RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 TCIRG1Q13488 830 aa11.9□□□□□ -0.5
SNF8-211ENST00000512243 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.9□□□□□ -0.5
SNF8-211ENST00000512243 SLC4A10Q6U841 1118 aa11.9□□□□□ -0.5
SNF8-211ENST00000512243 BICDL1Q6ZP65 573 aa11.9□□□□□ -0.5
SNF8-211ENST00000512243 FTSJ3Q8IY81 847 aaKnown RBP11.9□□□□□ -0.5
SNF8-211ENST00000512243 SETDB2Q96T68 719 aa11.9□□□□□ -0.5
SNF8-211ENST00000512243 ABCC4O15439 1325 aa11.89□□□□□ -0.51
SNF8-211ENST00000512243 ATP5J2-PTCD1G3V325 749 aa11.89□□□□□ -0.51
SNF8-211ENST00000512243 MMP10P09238 476 aa11.89□□□□□ -0.51
SNF8-211ENST00000512243 TRIM27P14373 513 aa11.89□□□□□ -0.51
SNF8-211ENST00000512243 NFIXQ14938 502 aa11.89□□□□□ -0.51
SNF8-211ENST00000512243 PARP10Q53GL7 1025 aa11.89□□□□□ -0.51
SNF8-211ENST00000512243 KDF1Q8NAX2 398 aaPredicted RBP11.89□□□□□ -0.51
SNF8-211ENST00000512243 ISCA1Q9BUE6 129 aa11.89□□□□□ -0.51
SNF8-211ENST00000512243 PARP3Q9Y6F1 533 aa11.89□□□□□ -0.51
SNF8-211ENST00000512243 IBTKQ9P2D0 1353 aaPredicted RBP11.89□□□□□ -0.51
SNF8-211ENST00000512243 UBN2Q6ZU65 1347 aa11.88□□□□□ -0.51
SNF8-211ENST00000512243 KIF13BQ9NQT8 1826 aa11.88□□□□□ -0.51
SNF8-211ENST00000512243 NPHP1O15259 732 aa11.88□□□□□ -0.51
SNF8-211ENST00000512243 PPFIA3O75145 1194 aa11.88□□□□□ -0.51
SNF8-211ENST00000512243 RRP1P56182 461 aaKnown RBP11.88□□□□□ -0.51
SNF8-211ENST00000512243 PPP1R42Q7Z4L9 355 aa11.88□□□□□ -0.51
SNF8-211ENST00000512243 ZNF34Q8IZ26 560 aa11.88□□□□□ -0.51
SNF8-211ENST00000512243 LINS1Q8NG48 757 aa11.88□□□□□ -0.51
SNF8-211ENST00000512243 NYXQ9GZU5 481 aa11.88□□□□□ -0.51
SNF8-211ENST00000512243 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
SNF8-211ENST00000512243 ANKRD31Q8N7Z5 1873 aa11.88□□□□□ -0.51
SNF8-211ENST00000512243 LRP5O75197 1615 aa11.88□□□□□ -0.51
SNF8-211ENST00000512243 DDX60Q8IY21 1712 aaKnown RBP11.88□□□□□ -0.51
SNF8-211ENST00000512243 FAM177BA6PVY3 158 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 POLRMTO00411 1230 aaKnown RBP11.87□□□□□ -0.51
SNF8-211ENST00000512243 ALDH1L1O75891 902 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 IGKV5-2P06315 115 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 TM4SF1P30408 202 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 CCT4P50991 539 aaKnown RBP11.87□□□□□ -0.51
SNF8-211ENST00000512243 DDR1Q08345 913 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 TRIM28Q13263 835 aaKnown RBP11.87□□□□□ -0.51
SNF8-211ENST00000512243 BEND3Q5T5X7 828 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 NLRP10Q86W26 655 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 NBPF5PQ86XG9 351 aaPredicted RBP11.87□□□□□ -0.51
SNF8-211ENST00000512243 DZIP1LQ8IYY4 767 aaKnown RBP11.87□□□□□ -0.51
SNF8-211ENST00000512243 CCDC191Q8NCU4 936 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 SRCIN1Q9C0H9 1055 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 SPON1Q9HCB6 807 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 TNNQ9UQP3 1299 aa11.87□□□□□ -0.51
SNF8-211ENST00000512243 RNF123Q5XPI4 1314 aa11.86□□□□□ -0.51
SNF8-211ENST00000512243 PLIN1O60240 522 aa11.86□□□□□ -0.51
SNF8-211ENST00000512243 PTGIRP43119 386 aa11.86□□□□□ -0.51
SNF8-211ENST00000512243 PTSQ03393 145 aa11.86□□□□□ -0.51
SNF8-211ENST00000512243 CWF19L2Q2TBE0 894 aaKnown RBP11.86□□□□□ -0.51
SNF8-211ENST00000512243 CNBD1Q8NA66 436 aa11.86□□□□□ -0.51
SNF8-211ENST00000512243 UTP14AQ9BVJ6 771 aaKnown RBP11.86□□□□□ -0.51
SNF8-211ENST00000512243 TNRC6CQ9HCJ0 1690 aaKnown RBP11.85□□□□□ -0.51
SNF8-211ENST00000512243 NTSR2O95665 410 aa11.85□□□□□ -0.51
SNF8-211ENST00000512243 SERPINB2P05120 415 aa11.85□□□□□ -0.51
SNF8-211ENST00000512243 GTF2E1P29083 439 aaPredicted RBP11.85□□□□□ -0.51
SNF8-211ENST00000512243 ST5P78524 1137 aa11.85□□□□□ -0.51
SNF8-211ENST00000512243 RNF20Q5VTR2 975 aa11.85□□□□□ -0.51
SNF8-211ENST00000512243 SUSD4Q5VX71 490 aa11.85□□□□□ -0.51
SNF8-211ENST00000512243 GDPD2Q9HCC8 539 aa11.85□□□□□ -0.51
SNF8-211ENST00000512243 TRMT112Q9UI30 125 aaKnown RBP11.85□□□□□ -0.51
SNF8-211ENST00000512243 PCDHB11Q9Y5F2 797 aa11.85□□□□□ -0.51
SNF8-211ENST00000512243 C10orf71Q711Q0 1435 aa11.85□□□□□ -0.51
SNF8-211ENST00000512243 CACNA1SQ13698 1873 aa11.85□□□□□ -0.51
SNF8-211ENST00000512243 COL11A2P13942 1736 aaPredicted RBP11.84□□□□□ -0.51
SNF8-211ENST00000512243 SCTRP47872 440 aa11.84□□□□□ -0.51
SNF8-211ENST00000512243 INSM1Q01101 510 aaPredicted RBP11.84□□□□□ -0.51
SNF8-211ENST00000512243 IRF5Q13568 498 aa11.84□□□□□ -0.51
SNF8-211ENST00000512243 GCKRQ14397 625 aa11.84□□□□□ -0.51
SNF8-211ENST00000512243 PDE3AQ14432 1141 aa11.84□□□□□ -0.51
SNF8-211ENST00000512243 INTS3Q68E01 1043 aaKnown RBP11.84□□□□□ -0.51
SNF8-211ENST00000512243 TPTE2Q6XPS3 522 aa11.84□□□□□ -0.51
SNF8-211ENST00000512243 ITPRIPQ8IWB1 547 aa11.84□□□□□ -0.51
SNF8-211ENST00000512243 TMEM57Q8N5G2 664 aa11.84□□□□□ -0.51
SNF8-211ENST00000512243 RNF217Q8TC41 542 aa11.84□□□□□ -0.51
SNF8-211ENST00000512243 PANK1Q8TE04 598 aa11.84□□□□□ -0.51
SNF8-211ENST00000512243 PRM3Q9NNZ6 103 aa11.84□□□□□ -0.51
SNF8-211ENST00000512243 SUPT16HQ9Y5B9 1047 aaKnown RBP11.84□□□□□ -0.51
SNF8-211ENST00000512243 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
SNF8-211ENST00000512243 SH3TC1Q8TE82 1336 aa11.84□□□□□ -0.51
SNF8-211ENST00000512243 ABCC12Q96J65 1359 aa11.83□□□□□ -0.52
SNF8-211ENST00000512243 PCCAP05165 728 aaPredicted RBP11.83□□□□□ -0.52
SNF8-211ENST00000512243 RLBP1P12271 317 aa11.83□□□□□ -0.52
SNF8-211ENST00000512243 MCCD1P59942 119 aaPredicted RBP11.83□□□□□ -0.52
SNF8-211ENST00000512243 FOXD4L5Q5VV16 416 aaPredicted RBP11.83□□□□□ -0.52
SNF8-211ENST00000512243 PRR5LQ6MZQ0 368 aa11.83□□□□□ -0.52
SNF8-211ENST00000512243 ZBTB38Q8NAP3 1195 aaPredicted RBP11.83□□□□□ -0.52
SNF8-211ENST00000512243 ZNF592Q92610 1267 aa11.83□□□□□ -0.52
SNF8-211ENST00000512243 C9orf78Q9NZ63 289 aaPredicted RBP11.83□□□□□ -0.52
SNF8-211ENST00000512243 RIC1Q4ADV7 1423 aa11.83□□□□□ -0.52
SNF8-211ENST00000512243 GRM8O00222 908 aa11.82□□□□□ -0.52
SNF8-211ENST00000512243 HSP90B1P14625 803 aaKnown RBP11.82□□□□□ -0.52
SNF8-211ENST00000512243 ABL2P42684 1182 aa11.82□□□□□ -0.52
SNF8-211ENST00000512243 ERVK-9P63128 1117 aa11.82□□□□□ -0.52
SNF8-211ENST00000512243 CC2D2BQ6DHV5 1058 aa11.82□□□□□ -0.52
SNF8-211ENST00000512243 UBE3BQ7Z3V4 1068 aa11.82□□□□□ -0.52
SNF8-211ENST00000512243 PPP1R1BQ9UD71 204 aaPredicted RBP11.82□□□□□ -0.52
SNF8-211ENST00000512243 KIAA1551Q9HCM1 1747 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms