RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 OGDHLQ9ULD0 1010 aa13.98□□□□□ -0.17
SNF8-207ENST00000509995 LTBP2Q14767 1821 aa13.98□□□□□ -0.17
SNF8-207ENST00000509995 HMGCRP04035 888 aa13.97□□□□□ -0.17
SNF8-207ENST00000509995 C15orf52Q6ZUT6 534 aaKnown RBP13.97□□□□□ -0.17
SNF8-207ENST00000509995 ZNF804AQ7Z570 1209 aa13.97□□□□□ -0.17
SNF8-207ENST00000509995 PTPRFP10586 1907 aa13.96□□□□□ -0.17
SNF8-207ENST00000509995 SNAP23O00161 211 aa13.96□□□□□ -0.17
SNF8-207ENST00000509995 CHRNDQ07001 517 aa13.96□□□□□ -0.17
SNF8-207ENST00000509995 GPAT2Q6NUI2 795 aa13.96□□□□□ -0.17
SNF8-207ENST00000509995 USP38Q8NB14 1042 aa13.96□□□□□ -0.17
SNF8-207ENST00000509995 TTF2Q9UNY4 1162 aaKnown RBP13.96□□□□□ -0.17
SNF8-207ENST00000509995 ARIH1Q9Y4X5 557 aaPredicted RBP13.96□□□□□ -0.17
SNF8-207ENST00000509995 AK9Q5TCS8 1911 aa13.96□□□□□ -0.18
SNF8-207ENST00000509995 COL6A1P12109 1028 aa13.95□□□□□ -0.18
SNF8-207ENST00000509995 INPP5BP32019 993 aa13.95□□□□□ -0.18
SNF8-207ENST00000509995 LRRC26Q2I0M4 334 aa13.95□□□□□ -0.18
SNF8-207ENST00000509995 COA7Q96BR5 231 aa13.95□□□□□ -0.18
SNF8-207ENST00000509995 HOOK2Q96ED9 719 aa13.95□□□□□ -0.18
SNF8-207ENST00000509995 SNX27Q96L92 541 aa13.95□□□□□ -0.18
SNF8-207ENST00000509995 MPHOSPH8Q99549 860 aa13.95□□□□□ -0.18
SNF8-207ENST00000509995 LBHD1Q9BQE6 289 aaPredicted RBP13.95□□□□□ -0.18
SNF8-207ENST00000509995 HMX1Q9NP08 348 aaPredicted RBP13.95□□□□□ -0.18
SNF8-207ENST00000509995 XIRP2A4UGR9 3374 aa13.95□□□□□ -0.18
SNF8-207ENST00000509995 CHL1O00533 1208 aa13.94□□□□□ -0.18
SNF8-207ENST00000509995 RIPK4P57078 832 aa13.94□□□□□ -0.18
SNF8-207ENST00000509995 MFSD14BQ5SR56 506 aa13.94□□□□□ -0.18
SNF8-207ENST00000509995 DCAF15Q66K64 600 aa13.94□□□□□ -0.18
SNF8-207ENST00000509995 RPAP1Q9BWH6 1393 aaPredicted RBP13.94□□□□□ -0.18
SNF8-207ENST00000509995 ITGA6P23229 1130 aa13.93□□□□□ -0.18
SNF8-207ENST00000509995 CRKP46108 304 aa13.93□□□□□ -0.18
SNF8-207ENST00000509995 CACNB3P54284 484 aa13.93□□□□□ -0.18
SNF8-207ENST00000509995 TRIM32Q13049 653 aa13.93□□□□□ -0.18
SNF8-207ENST00000509995 METTL22Q9BUU2 404 aaPredicted RBP13.93□□□□□ -0.18
SNF8-207ENST00000509995 ZNF341Q9BYN7 854 aa13.93□□□□□ -0.18
SNF8-207ENST00000509995 PNNQ9H307 717 aaKnown RBP13.93□□□□□ -0.18
SNF8-207ENST00000509995 PHAXQ9H814 394 aaKnown RBP13.93□□□□□ -0.18
SNF8-207ENST00000509995 FRMPD3Q5JV73 1810 aa13.92□□□□□ -0.18
SNF8-207ENST00000509995 SMAD3P84022 425 aaKnown RBP13.92□□□□□ -0.18
SNF8-207ENST00000509995 LMOD3Q0VAK6 560 aa13.92□□□□□ -0.18
SNF8-207ENST00000509995 FAM83AQ86UY5 434 aa13.92□□□□□ -0.18
SNF8-207ENST00000509995 ADAMTS19Q8TE59 1207 aa13.92□□□□□ -0.18
SNF8-207ENST00000509995 HCN4Q9Y3Q4 1203 aa13.92□□□□□ -0.18
SNF8-207ENST00000509995 MUC6Q6W4X9 2439 aa13.92□□□□□ -0.18
SNF8-207ENST00000509995 TAF5LO75529 589 aa13.91□□□□□ -0.18
SNF8-207ENST00000509995 MIGA2Q7L4E1 593 aa13.91□□□□□ -0.18
SNF8-207ENST00000509995 SMCR8Q8TEV9 937 aaPredicted RBP13.91□□□□□ -0.18
SNF8-207ENST00000509995 UHRF1Q96T88 793 aaPredicted RBP13.91□□□□□ -0.18
SNF8-207ENST00000509995 C1QTNF1Q9BXJ1 281 aa13.91□□□□□ -0.18
SNF8-207ENST00000509995 PLXNB2O15031 1838 aa13.91□□□□□ -0.18
SNF8-207ENST00000509995 CXCL11O14625 94 aa13.9□□□□□ -0.18
SNF8-207ENST00000509995 SHHQ15465 462 aa13.9□□□□□ -0.18
SNF8-207ENST00000509995 NOL9Q5SY16 702 aaKnown RBP13.9□□□□□ -0.18
SNF8-207ENST00000509995 ATXN2LQ8WWM7 1075 aaKnown RBP13.9□□□□□ -0.18
SNF8-207ENST00000509995 ZNF112Q9UJU3 913 aa13.9□□□□□ -0.18
SNF8-207ENST00000509995 SLC45A1Q9Y2W3 748 aa13.9□□□□□ -0.18
SNF8-207ENST00000509995 A0A0G2JLL6 359 aaPredicted RBP13.89□□□□□ -0.19
SNF8-207ENST00000509995 C9orf50Q5SZB4 431 aa13.89□□□□□ -0.19
SNF8-207ENST00000509995 MAP3K21Q5TCX8 1036 aa13.89□□□□□ -0.19
SNF8-207ENST00000509995 FKBP1CQ5VVH2 108 aa13.89□□□□□ -0.19
SNF8-207ENST00000509995 DUSP27Q5VZP5 1158 aa13.89□□□□□ -0.19
SNF8-207ENST00000509995 FASTKD5Q7L8L6 764 aaKnown RBP13.89□□□□□ -0.19
SNF8-207ENST00000509995 PRRT2Q7Z6L0 340 aaPredicted RBP13.89□□□□□ -0.19
SNF8-207ENST00000509995 TMOD2Q9NZR1 351 aa13.89□□□□□ -0.19
SNF8-207ENST00000509995 LAS1LQ9Y4W2 734 aaKnown RBP13.89□□□□□ -0.19
SNF8-207ENST00000509995 IGKV5-2P06315 115 aa13.88□□□□□ -0.19
SNF8-207ENST00000509995 FAM110CQ1W6H9 321 aa13.88□□□□□ -0.19
SNF8-207ENST00000509995 ANKRD13CQ8N6S4 541 aa13.88□□□□□ -0.19
SNF8-207ENST00000509995 ASB2Q96Q27 587 aa13.88□□□□□ -0.19
SNF8-207ENST00000509995 CLSPNQ9HAW4 1339 aa13.88□□□□□ -0.19
SNF8-207ENST00000509995 PHIPQ8WWQ0 1821 aa13.87□□□□□ -0.19
SNF8-207ENST00000509995 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
SNF8-207ENST00000509995 TMPOP42166 694 aaKnown RBP13.87□□□□□ -0.19
SNF8-207ENST00000509995 UBE3BQ7Z3V4 1068 aa13.87□□□□□ -0.19
SNF8-207ENST00000509995 TDRD7Q8NHU6 1098 aaKnown RBP13.87□□□□□ -0.19
SNF8-207ENST00000509995 TRIB2Q92519 343 aa13.87□□□□□ -0.19
SNF8-207ENST00000509995 THEGQ9P2T0 379 aa13.87□□□□□ -0.19
SNF8-207ENST00000509995 MAP3K2Q9Y2U5 619 aa13.87□□□□□ -0.19
SNF8-207ENST00000509995 MYO9BQ13459 2157 aa13.86□□□□□ -0.19
SNF8-207ENST00000509995 DDX58O95786 925 aaKnown RBP13.86□□□□□ -0.19
SNF8-207ENST00000509995 HDLBPQ00341 1268 aaKnown RBP13.86□□□□□ -0.19
SNF8-207ENST00000509995 GADL1Q6ZQY3 521 aa13.86□□□□□ -0.19
SNF8-207ENST00000509995 TEKT1Q969V4 418 aa13.86□□□□□ -0.19
SNF8-207ENST00000509995 PLA2G12BQ9BX93 195 aa13.86□□□□□ -0.19
SNF8-207ENST00000509995 PRKAG2Q9UGJ0 569 aa13.86□□□□□ -0.19
SNF8-207ENST00000509995 GJD2Q9UKL4 321 aa13.86□□□□□ -0.19
SNF8-207ENST00000509995 TCF20Q9UGU0 1960 aaKnown RBP13.85□□□□□ -0.19
SNF8-207ENST00000509995 GRIN2CQ14957 1233 aa13.85□□□□□ -0.19
SNF8-207ENST00000509995 GRIK5Q16478 980 aa13.85□□□□□ -0.19
SNF8-207ENST00000509995 ZDHHC15Q96MV8 337 aa13.85□□□□□ -0.19
SNF8-207ENST00000509995 DOCK2Q92608 1830 aa13.85□□□□□ -0.19
SNF8-207ENST00000509995 CACNA1AO00555 2505 aa13.85□□□□□ -0.19
SNF8-207ENST00000509995 DOCK1Q14185 1865 aa13.84□□□□□ -0.19
SNF8-207ENST00000509995 REV3LO60673 3130 aa13.84□□□□□ -0.19
SNF8-207ENST00000509995 H7C1W4 665 aa13.84□□□□□ -0.19
SNF8-207ENST00000509995 CSF1RP07333 972 aa13.84□□□□□ -0.19
SNF8-207ENST00000509995 MRPS5P82675 430 aaKnown RBP13.84□□□□□ -0.19
SNF8-207ENST00000509995 CWF19L2Q2TBE0 894 aaKnown RBP13.84□□□□□ -0.19
SNF8-207ENST00000509995 LHX8Q68G74 356 aa13.84□□□□□ -0.19
SNF8-207ENST00000509995 ZHX2Q9Y6X8 837 aa13.84□□□□□ -0.19
SNF8-207ENST00000509995 ANKRD18BA2A2Z9 1011 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms