RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 MAP4P27816 1152 aaKnown RBP9.05□□□□□ -0.96
DHFR-204ENST00000508282 CLEC10AQ8IUN9 316 aa9.05□□□□□ -0.96
DHFR-204ENST00000508282 CEP44Q9C0F1 390 aa9.05□□□□□ -0.96
DHFR-204ENST00000508282 DAB2P98082 770 aa9.04□□□□□ -0.96
DHFR-204ENST00000508282 CDPF1Q6NVV7 123 aa9.04□□□□□ -0.96
DHFR-204ENST00000508282 KRT82Q9NSB4 513 aa9.04□□□□□ -0.96
DHFR-204ENST00000508282 PPP1R9AQ9ULJ8 1098 aa9.04□□□□□ -0.96
DHFR-204ENST00000508282 ACTL7BQ9Y614 415 aa9.04□□□□□ -0.96
DHFR-204ENST00000508282 SYNGAP1Q96PV0 1343 aa9.04□□□□□ -0.96
DHFR-204ENST00000508282 CELA3AP09093 270 aa9.03□□□□□ -0.96
DHFR-204ENST00000508282 USP11P51784 963 aa9.03□□□□□ -0.96
DHFR-204ENST00000508282 ZNF252P-AS1Q0IIN9 211 aa9.03□□□□□ -0.96
DHFR-204ENST00000508282 ZMYM1Q5SVZ6 1142 aa9.03□□□□□ -0.96
DHFR-204ENST00000508282 KCNB2Q92953 911 aa9.03□□□□□ -0.96
DHFR-204ENST00000508282 FAM161BQ96MY7 647 aa9.03□□□□□ -0.96
DHFR-204ENST00000508282 AP4E1Q9UPM8 1137 aa9.03□□□□□ -0.96
DHFR-204ENST00000508282 IGLV1-40P01703 118 aa9.02□□□□□ -0.97
DHFR-204ENST00000508282 BMP6P22004 513 aa9.02□□□□□ -0.97
DHFR-204ENST00000508282 NFIAQ12857 509 aa9.02□□□□□ -0.97
DHFR-204ENST00000508282 KIF4BQ2VIQ3 1234 aa9.02□□□□□ -0.97
DHFR-204ENST00000508282 RASIP1Q5U651 963 aa9.02□□□□□ -0.97
DHFR-204ENST00000508282 RNF43Q68DV7 783 aa9.02□□□□□ -0.97
DHFR-204ENST00000508282 DYMQ7RTS9 669 aa9.02□□□□□ -0.97
DHFR-204ENST00000508282 GRIN3AQ8TCU5 1115 aa9.02□□□□□ -0.97
DHFR-204ENST00000508282 FBLIM1Q8WUP2 373 aa9.02□□□□□ -0.97
DHFR-204ENST00000508282 GSX1Q9H4S2 264 aaPredicted RBP9.02□□□□□ -0.97
DHFR-204ENST00000508282 FAM105AQ9NUU6 356 aa9.02□□□□□ -0.97
DHFR-204ENST00000508282 TTF2Q9UNY4 1162 aaKnown RBP9.02□□□□□ -0.97
DHFR-204ENST00000508282 RXRBP28702 533 aa9.01□□□□□ -0.97
DHFR-204ENST00000508282 PSMD2Q13200 908 aa9.01□□□□□ -0.97
DHFR-204ENST00000508282 MAP1SQ66K74 1059 aaPredicted RBP9.01□□□□□ -0.97
DHFR-204ENST00000508282 MPRIPQ6WCQ1 1025 aa9.01□□□□□ -0.97
DHFR-204ENST00000508282 TMC4Q7Z404 712 aa9.01□□□□□ -0.97
DHFR-204ENST00000508282 SLC51AQ86UW1 340 aa9.01□□□□□ -0.97
DHFR-204ENST00000508282 EZH1Q92800 747 aaPredicted RBP9.01□□□□□ -0.97
DHFR-204ENST00000508282 EMILIN2Q9BXX0 1053 aa9.01□□□□□ -0.97
DHFR-204ENST00000508282 PCDHGC5Q9Y5F6 944 aa9.01□□□□□ -0.97
DHFR-204ENST00000508282 TMPRSS2O15393 492 aa9□□□□□ -0.97
DHFR-204ENST00000508282 GSC2O15499 205 aa9□□□□□ -0.97
DHFR-204ENST00000508282 TMCO4Q5TGY1 634 aa9□□□□□ -0.97
DHFR-204ENST00000508282 CBX8Q9HC52 389 aa9□□□□□ -0.97
DHFR-204ENST00000508282 CACNA2D2Q9NY47 1150 aa9□□□□□ -0.97
DHFR-204ENST00000508282 CRIM1Q9NZV1 1036 aa9□□□□□ -0.97
DHFR-204ENST00000508282 FAM95CA0A1B0GW59 222 aa8.99□□□□□ -0.97
DHFR-204ENST00000508282 SLFN14P0C7P3 912 aa8.99□□□□□ -0.97
DHFR-204ENST00000508282 ASPAP45381 313 aa8.99□□□□□ -0.97
DHFR-204ENST00000508282 XPCQ01831 940 aaPredicted RBP8.99□□□□□ -0.97
DHFR-204ENST00000508282 DBNDD2Q9BQY9 259 aa8.99□□□□□ -0.97
DHFR-204ENST00000508282 ACSS3Q9H6R3 686 aa8.99□□□□□ -0.97
DHFR-204ENST00000508282 SAMM50Q9Y512 469 aa8.99□□□□□ -0.97
DHFR-204ENST00000508282 LOC100996750A0A140TA64 210 aa8.98□□□□□ -0.97
DHFR-204ENST00000508282 NFICP08651 508 aa8.98□□□□□ -0.97
DHFR-204ENST00000508282 RAB6AP20340 208 aa8.98□□□□□ -0.97
DHFR-204ENST00000508282 ID3Q02535 119 aa8.98□□□□□ -0.97
DHFR-204ENST00000508282 MEI1Q5TIA1 1274 aa8.98□□□□□ -0.97
DHFR-204ENST00000508282 PCNX4Q63HM2 1172 aa8.98□□□□□ -0.97
DHFR-204ENST00000508282 SV2BQ7L1I2 683 aa8.98□□□□□ -0.97
DHFR-204ENST00000508282 GPBAR1Q8TDU6 330 aa8.98□□□□□ -0.97
DHFR-204ENST00000508282 KRTAP4-6Q9BYQ5 205 aa8.98□□□□□ -0.97
DHFR-204ENST00000508282 RNF112Q9ULX5 631 aa8.98□□□□□ -0.97
DHFR-204ENST00000508282 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.97□□□□□ -0.97
DHFR-204ENST00000508282 CTSHP09668 335 aa8.97□□□□□ -0.97
DHFR-204ENST00000508282 NFKBIBQ15653 356 aa8.97□□□□□ -0.97
DHFR-204ENST00000508282 ZDHHC13Q8IUH4 622 aa8.97□□□□□ -0.97
DHFR-204ENST00000508282 FANCD2OSQ96PS1 177 aa8.97□□□□□ -0.97
DHFR-204ENST00000508282 YIPF2Q9BWQ6 316 aa8.97□□□□□ -0.97
DHFR-204ENST00000508282 SEMA6CQ9H3T2 930 aa8.97□□□□□ -0.97
DHFR-204ENST00000508282 DISC1Q9NRI5 854 aa8.97□□□□□ -0.97
DHFR-204ENST00000508282 HNRNPUQ00839 825 aaKnown RBP eCLIP8.96□□□□□ -0.986e-6■■■■□ 19.8
DHFR-204ENST00000508282 CCDC85BQ15834 202 aaPredicted RBP8.96□□□□□ -0.98
DHFR-204ENST00000508282 ZC3H12AQ5D1E8 599 aaKnown RBP8.96□□□□□ -0.98
DHFR-204ENST00000508282 LLGL2Q6P1M3 1020 aa8.96□□□□□ -0.98
DHFR-204ENST00000508282 PAOXQ6QHF9 649 aa8.96□□□□□ -0.98
DHFR-204ENST00000508282 MFSD14AQ96MC6 490 aa8.96□□□□□ -0.98
DHFR-204ENST00000508282 BCL2L13Q9BXK5 485 aa8.96□□□□□ -0.98
DHFR-204ENST00000508282 TRIM37O94972 964 aa8.95□□□□□ -0.98
DHFR-204ENST00000508282 LRRC14Q15048 493 aa8.95□□□□□ -0.98
DHFR-204ENST00000508282 SHISA5Q8N114 240 aa8.95□□□□□ -0.98
DHFR-204ENST00000508282 SHKBP1Q8TBC3 707 aa8.95□□□□□ -0.98
DHFR-204ENST00000508282 ACSBG1Q96GR2 724 aa8.95□□□□□ -0.98
DHFR-204ENST00000508282 ATXN3LQ9H3M9 355 aa8.95□□□□□ -0.98
DHFR-204ENST00000508282 PRKAG2Q9UGJ0 569 aa8.95□□□□□ -0.98
DHFR-204ENST00000508282 CYP8B1Q9UNU6 501 aa8.95□□□□□ -0.98
DHFR-204ENST00000508282 SORBS3O60504 671 aa8.94□□□□□ -0.98
DHFR-204ENST00000508282 TGFB1P01137 390 aa8.94□□□□□ -0.98
DHFR-204ENST00000508282 ADMP35318 185 aa8.94□□□□□ -0.98
DHFR-204ENST00000508282 TTBK2Q6IQ55 1244 aa8.94□□□□□ -0.98
DHFR-204ENST00000508282 Q8N3U1 123 aa8.94□□□□□ -0.98
DHFR-204ENST00000508282 PRR19A6NJB7 356 aa8.93□□□□□ -0.98
DHFR-204ENST00000508282 DYNC1LI2O43237 492 aaPredicted RBP8.93□□□□□ -0.98
DHFR-204ENST00000508282 MFAP1P55081 439 aaKnown RBP8.93□□□□□ -0.98
DHFR-204ENST00000508282 TRIM26Q12899 539 aaPredicted RBP8.93□□□□□ -0.98
DHFR-204ENST00000508282 MAP7Q14244 749 aa8.93□□□□□ -0.98
DHFR-204ENST00000508282 TAF1CQ15572 869 aaPredicted RBP8.93□□□□□ -0.98
DHFR-204ENST00000508282 SEZ6L2Q6UXD5 910 aa8.93□□□□□ -0.98
DHFR-204ENST00000508282 FBXL6Q8N531 539 aa8.93□□□□□ -0.98
DHFR-204ENST00000508282 GIPC2Q8TF65 315 aa8.93□□□□□ -0.98
DHFR-204ENST00000508282 GATA6Q92908 595 aa8.93□□□□□ -0.98
DHFR-204ENST00000508282 DAGLAQ9Y4D2 1042 aa8.93□□□□□ -0.98
DHFR-204ENST00000508282 USP31Q70CQ4 1352 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms