RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
HMGCLL1-208ENST00000508459 PSMA5P28066 241 aa17.19■□□□□ 0.34
HMGCLL1-208ENST00000508459 CXCL9Q07325 125 aa17.19■□□□□ 0.34
HMGCLL1-208ENST00000508459 TBC1D32Q96NH3 1257 aa17.19■□□□□ 0.34
HMGCLL1-208ENST00000508459 PUS7LQ9H0K6 701 aaKnown RBP17.19■□□□□ 0.34
HMGCLL1-208ENST00000508459 NAPBQ9H115 298 aa17.19■□□□□ 0.34
HMGCLL1-208ENST00000508459 RNF181Q9P0P0 153 aa17.19■□□□□ 0.34
HMGCLL1-208ENST00000508459 SBF1O95248 1867 aa17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 H7C1D1 291 aa17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 RAD17O75943 681 aa17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 HSPD1P10809 573 aaKnown RBP17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 CRKP46108 304 aa17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 RASSF7Q02833 373 aa17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 DLGAP5Q15398 846 aa17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 KIAA0825Q8IV33 1275 aa17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 LSG1Q9H089 658 aaKnown RBP17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 RNF41Q9H4P4 317 aaPredicted RBP17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 ARPP21Q9UBL0 812 aaPredicted RBP17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 SLC4A4Q9Y6R1 1079 aa17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 MYO5AQ9Y4I1 1855 aaKnown RBP17.18■□□□□ 0.34
HMGCLL1-208ENST00000508459 SCN9AQ15858 1988 aa17.17■□□□□ 0.34
HMGCLL1-208ENST00000508459 YBX3P16989 372 aaKnown RBP eCLIP17.17■□□□□ 0.34
HMGCLL1-208ENST00000508459 LMOD1P29536 600 aaPredicted RBP17.17■□□□□ 0.34
HMGCLL1-208ENST00000508459 HSPA4P34932 840 aa17.17■□□□□ 0.34
HMGCLL1-208ENST00000508459 USP5P45974 858 aa17.17■□□□□ 0.34
HMGCLL1-208ENST00000508459 TDO2P48775 406 aa17.17■□□□□ 0.34
HMGCLL1-208ENST00000508459 RBM5P52756 815 aaKnown RBP eCLIP17.17■□□□□ 0.34
HMGCLL1-208ENST00000508459 FKBP1CQ5VVH2 108 aa17.17■□□□□ 0.34
HMGCLL1-208ENST00000508459 GMLQ99445 158 aa17.17■□□□□ 0.34
HMGCLL1-208ENST00000508459 RIOK1Q9BRS2 568 aaKnown RBP17.17■□□□□ 0.34
HMGCLL1-208ENST00000508459 M0R2C6 588 aa17.16■□□□□ 0.34
HMGCLL1-208ENST00000508459 ZNF213O14771 459 aa17.16■□□□□ 0.34
HMGCLL1-208ENST00000508459 BTDP43251 543 aa17.16■□□□□ 0.34
HMGCLL1-208ENST00000508459 TRDNQ13061 729 aa17.16■□□□□ 0.34
HMGCLL1-208ENST00000508459 TNFAIP1Q13829 316 aa17.16■□□□□ 0.34
HMGCLL1-208ENST00000508459 TSGA10IPQ3SY00 556 aa17.16■□□□□ 0.34
HMGCLL1-208ENST00000508459 SLC51AQ86UW1 340 aa17.16■□□□□ 0.34
HMGCLL1-208ENST00000508459 CERS5Q8N5B7 392 aa17.16■□□□□ 0.34
HMGCLL1-208ENST00000508459 CNNM2Q9H8M5 875 aa17.16■□□□□ 0.34
HMGCLL1-208ENST00000508459 AATFQ9NY61 560 aaKnown RBP eCLIP17.16■□□□□ 0.34
HMGCLL1-208ENST00000508459 JAG2Q9Y219 1238 aa17.16■□□□□ 0.34
HMGCLL1-208ENST00000508459 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
HMGCLL1-208ENST00000508459 ANP32AP39687 249 aaKnown RBP17.15■□□□□ 0.34
HMGCLL1-208ENST00000508459 ZNF280AP59817 542 aaPredicted RBP17.15■□□□□ 0.34
HMGCLL1-208ENST00000508459 ZNF589Q86UQ0 364 aaPredicted RBP17.15■□□□□ 0.34
HMGCLL1-208ENST00000508459 TEX11Q8IYF3 940 aa17.15■□□□□ 0.34
HMGCLL1-208ENST00000508459 MIGA1Q8NAN2 632 aa17.15■□□□□ 0.34
HMGCLL1-208ENST00000508459 HOOK2Q96ED9 719 aa17.15■□□□□ 0.34
HMGCLL1-208ENST00000508459 IL17RAQ96F46 866 aa17.15■□□□□ 0.34
HMGCLL1-208ENST00000508459 DHX36Q9H2U1 1008 aaKnown RBP17.15■□□□□ 0.34
HMGCLL1-208ENST00000508459 RBM8AQ9Y5S9 174 aaKnown RBP17.15■□□□□ 0.34
HMGCLL1-208ENST00000508459 TIAM2Q8IVF5 1701 aa17.14■□□□□ 0.33
HMGCLL1-208ENST00000508459 IQCA1LA6NCM1 817 aa17.14■□□□□ 0.33
HMGCLL1-208ENST00000508459 F8W031 263 aaPredicted RBP17.14■□□□□ 0.33
HMGCLL1-208ENST00000508459 TNNI2P48788 182 aa17.14■□□□□ 0.33
HMGCLL1-208ENST00000508459 RABEP1Q15276 862 aa17.14■□□□□ 0.33
HMGCLL1-208ENST00000508459 C9orf131Q5VYM1 1079 aa17.14■□□□□ 0.33
HMGCLL1-208ENST00000508459 SEC62Q99442 399 aaKnown RBP17.14■□□□□ 0.33
HMGCLL1-208ENST00000508459 TM6SF1Q9BZW5 370 aa17.14■□□□□ 0.33
HMGCLL1-208ENST00000508459 ARMT1Q9H993 441 aa17.14■□□□□ 0.33
HMGCLL1-208ENST00000508459 ZNF646O15015 1829 aaPredicted RBP17.14■□□□□ 0.33
HMGCLL1-208ENST00000508459 ST18O60284 1047 aa17.13■□□□□ 0.33
HMGCLL1-208ENST00000508459 MCM2P49736 904 aa17.13■□□□□ 0.33
HMGCLL1-208ENST00000508459 NECTIN1Q15223 517 aa17.13■□□□□ 0.33
HMGCLL1-208ENST00000508459 DIXDC1Q155Q3 683 aa17.13■□□□□ 0.33
HMGCLL1-208ENST00000508459 SBK1Q52WX2 424 aa17.13■□□□□ 0.33
HMGCLL1-208ENST00000508459 TTC6Q86TZ1 520 aa17.13■□□□□ 0.33
HMGCLL1-208ENST00000508459 IFNL3Q8IZI9 196 aa17.13■□□□□ 0.33
HMGCLL1-208ENST00000508459 LCORLQ8N3X6 602 aa17.13■□□□□ 0.33
HMGCLL1-208ENST00000508459 KCNB2Q92953 911 aa17.13■□□□□ 0.33
HMGCLL1-208ENST00000508459 CHMP4CQ96CF2 233 aa17.13■□□□□ 0.33
HMGCLL1-208ENST00000508459 GJA3Q9Y6H8 435 aa17.13■□□□□ 0.33
HMGCLL1-208ENST00000508459 COL2A1P02458 1487 aaPredicted RBP17.12■□□□□ 0.33
HMGCLL1-208ENST00000508459 SPDYE2BA6NHP3 402 aa17.12■□□□□ 0.33
HMGCLL1-208ENST00000508459 ENTPD3O75355 529 aa17.12■□□□□ 0.33
HMGCLL1-208ENST00000508459 FGAP02671 866 aa17.12■□□□□ 0.33
HMGCLL1-208ENST00000508459 HLA-DOAP06340 250 aa17.12■□□□□ 0.33
HMGCLL1-208ENST00000508459 SPDYE6P0CI01 402 aa17.12■□□□□ 0.33
HMGCLL1-208ENST00000508459 PDE4BQ07343 736 aa17.12■□□□□ 0.33
HMGCLL1-208ENST00000508459 CFAP100Q494V2 611 aa17.12■□□□□ 0.33
HMGCLL1-208ENST00000508459 PPP4R3BQ5MIZ7 849 aa17.12■□□□□ 0.33
HMGCLL1-208ENST00000508459 IDI2Q9BXS1 227 aa17.12■□□□□ 0.33
HMGCLL1-208ENST00000508459 MYOZ2Q9NPC6 264 aa17.12■□□□□ 0.33
HMGCLL1-208ENST00000508459 USP40Q9NVE5 1235 aa17.12■□□□□ 0.33
HMGCLL1-208ENST00000508459 GSG1L2A8MUP6 293 aa17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 SEC24BO95487 1268 aa17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 GMPSP49915 693 aaPredicted RBP17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 SCNN1DP51172 638 aa17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 CREB3L3Q68CJ9 461 aa17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 CCDC129Q6ZRS4 1044 aa17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 RALYLQ86SE5 291 aaKnown RBP17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 ADGRA1Q86SQ6 560 aa17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 ZNF384Q8TF68 577 aa17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 MTA3Q9BTC8 594 aa17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 KRT23Q9C075 422 aa17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 KCNQ5Q9NR82 932 aa17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 CNOT7Q9UIV1 285 aaKnown RBP17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 ANAPC4Q9UJX5 808 aa17.11■□□□□ 0.33
HMGCLL1-208ENST00000508459 COL4A5P29400 1685 aa17.1■□□□□ 0.33
HMGCLL1-208ENST00000508459 PTH1RQ03431 593 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms