RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 AKAP11Q9UKA4 1901 aa19.15■□□□□ 0.66
SGCA-208ENST00000512526 PDE4AP27815 886 aa19.15■□□□□ 0.66
SGCA-208ENST00000512526 PPP4CP60510 307 aa19.15■□□□□ 0.66
SGCA-208ENST00000512526 ADGRA1Q86SQ6 560 aa19.15■□□□□ 0.66
SGCA-208ENST00000512526 VEZTQ9HBM0 779 aa19.15■□□□□ 0.66
SGCA-208ENST00000512526 USP40Q9NVE5 1235 aa19.15■□□□□ 0.66
SGCA-208ENST00000512526 CYP7A1P22680 504 aa19.14■□□□□ 0.65
SGCA-208ENST00000512526 BTDP43251 543 aa19.14■□□□□ 0.65
SGCA-208ENST00000512526 APLP1P51693 650 aa19.14■□□□□ 0.65
SGCA-208ENST00000512526 RHBDL3P58872 404 aa19.14■□□□□ 0.65
SGCA-208ENST00000512526 RASA3Q14644 834 aa19.14■□□□□ 0.65
SGCA-208ENST00000512526 SLC9C2Q5TAH2 1124 aa19.14■□□□□ 0.65
SGCA-208ENST00000512526 CENPQQ7L2Z9 268 aaPredicted RBP19.14■□□□□ 0.65
SGCA-208ENST00000512526 MAGEB6Q8N7X4 407 aa19.14■□□□□ 0.65
SGCA-208ENST00000512526 TCRBV5S4A2TA0A5A2 114 aa19.13■□□□□ 0.65
SGCA-208ENST00000512526 TCP10L2B9ZVM9 353 aa19.13■□□□□ 0.65
SGCA-208ENST00000512526 PDE6AP16499 860 aa19.13■□□□□ 0.65
SGCA-208ENST00000512526 HSPA6P17066 643 aa19.13■□□□□ 0.65
SGCA-208ENST00000512526 CACNB3P54284 484 aa19.13■□□□□ 0.65
SGCA-208ENST00000512526 PRAMEF18Q5VWM3 479 aa19.13■□□□□ 0.65
SGCA-208ENST00000512526 KBTBD3Q8NAB2 608 aa19.13■□□□□ 0.65
SGCA-208ENST00000512526 CDCA5Q96FF9 252 aa19.13■□□□□ 0.65
SGCA-208ENST00000512526 PPP2R3BQ9Y5P8 575 aa19.13■□□□□ 0.65
SGCA-208ENST00000512526 MAP4K4O95819 1239 aaPredicted RBP19.12■□□□□ 0.65
SGCA-208ENST00000512526 ADD2P35612 726 aa19.12■□□□□ 0.65
SGCA-208ENST00000512526 FAM83AQ86UY5 434 aa19.12■□□□□ 0.65
SGCA-208ENST00000512526 CCDC136Q96JN2 1154 aa19.12■□□□□ 0.65
SGCA-208ENST00000512526 IDI2Q9BXS1 227 aa19.12■□□□□ 0.65
SGCA-208ENST00000512526 FAM198AQ9UFP1 575 aa19.12■□□□□ 0.65
SGCA-208ENST00000512526 CNTNAP1P78357 1384 aa19.11■□□□□ 0.65
SGCA-208ENST00000512526 WDHD1O75717 1129 aaPredicted RBP19.11■□□□□ 0.65
SGCA-208ENST00000512526 NFIAQ12857 509 aa19.11■□□□□ 0.65
SGCA-208ENST00000512526 TNFAIP1Q13829 316 aa19.11■□□□□ 0.65
SGCA-208ENST00000512526 TEPSINQ96N21 525 aa19.11■□□□□ 0.65
SGCA-208ENST00000512526 TMOD2Q9NZR1 351 aa19.11■□□□□ 0.65
SGCA-208ENST00000512526 ZNF532Q9HCE3 1301 aa19.1■□□□□ 0.65
SGCA-208ENST00000512526 TMEM88BA6NKF7 163 aa19.1■□□□□ 0.65
SGCA-208ENST00000512526 CELF2O95319 508 aaKnown RBP19.1■□□□□ 0.65
SGCA-208ENST00000512526 BAG3O95817 575 aa19.1■□□□□ 0.65
SGCA-208ENST00000512526 CHGBP05060 677 aa19.1■□□□□ 0.65
SGCA-208ENST00000512526 UBE3CQ15386 1083 aa19.1■□□□□ 0.65
SGCA-208ENST00000512526 SLFNL1Q499Z3 407 aa19.1■□□□□ 0.65
SGCA-208ENST00000512526 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.1■□□□□ 0.65
SGCA-208ENST00000512526 AATFQ9NY61 560 aaKnown RBP eCLIP19.1■□□□□ 0.65
SGCA-208ENST00000512526 NPM3O75607 178 aaKnown RBP19.09■□□□□ 0.65
SGCA-208ENST00000512526 TNNI2P48788 182 aa19.09■□□□□ 0.65
SGCA-208ENST00000512526 DYNLL1P63167 89 aaKnown RBP19.09■□□□□ 0.65
SGCA-208ENST00000512526 ZFPM1Q8IX07 1006 aa19.09■□□□□ 0.65
SGCA-208ENST00000512526 SH3RF3Q8TEJ3 882 aaPredicted RBP19.09■□□□□ 0.65
SGCA-208ENST00000512526 FAM151AQ8WW52 585 aa19.09■□□□□ 0.65
SGCA-208ENST00000512526 RIOK1Q9BRS2 568 aaKnown RBP19.09■□□□□ 0.65
SGCA-208ENST00000512526 TMEM39BQ9GZU3 492 aa19.09■□□□□ 0.65
SGCA-208ENST00000512526 CREBZFQ9NS37 354 aa19.09■□□□□ 0.65
SGCA-208ENST00000512526 PPP4R2Q9NY27 417 aa19.09■□□□□ 0.65
SGCA-208ENST00000512526 RFX7Q2KHR2 1363 aa19.08■□□□□ 0.65
SGCA-208ENST00000512526 PLCG2P16885 1265 aa19.08■□□□□ 0.64
SGCA-208ENST00000512526 NBPF12Q5TAG4 269 aaPredicted RBP19.08■□□□□ 0.64
SGCA-208ENST00000512526 ZSCAN25Q6NSZ9 544 aa19.08■□□□□ 0.64
SGCA-208ENST00000512526 CDAN1Q8IWY9 1227 aa19.08■□□□□ 0.64
SGCA-208ENST00000512526 MIGA1Q8NAN2 632 aa19.08■□□□□ 0.64
SGCA-208ENST00000512526 EVI5LQ96CN4 794 aa19.08■□□□□ 0.64
SGCA-208ENST00000512526 NOL10Q9BSC4 688 aaKnown RBP19.08■□□□□ 0.64
SGCA-208ENST00000512526 ZNF408Q9H9D4 720 aa19.08■□□□□ 0.64
SGCA-208ENST00000512526 DDX4Q9NQI0 724 aaKnown RBP19.08■□□□□ 0.64
SGCA-208ENST00000512526 MYH13Q9UKX3 1938 aa19.08■□□□□ 0.64
SGCA-208ENST00000512526 ENTPD3O75355 529 aa19.07■□□□□ 0.64
SGCA-208ENST00000512526 RGS3P49796 1198 aa19.07■□□□□ 0.64
SGCA-208ENST00000512526 TCP10Q12799 353 aa19.07■□□□□ 0.64
SGCA-208ENST00000512526 SUPT20HL1Q3ZLR7 823 aa19.07■□□□□ 0.64
SGCA-208ENST00000512526 CERS3Q8IU89 383 aa19.07■□□□□ 0.64
SGCA-208ENST00000512526 RNF113AO15541 343 aaKnown RBP19.06■□□□□ 0.64
SGCA-208ENST00000512526 ZFYP08048 801 aaPredicted RBP19.06■□□□□ 0.64
SGCA-208ENST00000512526 HTRA3P83110 453 aa19.06■□□□□ 0.64
SGCA-208ENST00000512526 TEX11Q8IYF3 940 aa19.06■□□□□ 0.64
SGCA-208ENST00000512526 MAGEB6P1A0A0J9YX57 407 aa19.05■□□□□ 0.64
SGCA-208ENST00000512526 SH3BP5LQ7L8J4 393 aa19.05■□□□□ 0.64
SGCA-208ENST00000512526 SAPCD2Q86UD0 394 aa19.05■□□□□ 0.64
SGCA-208ENST00000512526 TICAM2Q86XR7 235 aa19.05■□□□□ 0.64
SGCA-208ENST00000512526 GBA2Q9HCG7 927 aaPredicted RBP19.05■□□□□ 0.64
SGCA-208ENST00000512526 TLL2Q9Y6L7 1015 aa19.05■□□□□ 0.64
SGCA-208ENST00000512526 FKBP1BP68106 108 aa19.04■□□□□ 0.64
SGCA-208ENST00000512526 PICALMQ13492 652 aa19.04■□□□□ 0.64
SGCA-208ENST00000512526 LRRFIP1Q32MZ4 808 aaKnown RBP19.04■□□□□ 0.64
SGCA-208ENST00000512526 C2orf69Q8N8R5 385 aa19.04■□□□□ 0.64
SGCA-208ENST00000512526 TGFBRAP1Q8WUH2 860 aa19.04■□□□□ 0.64
SGCA-208ENST00000512526 OSBP2Q969R2 916 aa19.04■□□□□ 0.64
SGCA-208ENST00000512526 FSD1Q9BTV5 496 aa19.04■□□□□ 0.64
SGCA-208ENST00000512526 PUS7LQ9H0K6 701 aaKnown RBP19.04■□□□□ 0.64
SGCA-208ENST00000512526 NF2P35240 595 aa19.03■□□□□ 0.64
SGCA-208ENST00000512526 MOB2Q70IA6 237 aa19.03■□□□□ 0.64
SGCA-208ENST00000512526 APPBP2Q92624 585 aa19.03■□□□□ 0.64
SGCA-208ENST00000512526 OSBPL5Q9H0X9 879 aaPredicted RBP19.03■□□□□ 0.64
SGCA-208ENST00000512526 RPAP1Q9BWH6 1393 aaPredicted RBP19.03■□□□□ 0.64
SGCA-208ENST00000512526 DDTLA6NHG4 134 aaPredicted RBP19.02■□□□□ 0.64
SGCA-208ENST00000512526 USP2O75604 605 aaPredicted RBP19.02■□□□□ 0.64
SGCA-208ENST00000512526 GSPT1P15170 499 aaKnown RBP19.02■□□□□ 0.64
SGCA-208ENST00000512526 MAP3K11Q16584 847 aa19.02■□□□□ 0.64
SGCA-208ENST00000512526 ZMYM1Q5SVZ6 1142 aa19.02■□□□□ 0.64
SGCA-208ENST00000512526 TTC22Q5TAA0 569 aa19.02■□□□□ 0.64
SGCA-208ENST00000512526 LCORLQ8N3X6 602 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms