RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ANGEL2Q5VTE6 544 aaKnown RBP3.45□□□□□ -1.86
NEDD4-208ENST00000508342 TTLL7Q6ZT98 887 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 GPC2Q8N158 579 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 ZNF784Q8NCA9 323 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-208ENST00000508342 MYOZ2Q9NPC6 264 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 MYH13Q9UKX3 1938 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 TRIM75PA6NK02 468 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 ERVV-1B6SEH8 477 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 ST18O60284 1047 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 HSPA6P17066 643 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 PEX19P40855 299 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 TAF1CQ15572 869 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-208ENST00000508342 SP8Q8IXZ3 490 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 BICC1Q9H694 974 aaKnown RBP3.45□□□□□ -1.86
NEDD4-208ENST00000508342 RSBN1LQ6PCB5 846 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-208ENST00000508342 CKAP2LQ8IYA6 745 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 GGA3Q9NZ52 723 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 SLC4A4Q9Y6R1 1079 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 TIAM2Q8IVF5 1701 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 GRM8O00222 908 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 ITPK1Q13572 414 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 ATP2B3Q16720 1220 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 SUSD4Q5VX71 490 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 FASTKD5Q7L8L6 764 aaKnown RBP3.45□□□□□ -1.86
NEDD4-208ENST00000508342 KIFC2Q96AC6 838 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 PARK7Q99497 189 aaKnown RBP3.45□□□□□ -1.86
NEDD4-208ENST00000508342 HTATIP2Q9BUP3 242 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 KAT14Q9H8E8 782 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 ADCY9O60503 1353 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 WDR33Q9C0J8 1336 aaKnown RBP3.45□□□□□ -1.86
NEDD4-208ENST00000508342 CCDC173Q0VFZ6 552 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 CYP4F22Q6NT55 531 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 REM2Q8IYK8 340 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-208ENST00000508342 RETREG2Q8NC44 543 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 VAT1LQ9HCJ6 419 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 AATFQ9NY61 560 aaKnown RBP eCLIP3.45□□□□□ -1.86
NEDD4-208ENST00000508342 PEAK1Q9H792 1746 aa3.45□□□□□ -1.86
NEDD4-208ENST00000508342 USP42Q9H9J4 1324 aaKnown RBP3.45□□□□□ -1.86
NEDD4-208ENST00000508342 BECN2A8MW95 431 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 SEMA3EO15041 775 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 TLR3O15455 904 aaKnown RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 SASH1O94885 1247 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 HSPA1AP0DMV8 641 aaKnown RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 HSPA1BP0DMV9 641 aaKnown RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 CETPP11597 493 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 RPS12P25398 132 aaKnown RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 MMP14P50281 582 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 SOX10P56693 466 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 CHRNDQ07001 517 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 MAP1SQ66K74 1059 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 GBP4Q96PP9 640 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 COA1Q9GZY4 146 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 NAPBQ9H115 298 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 GOLGA6L19H0YKK7 550 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 ZBTB24O43167 697 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 MSNP26038 577 aaKnown RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 BCAMP50895 628 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 USP14P54578 494 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 NAP1L1P55209 391 aaKnown RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 CLEC4GQ6UXB4 293 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 DDX11Q96FC9 970 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 ZNF496Q96IT1 587 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 WRNIP1Q96S55 665 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 HOMER2Q9NSB8 354 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 ATP6V1DQ9Y5K8 247 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 TSPY2A6NKD2 308 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 ZBBXA8MT70 800 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 TBC1D8O95759 1140 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 ALDH1A1P00352 501 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 GYS1P13807 737 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 YBX3P16989 372 aaKnown RBP eCLIP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 TGFBRAP1Q8WUH2 860 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 METTL14Q9HCE5 456 aaKnown RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 SLIT2O94813 1529 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 TRPA1O75762 1119 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 TAF3Q5VWG9 929 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 ZNF594Q96JF6 807 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 ZHX3Q9H4I2 956 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 LRFN2Q9ULH4 789 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 NUB1Q9Y5A7 615 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 NR2E3Q9Y5X4 410 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 MEGF6O75095 1541 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 SBF2Q86WG5 1849 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 TRAK2O60296 914 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 TXLNAP40222 546 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 NCBP1Q09161 790 aaKnown RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 CWF19L2Q2TBE0 894 aaKnown RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 PRR5LQ6MZQ0 368 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 DHX37Q8IY37 1157 aaKnown RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 MMP19Q99542 508 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 SAMM50Q9Y512 469 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 MYPNQ86TC9 1320 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 NPC1L1Q9UHC9 1359 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 SBNO2Q9Y2G9 1366 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 SLIT3O75094 1523 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 CCL15-CCL14A0A0B4J2E2 113 aa3.44□□□□□ -1.86
NEDD4-208ENST00000508342 MANSC4A6NHS7 340 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 NOP56O00567 594 aaKnown RBP3.44□□□□□ -1.86
NEDD4-208ENST00000508342 KCNQ3O43525 872 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms