RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 CACNB3P54284 484 aa12.55□□□□□ -0.4
PTPN20-220ENST00000508715 DYNLL1P63167 89 aaKnown RBP12.55□□□□□ -0.4
PTPN20-220ENST00000508715 TTF1Q15361 905 aaPredicted RBP12.55□□□□□ -0.4
PTPN20-220ENST00000508715 SLC9C2Q5TAH2 1124 aa12.55□□□□□ -0.4
PTPN20-220ENST00000508715 ANGEL2Q5VTE6 544 aaKnown RBP12.55□□□□□ -0.4
PTPN20-220ENST00000508715 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
PTPN20-220ENST00000508715 LDHDQ86WU2 507 aa12.55□□□□□ -0.4
PTPN20-220ENST00000508715 GGA3Q9NZ52 723 aa12.55□□□□□ -0.4
PTPN20-220ENST00000508715 ZNF70Q9UC06 446 aaPredicted RBP12.55□□□□□ -0.4
PTPN20-220ENST00000508715 ZNF532Q9HCE3 1301 aa12.55□□□□□ -0.4
PTPN20-220ENST00000508715 CNTNAP1P78357 1384 aa12.55□□□□□ -0.4
PTPN20-220ENST00000508715 DDX60LQ5H9U9 1706 aaKnown RBP12.54□□□□□ -0.4
PTPN20-220ENST00000508715 IGSF3O75054 1194 aa12.54□□□□□ -0.4
PTPN20-220ENST00000508715 WDHD1O75717 1129 aaPredicted RBP12.54□□□□□ -0.4
PTPN20-220ENST00000508715 TOMM70O94826 608 aa12.54□□□□□ -0.4
PTPN20-220ENST00000508715 CYP7A1P22680 504 aa12.54□□□□□ -0.4
PTPN20-220ENST00000508715 BTDP43251 543 aa12.54□□□□□ -0.4
PTPN20-220ENST00000508715 PPP4CP60510 307 aa12.54□□□□□ -0.4
PTPN20-220ENST00000508715 MAP3K12Q12852 859 aa12.54□□□□□ -0.4
PTPN20-220ENST00000508715 NFIAQ12857 509 aa12.54□□□□□ -0.4
PTPN20-220ENST00000508715 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
PTPN20-220ENST00000508715 ZC3H15Q8WU90 426 aaKnown RBP12.54□□□□□ -0.4
PTPN20-220ENST00000508715 RIOK1Q9BRS2 568 aaKnown RBP12.54□□□□□ -0.4
PTPN20-220ENST00000508715 GLIS2Q9BZE0 524 aaPredicted RBP12.54□□□□□ -0.4
PTPN20-220ENST00000508715 GTF3C3Q9Y5Q9 886 aa12.54□□□□□ -0.4
PTPN20-220ENST00000508715 ADM5C9JUS6 153 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 TRAF5O00463 557 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 SDSP20132 328 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 RGS3P49796 1198 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 UBE3CQ15386 1083 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 CHADLQ6NUI6 762 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 ZFPM1Q8IX07 1006 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 MIGA1Q8NAN2 632 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 RBM46Q8TBY0 533 aaKnown RBP12.53□□□□□ -0.4
PTPN20-220ENST00000508715 SH3RF3Q8TEJ3 882 aaPredicted RBP12.53□□□□□ -0.4
PTPN20-220ENST00000508715 OSBP2Q969R2 916 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 EVI5LQ96CN4 794 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 SEC62Q99442 399 aaKnown RBP12.53□□□□□ -0.4
PTPN20-220ENST00000508715 PUS7LQ9H0K6 701 aaKnown RBP12.53□□□□□ -0.4
PTPN20-220ENST00000508715 DDX4Q9NQI0 724 aaKnown RBP12.53□□□□□ -0.4
PTPN20-220ENST00000508715 AATFQ9NY61 560 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPN20-220ENST00000508715 FAM198AQ9UFP1 575 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 CLEC11AQ9Y240 323 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 PITPNM2Q9BZ72 1349 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 NAV1Q8NEY1 1877 aa12.53□□□□□ -0.4
PTPN20-220ENST00000508715 RNF113AO15541 343 aaKnown RBP12.52□□□□□ -0.41
PTPN20-220ENST00000508715 LDHCP07864 332 aa12.52□□□□□ -0.41
PTPN20-220ENST00000508715 GSTO1P78417 241 aa12.52□□□□□ -0.41
PTPN20-220ENST00000508715 ZMYM1Q5SVZ6 1142 aa12.52□□□□□ -0.41
PTPN20-220ENST00000508715 PRAMEF18Q5VWM3 479 aa12.52□□□□□ -0.41
PTPN20-220ENST00000508715 USP48Q86UV5 1035 aa12.52□□□□□ -0.41
PTPN20-220ENST00000508715 CNTROBQ8N137 903 aa12.52□□□□□ -0.41
PTPN20-220ENST00000508715 LCORLQ8N3X6 602 aa12.52□□□□□ -0.41
PTPN20-220ENST00000508715 TEPSINQ96N21 525 aa12.52□□□□□ -0.41
PTPN20-220ENST00000508715 IL25Q9H293 177 aa12.52□□□□□ -0.41
PTPN20-220ENST00000508715 USP40Q9NVE5 1235 aa12.52□□□□□ -0.41
PTPN20-220ENST00000508715 PASKQ96RG2 1323 aa12.52□□□□□ -0.41
PTPN20-220ENST00000508715 SSC5DA1L4H1 1573 aa12.52□□□□□ -0.41
PTPN20-220ENST00000508715 PAPPA2Q9BXP8 1791 aa12.51□□□□□ -0.41
PTPN20-220ENST00000508715 M0R2C6 588 aa12.51□□□□□ -0.41
PTPN20-220ENST00000508715 SH3BP5LQ7L8J4 393 aa12.51□□□□□ -0.41
PTPN20-220ENST00000508715 FSD1Q9BTV5 496 aa12.51□□□□□ -0.41
PTPN20-220ENST00000508715 IDI2Q9BXS1 227 aa12.51□□□□□ -0.41
PTPN20-220ENST00000508715 VEZTQ9HBM0 779 aa12.51□□□□□ -0.41
PTPN20-220ENST00000508715 A0A0D9SFI3 127 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 TRIM6-TRIM34B2RNG4 842 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 TCP10L2B9ZVM9 353 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 FOXP2O15409 715 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 PRKAB2O43741 272 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 SLURP2P0DP57 97 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 RASA3Q14644 834 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 FKBP1CQ5VVH2 108 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 KRT26Q7Z3Y9 468 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 SMC1BQ8NDV3 1235 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 APPBP2Q92624 585 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 RILPL2Q969X0 211 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 DCPSQ96C86 337 aaKnown RBP12.5□□□□□ -0.41
PTPN20-220ENST00000508715 FAM227BQ96M60 508 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPN20-220ENST00000508715 TMEM39BQ9GZU3 492 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 DEFB129Q9H1M3 183 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 ARMT1Q9H993 441 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 MKRN1Q9UHC7 482 aaKnown RBP12.5□□□□□ -0.41
PTPN20-220ENST00000508715 OTOFQ9HC10 1997 aa12.5□□□□□ -0.41
PTPN20-220ENST00000508715 SMIM22K7EJ46 135 aa12.49□□□□□ -0.41
PTPN20-220ENST00000508715 MBD4O95243 580 aa12.49□□□□□ -0.41
PTPN20-220ENST00000508715 EVX2Q03828 476 aa12.49□□□□□ -0.41
PTPN20-220ENST00000508715 NMIQ13287 307 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-220ENST00000508715 TMED8Q6PL24 325 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-220ENST00000508715 CCDC129Q6ZRS4 1044 aa12.49□□□□□ -0.41
PTPN20-220ENST00000508715 CDC37L1Q7L3B6 337 aa12.49□□□□□ -0.41
PTPN20-220ENST00000508715 APOBEC3FQ8IUX4 373 aaKnown RBP12.49□□□□□ -0.41
PTPN20-220ENST00000508715 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
PTPN20-220ENST00000508715 ATRNL1Q5VV63 1379 aa12.48□□□□□ -0.41
PTPN20-220ENST00000508715 MAGEB6P1A0A0J9YX57 407 aa12.48□□□□□ -0.41
PTPN20-220ENST00000508715 DDTLA6NHG4 134 aaPredicted RBP12.48□□□□□ -0.41
PTPN20-220ENST00000508715 MYO1BO43795 1136 aa12.48□□□□□ -0.41
PTPN20-220ENST00000508715 NPM3O75607 178 aaKnown RBP12.48□□□□□ -0.41
PTPN20-220ENST00000508715 ZFYP08048 801 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms