown RBP8.37□□□□□ -1.07
HMGCS1-207ENST00000514610 RASSF7Q02833 373 aa8.37□□□□□ -1.07
HMGCS1-207ENST00000514610 MAP1SQ66K74 1059 aaPredicted RBP8.37□□□□□ -1.07
HMGCS1-207ENST00000514610 FBXL19Q6PCT2 694 aa8.37□□□□□ -1.07
HMGCS1-207ENST00000514610 KCNB2Q92953 911 aa8.37□□□□□ -1.07
HMGCS1-207ENST00000514610 WDR89Q96FK6 387 aaPredicted RBP8.37□□□□□ -1.07
HMGCS1-207ENST00000514610 LRRC14Q15048 493 aa8.36□□□□□ -1.07
HMGCS1-207ENST00000514610 PRRT3Q5FWE3 981 aa8.36□□□□□ -1.07
HMGCS1-207ENST00000514610 BNC2Q6ZN30 1099 aaPredicted RBP8.36□□□□□ -1.07
HMGCS1-207ENST00000514610 KIAA1211Q6ZU35 1233 aa8.36□□□□□ -1.07
HMGCS1-207ENST00000514610 TRIM42Q8IWZ5 723 aa8.36□□□□□ -1.07
HMGCS1-207ENST00000514610 TMEM151AQ8N4L1 468 aa8.36□□□□□ -1.07
HMGCS1-207ENST00000514610 GPBAR1Q8TDU6 330 aa8.36□□□□□ -1.07
HMGCS1-207ENST00000514610 ZNF296Q8WUU4 475 aaPredicted RBP8.36□□□□□ -1.07
HMGCS1-207ENST00000514610 SCARF2Q96GP6 870 aaPredicted RBP8.36□□□□□ -1.07
HMGCS1-207ENST00000514610 TINF2Q9BSI4 451 aa8.36□□□□□ -1.07
HMGCS1-207ENST00000514610 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
HMGCS1-207ENST00000514610 EIF4EBP3O60516 100 aaPredicted RBP8.35□□□□□ -1.07
HMGCS1-207ENST00000514610 GREM1O60565 184 aa8.35□□□□□ -1.07
HMGCS1-207ENST00000514610 TRIM37O94972 964 aa8.35□□□□□ -1.07
HMGCS1-207ENST00000514610 GDF11O95390 407 aa8.35□□□□□ -1.07
HMGCS1-207ENST00000514610 LIG1P18858 919 aa8.35□□□□□ -1.07
HMGCS1-207ENST00000514610 DUOXA2Q1HG44 320 aa8.35□□□□□ -1.07
HMGCS1-207ENST00000514610 IGF2-ASQ6U949 168 aa8.35□□□□□ -1.07
HMGCS1-207ENST00000514610 GOLM1Q8NBJ4 401 aa8.35□□□□□ -1.07
HMGCS1-207ENST00000514610 SPON2Q9BUD6 331 aa8.35□□□□□ -1.07
HMGCS1-207ENST00000514610 F13A1P00488 732 aa8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 SPATA31C1P0DKV0 1188 aa8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 ZC3H6P61129 1189 aaKnown RBP8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 PAK2Q13177 524 aa8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 PDE3AQ14432 1141 aa8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 SNAP47Q5SQN1 464 aa8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 ACAD11Q709F0 780 aa8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 KIAA0825Q8IV33 1275 aa8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 DCAF11Q8TEB1 546 aa8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 JARID2Q92833 1246 aaPredicted RBP8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 EAF1Q96JC9 268 aaPredicted RBP8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 MIR1-1HGQ9H1L0 117 aa8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 KRT82Q9NSB4 513 aa8.34□□□□□ -1.07
HMGCS1-207ENST00000514610 FAM221AA4D161 298 aa8.33□□□□□ -1.08
HMGCS1-207ENST00000514610 CRKP46108 304 aa8.33□□□□□ -1.08
HMGCS1-207ENST00000514610 CDK8P49336 464 aa8.33□□□□□ -1.08
HMGCS1-207ENST00000514610 NAALADL2Q58DX5 795 aa8.33□□□□□ -1.08
HMGCS1-207ENST00000514610 AGGF1Q8N302 714 aaeCLIP8.33□□□□□ -1.08
HMGCS1-207ENST00000514610 FBXO27Q8NI29 283 aa8.33□□□□□ -1.08
HMGCS1-207ENST00000514610 C8orf37Q96NL8 207 aa8.33□□□□□ -1.08
HMGCS1-207ENST00000514610 WDR18Q9BV38 432 aa8.33□□□□□ -1.08
HMGCS1-207ENST00000514610 TMPRSS13Q9BYE2 586 aa8.33□□□□□ -1.08
HMGCS1-207ENST00000514610 CAPN10Q9HC96 672 aa8.33□□□□□ -1.08
HMGCS1-207ENST00000514610 LMNB1P20700 586 aa8.32□□□□□ -1.08
HMGCS1-207ENST00000514610 GJA8P48165 433 aa8.32□□□□□ -1.08
HMGCS1-207ENST00000514610 KIF4BQ2VIQ3 1234 aa8.32□□□□□ -1.08
HMGCS1-207ENST00000514610 SCARA3Q6AZY7 606 aa8.32□□□□□ -1.08
HMGCS1-207ENST00000514610 FAM196AQ6ZSG2 479 aa8.32□□□□□ -1.08
HMGCS1-207ENST00000514610 CCDC84Q86UT8 332 aaPredicted RBP8.32□□□□□ -1.08
HMGCS1-207ENST00000514610 RUSC1Q9BVN2 902 aa8.32□□□□□ -1.08
HMGCS1-207ENST00000514610 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
HMGCS1-207ENST00000514610 UBP1Q9NZI7 540 aa8.32□□□□□ -1.08
HMGCS1-207ENST00000514610 SUPT16HQ9Y5B9 1047 aaKnown RBP8.32□□□□□ -1.08
HMGCS1-207ENST00000514610 PCDHGC5Q9Y5F6 944 aa8.32□□□□□ -1.08
HMGCS1-207ENST00000514610 F8W735 103 aaPredicted RBP8.31□□□□□ -1.08
HMGCS1-207ENST00000514610 AOC2O75106 756 aa8.31□□□□□ -1.08
HMGCS1-207ENST00000514610 CILPO75339 1184 aa8.31□□□□□ -1.08
HMGCS1-207ENST00000514610 ALX3O95076 343 aa8.31□□□□□ -1.08
HMGCS1-207ENST00000514610 GATAD2BQ8WXI9 593 aa8.31□□□□□ -1.08
HMGCS1-207ENST00000514610 LENG1Q96BZ8 264 aaPredicted RBP8.31□□□□□ -1.08
HMGCS1-207ENST00000514610 INPP5FQ9Y2H2 1132 aa8.31□□□□□ -1.08
HMGCS1-207ENST00000514610 MEGF11A6BM72 1044 aa8.3□□□□□ -1.08
HMGCS1-207ENST00000514610 TLR3O15455 904 aaKnown RBP8.3□□□□□ -1.08
HMGCS1-207ENST00000514610 INPP5AQ14642 412 aa8.3□□□□□ -1.08
HMGCS1-207ENST00000514610 EXOSC6Q5RKV6 272 aaKnown RBP8.3□□□□□ -1.08
HMGCS1-207ENST00000514610 ACSBG1Q96GR2 724 aa8.3□□□□□ -1.08
HMGCS1-207ENST00000514610 NT5C1AQ9BXI3 368 aa8.3□□□□□ -1.08
HMGCS1-207ENST00000514610 PCDHA4Q9UN74 947 aa8.3□□□□□ -1.08
HMGCS1-207ENST00000514610 LRFN4Q6PJG9 635 aa8.29□□□□□ -1.08
HMGCS1-207ENST00000514610 TMEM130Q8N3G9 435 aa8.29□□□□□ -1.08
HMGCS1-207ENST00000514610 GPRASP2Q96D09 838 aa8.29□□□□□ -1.08
HMGCS1-207ENST00000514610 LRRC3Q9BY71 257 aa8.29□□□□□ -1.08
HMGCS1-207ENST00000514610 RNF208Q9H0X6 261 aa8.29□□□□□ -1.08
HMGCS1-207ENST00000514610 PPP1R9AQ9ULJ8 1098 aa8.29□□□□□ -1.08
HMGCS1-207ENST00000514610 AKAP4Q5JQC9 854 aa8.28□□□□□ -1.08
HMGCS1-207ENST00000514610 RASGRP4Q8TDF6 673 aa8.28□□□□□ -1.08
HMGCS1-207ENST00000514610 PLPPR2Q96GM1 343 aa8.28□□□□□ -1.08
HMGCS1-207ENST00000514610 USP21Q9UK80 565 aa8.28□□□□□ -1.08
HMGCS1-207ENST00000514610 KRBA1A5PL33 1030 aa8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 TMPRSS2O15393 492 aa8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 TIAF1O95411 115 aa8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 DRD2P14416 443 aa8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 NOS3P29474 1203 aa8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 RPL6Q02878 288 aaKnown RBP8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 APOBRQ0VD83 1088 aa8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 ZC3H12AQ5D1E8 599 aaKnown RBP8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 WIPI1Q5MNZ9 446 aaPredicted RBP8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 HP1BP3Q5SSJ5 553 aaPredicted RBP8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 Q6ZS46 218 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms