RNA–Protein interactions for RNA: ENST00000513013.5

SUB1-212, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 5

Gene SUB1, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-212ENST00000513013 SHKBP1Q8TBC3 707 aa5.31□□□□□ -1.56
SUB1-212ENST00000513013 SNX29Q8TEQ0 813 aa5.31□□□□□ -1.56
SUB1-212ENST00000513013 SLC7A3Q8WY07 619 aa5.31□□□□□ -1.56
SUB1-212ENST00000513013 SRCIN1Q9C0H9 1055 aa5.31□□□□□ -1.56
SUB1-212ENST00000513013 GGNBP2Q9H3C7 697 aa5.31□□□□□ -1.56
SUB1-212ENST00000513013 SOX17Q9H6I2 414 aaPredicted RBP5.31□□□□□ -1.56
SUB1-212ENST00000513013 CNTN3Q9P232 1028 aa5.31□□□□□ -1.56
SUB1-212ENST00000513013 KANSL3Q9P2N6 904 aa5.31□□□□□ -1.56
SUB1-212ENST00000513013 PRKAG2Q9UGJ0 569 aa5.31□□□□□ -1.56
SUB1-212ENST00000513013 PRR19A6NJB7 356 aa5.3□□□□□ -1.56
SUB1-212ENST00000513013 MAP4P27816 1152 aaKnown RBP5.3□□□□□ -1.56
SUB1-212ENST00000513013 PREPP48147 710 aa5.3□□□□□ -1.56
SUB1-212ENST00000513013 IKBKEQ14164 716 aa5.3□□□□□ -1.56
SUB1-212ENST00000513013 HP1BP3Q5SSJ5 553 aaPredicted RBP5.3□□□□□ -1.56
SUB1-212ENST00000513013 HS2ST1Q7LGA3 356 aa5.3□□□□□ -1.56
SUB1-212ENST00000513013 NOP9Q86U38 636 aaKnown RBP5.3□□□□□ -1.56
SUB1-212ENST00000513013 C1orf127Q8N9H9 656 aa5.3□□□□□ -1.56
SUB1-212ENST00000513013 C12orf50Q8NA57 414 aaPredicted RBP5.3□□□□□ -1.56
SUB1-212ENST00000513013 METTL22Q9BUU2 404 aaPredicted RBP5.3□□□□□ -1.56
SUB1-212ENST00000513013 YIPF2Q9BWQ6 316 aa5.3□□□□□ -1.56
SUB1-212ENST00000513013 ACBD3Q9H3P7 528 aa5.3□□□□□ -1.56
SUB1-212ENST00000513013 C12orf49Q9H741 205 aa5.3□□□□□ -1.56
SUB1-212ENST00000513013 PIM2Q9P1W9 311 aa5.3□□□□□ -1.56
SUB1-212ENST00000513013 DDX41Q9UJV9 622 aaKnown RBP5.3□□□□□ -1.56
SUB1-212ENST00000513013 SOX13Q9UN79 622 aa5.3□□□□□ -1.56
SUB1-212ENST00000513013 CADPSQ9ULU8 1353 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 WDR64B1ANS9 1081 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 NFKBIEO00221 500 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 SMARCA5O60264 1052 aaPredicted RBP5.29□□□□□ -1.56
SUB1-212ENST00000513013 PHACTR2O75167 634 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 CDK11BP21127 795 aaKnown RBP5.29□□□□□ -1.56
SUB1-212ENST00000513013 RXRBP28702 533 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 ST13P50502 369 aaKnown RBP5.29□□□□□ -1.56
SUB1-212ENST00000513013 ARID5AQ03989 594 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 SOGA3Q5TF21 947 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 PAOXQ6QHF9 649 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 DPH6Q7L8W6 267 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 SMG8Q8ND04 991 aaKnown RBP5.29□□□□□ -1.56
SUB1-212ENST00000513013 OSMRQ99650 979 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 SUGCTQ9HAC7 445 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 ZFYVE1Q9HBF4 777 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 FAM8A1Q9UBU6 413 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 ANGEL1Q9UNK9 670 aaKnown RBP5.29□□□□□ -1.56
SUB1-212ENST00000513013 CDK11AQ9UQ88 783 aaPredicted RBP5.29□□□□□ -1.56
SUB1-212ENST00000513013 INPP5FQ9Y2H2 1132 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 LEMD3Q9Y2U8 911 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 RNF114Q9Y508 228 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 USP31Q70CQ4 1352 aa5.29□□□□□ -1.56
SUB1-212ENST00000513013 TNFRSF21O75509 655 aa5.28□□□□□ -1.56
SUB1-212ENST00000513013 USP11P51784 963 aa5.28□□□□□ -1.56
SUB1-212ENST00000513013 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.28□□□□□ -1.56
SUB1-212ENST00000513013 USP48Q86UV5 1035 aa5.28□□□□□ -1.56
SUB1-212ENST00000513013 VPS37DQ86XT2 251 aa5.28□□□□□ -1.56
SUB1-212ENST00000513013 NXPE3Q969Y0 559 aa5.28□□□□□ -1.56
SUB1-212ENST00000513013 CCDC74AQ96AQ1 378 aa5.28□□□□□ -1.56
SUB1-212ENST00000513013 OSBPL1AQ9BXW6 950 aa5.28□□□□□ -1.56
SUB1-212ENST00000513013 FAM95CA0A1B0GW59 222 aa5.27□□□□□ -1.57
SUB1-212ENST00000513013 NCLP19338 710 aaKnown RBP5.27□□□□□ -1.57
SUB1-212ENST00000513013 TAF1CQ15572 869 aaPredicted RBP5.27□□□□□ -1.57
SUB1-212ENST00000513013 EXOSC6Q5RKV6 272 aaKnown RBP5.27□□□□□ -1.57
SUB1-212ENST00000513013 ADAMTSL4Q6UY14 1074 aa5.27□□□□□ -1.57
SUB1-212ENST00000513013 DDX54Q8TDD1 881 aaKnown RBP5.27□□□□□ -1.57
SUB1-212ENST00000513013 MFSD14AQ96MC6 490 aa5.27□□□□□ -1.57
SUB1-212ENST00000513013 HIRIP3Q9BW71 556 aaPredicted RBP5.27□□□□□ -1.57
SUB1-212ENST00000513013 USP26Q9BXU7 913 aa5.27□□□□□ -1.57
SUB1-212ENST00000513013 TMPRSS13Q9BYE2 586 aa5.27□□□□□ -1.57
SUB1-212ENST00000513013 ZFYVE28Q9HCC9 887 aa5.27□□□□□ -1.57
SUB1-212ENST00000513013 GGT7Q9UJ14 662 aa5.27□□□□□ -1.57
SUB1-212ENST00000513013 A6NHS1 94 aa5.26□□□□□ -1.57
SUB1-212ENST00000513013 SOX1O00570 391 aaPredicted RBP5.26□□□□□ -1.57
SUB1-212ENST00000513013 FOSL1P15407 271 aa5.26□□□□□ -1.57
SUB1-212ENST00000513013 DNAJA1P31689 397 aaKnown RBP5.26□□□□□ -1.57
SUB1-212ENST00000513013 GTF2F1P35269 517 aaKnown RBP eCLIP5.26□□□□□ -1.57
SUB1-212ENST00000513013 GJA8P48165 433 aa5.26□□□□□ -1.57
SUB1-212ENST00000513013 TNNI2P48788 182 aa5.26□□□□□ -1.57
SUB1-212ENST00000513013 RACK1P63244 317 aaKnown RBP5.26□□□□□ -1.57
SUB1-212ENST00000513013 RBL2Q08999 1139 aa5.26□□□□□ -1.57
SUB1-212ENST00000513013 DHX38Q92620 1227 aaKnown RBP5.26□□□□□ -1.57
SUB1-212ENST00000513013 FBXL18Q96ME1 805 aa5.26□□□□□ -1.57
SUB1-212ENST00000513013 DNAJC2Q99543 621 aaKnown RBP5.26□□□□□ -1.57
SUB1-212ENST00000513013 ZKSCAN3Q9BRR0 538 aa5.26□□□□□ -1.57
SUB1-212ENST00000513013 OSBPL7Q9BZF2 842 aa5.26□□□□□ -1.57
SUB1-212ENST00000513013 LNPKQ9C0E8 428 aa5.26□□□□□ -1.57
SUB1-212ENST00000513013 BHLHE41Q9C0J9 482 aaPredicted RBP5.26□□□□□ -1.57
SUB1-212ENST00000513013 LOC100289279A0A1B0GTE1 492 aa5.25□□□□□ -1.57
SUB1-212ENST00000513013 TIAF1O95411 115 aa5.25□□□□□ -1.57
SUB1-212ENST00000513013 CYP27A1Q02318 531 aa5.25□□□□□ -1.57
SUB1-212ENST00000513013 ZNF394Q53GI3 561 aa5.25□□□□□ -1.57
SUB1-212ENST00000513013 VN1R5Q7Z5H4 357 aa5.25□□□□□ -1.57
SUB1-212ENST00000513013 KRTAP19-1Q8IUB9 90 aa5.25□□□□□ -1.57
SUB1-212ENST00000513013 FBXL6Q8N531 539 aa5.25□□□□□ -1.57
SUB1-212ENST00000513013 ASAP3Q8TDY4 903 aa5.25□□□□□ -1.57
SUB1-212ENST00000513013 CHRDQ9H2X0 955 aa5.25□□□□□ -1.57
SUB1-212ENST00000513013 FOXD3Q9UJU5 478 aaPredicted RBP5.25□□□□□ -1.57
SUB1-212ENST00000513013 TMA7Q9Y2S6 64 aaKnown RBP5.25□□□□□ -1.57
SUB1-212ENST00000513013 CYP11A1P05108 521 aa5.24□□□□□ -1.57
SUB1-212ENST00000513013 USP17L7P0C7H9 530 aa5.24□□□□□ -1.57
SUB1-212ENST00000513013 ESRRAP11474 423 aaPredicted RBP5.24□□□□□ -1.57
SUB1-212ENST00000513013 ACPPP15309 386 aa5.24□□□□□ -1.57
SUB1-212ENST00000513013 NFKBIBQ15653 356 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms