RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 MBTPS1Q14703 1052 aa6.21□□□□□ -1.42
CALCOCO2-220ENST00000511816 SF3A1Q15459 793 aaKnown RBP6.21□□□□□ -1.42
CALCOCO2-220ENST00000511816 ZNF394Q53GI3 561 aa6.21□□□□□ -1.42
CALCOCO2-220ENST00000511816 NAALADL2Q58DX5 795 aa6.21□□□□□ -1.42
CALCOCO2-220ENST00000511816 SNAP47Q5SQN1 464 aa6.21□□□□□ -1.42
CALCOCO2-220ENST00000511816 ACAD11Q709F0 780 aa6.21□□□□□ -1.42
CALCOCO2-220ENST00000511816 ILDR2Q71H61 639 aa6.21□□□□□ -1.42
CALCOCO2-220ENST00000511816 KIAA0825Q8IV33 1275 aa6.21□□□□□ -1.42
CALCOCO2-220ENST00000511816 TRIM37O94972 964 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 BPNT1O95861 308 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 PROCP04070 461 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 ITGB2P05107 769 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 GLB1P16278 677 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 BMP6P22004 513 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 RAD51AP2Q09MP3 1159 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 CAMK2GQ13555 558 aaPredicted RBP6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 ADAMTSL4Q6UY14 1074 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 TRIM42Q8IWZ5 723 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 TMEM130Q8N3G9 435 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 PHC3Q8NDX5 983 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 KCNB2Q92953 911 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 KLHDC7BQ96G42 594 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 ACSBG1Q96GR2 724 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 KRT82Q9NSB4 513 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 PCDHGB7Q9Y5F8 929 aa6.2□□□□□ -1.42
CALCOCO2-220ENST00000511816 PF4P02776 101 aa6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 SLFN14P0C7P3 912 aa6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 IREB2P48200 963 aaKnown RBP6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 NLRP12P59046 1061 aa6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 RACK1P63244 317 aaKnown RBP6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 PDE3AQ14432 1141 aa6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 SLC43A3Q8NBI5 491 aa6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 GALNT11Q8NCW6 608 aa6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 WFDC12Q8WWY7 111 aa6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 TRIM56Q9BRZ2 755 aaKnown RBP6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 USP26Q9BXU7 913 aa6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 ACBD3Q9H3P7 528 aa6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 COPRSQ9NQ92 184 aa6.19□□□□□ -1.42
CALCOCO2-220ENST00000511816 F8W735 103 aaPredicted RBP6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 SART1O43290 800 aaKnown RBP6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 PAGE1O75459 146 aa6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 MAOBP27338 520 aa6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 COL9A2Q14055 689 aaPredicted RBP6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 MAP1SQ66K74 1059 aaPredicted RBP6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 FDX2Q6P4F2 183 aa6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 GOLM1Q8NBJ4 401 aa6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 ZNF296Q8WUU4 475 aaPredicted RBP6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 TP53INP1Q96A56 240 aa6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 GPRASP2Q96D09 838 aa6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 RHOVQ96L33 236 aa6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 NT5C1AQ9BXI3 368 aa6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 RNF208Q9H0X6 261 aa6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 RAD18Q9NS91 495 aa6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 TLR6Q9Y2C9 796 aa6.18□□□□□ -1.42
CALCOCO2-220ENST00000511816 TFE3P19532 575 aaPredicted RBP6.17□□□□□ -1.42
CALCOCO2-220ENST00000511816 ZNF252P-AS1Q0IIN9 211 aa6.17□□□□□ -1.42
CALCOCO2-220ENST00000511816 DOC2BQ14184 412 aa6.17□□□□□ -1.42
CALCOCO2-220ENST00000511816 FOXD4L6Q3SYB3 417 aaPredicted RBP6.17□□□□□ -1.42
CALCOCO2-220ENST00000511816 EXOSC6Q5RKV6 272 aaKnown RBP6.17□□□□□ -1.42
CALCOCO2-220ENST00000511816 FOXD4L3Q6VB84 417 aaPredicted RBP6.17□□□□□ -1.42
CALCOCO2-220ENST00000511816 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.17□□□□□ -1.42
CALCOCO2-220ENST00000511816 JARID2Q92833 1246 aaPredicted RBP6.17□□□□□ -1.42
CALCOCO2-220ENST00000511816 RUSC1Q9BVN2 902 aa6.17□□□□□ -1.42
CALCOCO2-220ENST00000511816 CYP4F12Q9HCS2 524 aa6.17□□□□□ -1.42
CALCOCO2-220ENST00000511816 KCNQ5Q9NR82 932 aa6.17□□□□□ -1.42
CALCOCO2-220ENST00000511816 F6X3S4 739 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 NOS3P29474 1203 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 ARID5AQ03989 594 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 FAM160A1Q05DH4 1040 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 APOBRQ0VD83 1088 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 PAK2Q13177 524 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 MPP2Q14168 576 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 CWF19L2Q2TBE0 894 aaKnown RBP6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 NUTM2GQ5VZR2 741 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 ANKRD34AQ69YU3 496 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 FBXL19Q6PCT2 694 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 SREK1Q8WXA9 508 aaKnown RBP6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 GATAD2BQ8WXI9 593 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 NKD1Q969G9 470 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 PCDHA4Q9UN74 947 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 SYNGAP1Q96PV0 1343 aa6.16□□□□□ -1.42
CALCOCO2-220ENST00000511816 K7ELQ4 463 aaPredicted RBP6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 DDX3YO15523 660 aaKnown RBP6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 GAS2O43903 313 aaKnown RBP6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 GREM1O60565 184 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 GJA8P48165 433 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 RPL6Q02878 288 aaKnown RBP6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 MLECQ14165 292 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 UVSSAQ2YD98 709 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 HGSNATQ68CP4 663 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 FAM196AQ6ZSG2 479 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 HDXQ7Z353 690 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 PDZD3Q86UT5 571 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 AGGF1Q8N302 714 aaeCLIP6.15□□□□□ -1.429e-6■■□□□ 11.6
CALCOCO2-220ENST00000511816 UBASH3BQ8TF42 649 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 SEC16BQ96JE7 1060 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 DRC1Q96MC2 740 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 ZC3H12CQ9C0D7 883 aaKnown RBP6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 TPSG1Q9NRR2 321 aa6.15□□□□□ -1.42
CALCOCO2-220ENST00000511816 ADAMTS1Q9UHI8 967 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms