RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SNW1Q13573 536 aaKnown RBP16.93■□□□□ 0.3
DDX41-208ENST00000507955 TBC1D9BQ66K14 1250 aa16.93■□□□□ 0.3
DDX41-208ENST00000507955 CMTR1Q8N1G2 835 aaKnown RBP16.93■□□□□ 0.3
DDX41-208ENST00000507955 FBXO18Q8NFZ0 1043 aa16.93■□□□□ 0.3
DDX41-208ENST00000507955 PCDHA7Q9UN72 937 aa16.93■□□□□ 0.3
DDX41-208ENST00000507955 KLRK1P26718 216 aa16.92■□□□□ 0.3
DDX41-208ENST00000507955 METAP2P50579 478 aaKnown RBP eCLIP16.92■□□□□ 0.33e-6■■■■□ 22.7
DDX41-208ENST00000507955 NFXL1Q6ZNB6 911 aa16.92■□□□□ 0.3
DDX41-208ENST00000507955 FAM200AQ8TCP9 573 aa16.92■□□□□ 0.3
DDX41-208ENST00000507955 IGDCC4Q8TDY8 1250 aa16.92■□□□□ 0.3
DDX41-208ENST00000507955 CELF1Q92879 486 aaKnown RBP16.92■□□□□ 0.3
DDX41-208ENST00000507955 SLC4A4Q9Y6R1 1079 aa16.92■□□□□ 0.3
DDX41-208ENST00000507955 DDX60Q8IY21 1712 aaKnown RBP16.92■□□□□ 0.3
DDX41-208ENST00000507955 GTF2E1P29083 439 aaPredicted RBP16.92■□□□□ 0.3
DDX41-208ENST00000507955 NOLC1Q14978 699 aaKnown RBP eCLIP16.92■□□□□ 0.3
DDX41-208ENST00000507955 APOA5Q6Q788 366 aa16.92■□□□□ 0.3
DDX41-208ENST00000507955 AK7Q96M32 723 aa16.92■□□□□ 0.3
DDX41-208ENST00000507955 FSIP1Q8NA03 581 aa16.91■□□□□ 0.3
DDX41-208ENST00000507955 KCNF1Q9H3M0 494 aa16.91■□□□□ 0.3
DDX41-208ENST00000507955 ATRNO75882 1429 aa16.91■□□□□ 0.3
DDX41-208ENST00000507955 DYNC1I1O14576 645 aa16.91■□□□□ 0.3
DDX41-208ENST00000507955 TDO2P48775 406 aa16.91■□□□□ 0.3
DDX41-208ENST00000507955 TMEM67Q5HYA8 995 aa16.91■□□□□ 0.3
DDX41-208ENST00000507955 BARGINQ6ZT62 677 aa16.91■□□□□ 0.3
DDX41-208ENST00000507955 LY9Q9HBG7 655 aa16.91■□□□□ 0.3
DDX41-208ENST00000507955 JAG2Q9Y219 1238 aa16.91■□□□□ 0.3
DDX41-208ENST00000507955 TSC1Q92574 1164 aa16.9■□□□□ 0.3
DDX41-208ENST00000507955 ZNF396Q96N95 335 aaPredicted RBP16.9■□□□□ 0.3
DDX41-208ENST00000507955 BCL2L12Q9HB09 334 aa16.9■□□□□ 0.3
DDX41-208ENST00000507955 LRP5O75197 1615 aa16.9■□□□□ 0.3
DDX41-208ENST00000507955 LTBP4Q8N2S1 1624 aa16.9■□□□□ 0.3
DDX41-208ENST00000507955 DHX16O60231 1041 aaKnown RBP16.9■□□□□ 0.3
DDX41-208ENST00000507955 RBM43Q6ZSC3 357 aaKnown RBP16.9■□□□□ 0.3
DDX41-208ENST00000507955 C11orf57Q6ZUT1 292 aaPredicted RBP16.9■□□□□ 0.3
DDX41-208ENST00000507955 FAM217BQ9NTX9 383 aaPredicted RBP16.9■□□□□ 0.3
DDX41-208ENST00000507955 CYP2D7A0A087X1C5 515 aa16.89■□□□□ 0.29
DDX41-208ENST00000507955 IFIT3O14879 490 aaKnown RBP16.89■□□□□ 0.29
DDX41-208ENST00000507955 RANBP6O60518 1105 aaKnown RBP16.89■□□□□ 0.29
DDX41-208ENST00000507955 CYP7A1P22680 504 aa16.89■□□□□ 0.29
DDX41-208ENST00000507955 ZNF165P49910 485 aa16.89■□□□□ 0.29
DDX41-208ENST00000507955 EVX2Q03828 476 aa16.89■□□□□ 0.29
DDX41-208ENST00000507955 ALG1Q9BT22 464 aa16.89■□□□□ 0.29
DDX41-208ENST00000507955 RAI14Q9P0K7 980 aa16.89■□□□□ 0.29
DDX41-208ENST00000507955 MINDY4BA8MYZ0 360 aa16.89■□□□□ 0.29
DDX41-208ENST00000507955 MARCKSP29966 332 aaPredicted RBP16.89■□□□□ 0.29
DDX41-208ENST00000507955 DNTTIP2Q5QJE6 756 aaKnown RBP16.89■□□□□ 0.29
DDX41-208ENST00000507955 PYCARDQ9ULZ3 195 aa16.89■□□□□ 0.29
DDX41-208ENST00000507955 NDUFA8P51970 172 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 DYNLL1P63167 89 aaKnown RBP16.88■□□□□ 0.29
DDX41-208ENST00000507955 MYSM1Q5VVJ2 828 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 ANKRD18AQ8IVF6 992 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 LINC00301Q8NCQ3 95 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 ENGASEQ8NFI3 743 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 ZNF652Q9Y2D9 606 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 ZMYM6O95789 1325 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 ZBTB43O43298 467 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 GUCY1A2P33402 732 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 KIF23Q02241 960 aaPredicted RBP16.88■□□□□ 0.29
DDX41-208ENST00000507955 STK38Q15208 465 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 SF3A1Q15459 793 aaKnown RBP16.88■□□□□ 0.29
DDX41-208ENST00000507955 SMARCC1Q92922 1105 aaPredicted RBP16.88■□□□□ 0.29
DDX41-208ENST00000507955 SPTLC3Q9NUV7 552 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 NRBP1Q9UHY1 535 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 MINPP1Q9UNW1 487 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 MYH15Q9Y2K3 1946 aa16.88■□□□□ 0.29
DDX41-208ENST00000507955 AKNAD1Q5T1N1 836 aa16.87■□□□□ 0.29
DDX41-208ENST00000507955 CCDC73Q6ZRK6 1079 aa16.87■□□□□ 0.29
DDX41-208ENST00000507955 MFSD6Q6ZSS7 791 aa16.87■□□□□ 0.29
DDX41-208ENST00000507955 MYRIPQ8NFW9 859 aa16.87■□□□□ 0.29
DDX41-208ENST00000507955 TFCP2L1Q9NZI6 479 aa16.87■□□□□ 0.29
DDX41-208ENST00000507955 GOLGA8AA7E2F4 631 aa16.87■□□□□ 0.29
DDX41-208ENST00000507955 NTRK3Q16288 839 aa16.87■□□□□ 0.29
DDX41-208ENST00000507955 CDC5LQ99459 802 aaKnown RBP16.87■□□□□ 0.29
DDX41-208ENST00000507955 ARID3AQ99856 593 aa16.87■□□□□ 0.29
DDX41-208ENST00000507955 RTEL1Q9NZ71 1219 aa16.87■□□□□ 0.29
DDX41-208ENST00000507955 COL1A1P02452 1464 aaPredicted RBP16.87■□□□□ 0.29
DDX41-208ENST00000507955 KRT40Q6A162 431 aa16.86■□□□□ 0.29
DDX41-208ENST00000507955 VPS37DQ86XT2 251 aa16.86■□□□□ 0.29
DDX41-208ENST00000507955 ZNF384Q8TF68 577 aa16.86■□□□□ 0.29
DDX41-208ENST00000507955 SLC26A6Q9BXS9 759 aa16.86■□□□□ 0.29
DDX41-208ENST00000507955 ZMYND15Q9H091 742 aa16.86■□□□□ 0.29
DDX41-208ENST00000507955 GNPATO15228 680 aa16.86■□□□□ 0.29
DDX41-208ENST00000507955 KINO60870 393 aaKnown RBP16.86■□□□□ 0.29
DDX41-208ENST00000507955 PRDM1O75626 825 aa16.86■□□□□ 0.29
DDX41-208ENST00000507955 FAM160A1Q05DH4 1040 aa16.86■□□□□ 0.29
DDX41-208ENST00000507955 SLC4A8Q2Y0W8 1093 aa16.86■□□□□ 0.29
DDX41-208ENST00000507955 SLC12A7Q9Y666 1083 aa16.86■□□□□ 0.29
DDX41-208ENST00000507955 ALX1Q15699 326 aa16.85■□□□□ 0.29
DDX41-208ENST00000507955 FAM84BQ96KN1 310 aaPredicted RBP16.85■□□□□ 0.29
DDX41-208ENST00000507955 SPTLC2O15270 562 aa16.85■□□□□ 0.29
DDX41-208ENST00000507955 WDHD1O75717 1129 aaPredicted RBP16.85■□□□□ 0.29
DDX41-208ENST00000507955 SYNE3Q6ZMZ3 975 aa16.85■□□□□ 0.29
DDX41-208ENST00000507955 TRIM5Q9C035 493 aa16.85■□□□□ 0.29
DDX41-208ENST00000507955 BCL9LQ86UU0 1499 aa16.85■□□□□ 0.29
DDX41-208ENST00000507955 C4AP0C0L4 1744 aa16.85■□□□□ 0.29
DDX41-208ENST00000507955 C4BP0C0L5 1744 aa16.85■□□□□ 0.29
DDX41-208ENST00000507955 CCDC69A6NI79 296 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 PTGS1P23219 599 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 IARSP41252 1262 aaKnown RBP16.84■□□□□ 0.29
DDX41-208ENST00000507955 ISM2Q6H9L7 571 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms