RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 LDHBP07195 334 aaKnown RBP19.56■□□□□ 0.72
DDX41-207ENST00000507900 DYNLL1P63167 89 aaKnown RBP19.56■□□□□ 0.72
DDX41-207ENST00000507900 APOBRQ0VD83 1088 aa19.56■□□□□ 0.72
DDX41-207ENST00000507900 AKNAD1Q5T1N1 836 aa19.56■□□□□ 0.72
DDX41-207ENST00000507900 C2CD5Q86YS7 1000 aa19.56■□□□□ 0.72
DDX41-207ENST00000507900 SLX4Q8IY92 1834 aa19.56■□□□□ 0.72
DDX41-207ENST00000507900 FAM205AQ6ZU69 1335 aa19.55■□□□□ 0.72
DDX41-207ENST00000507900 H0YIN7 160 aa19.55■□□□□ 0.72
DDX41-207ENST00000507900 C6orf229H3BNL8 230 aa19.55■□□□□ 0.72
DDX41-207ENST00000507900 GSTO1P78417 241 aa19.55■□□□□ 0.72
DDX41-207ENST00000507900 SCRN1Q12765 414 aa19.55■□□□□ 0.72
DDX41-207ENST00000507900 CHST3Q7LGC8 479 aa19.55■□□□□ 0.72
DDX41-207ENST00000507900 DEFB132Q7Z7B7 95 aa19.55■□□□□ 0.72
DDX41-207ENST00000507900 MPNDQ8N594 471 aa19.55■□□□□ 0.72
DDX41-207ENST00000507900 SDR42E1Q8WUS8 393 aa19.55■□□□□ 0.72
DDX41-207ENST00000507900 COA1Q9GZY4 146 aa19.55■□□□□ 0.72
DDX41-207ENST00000507900 C10orf71Q711Q0 1435 aa19.55■□□□□ 0.72
DDX41-207ENST00000507900 ZSCAN22P10073 491 aaPredicted RBP19.54■□□□□ 0.72
DDX41-207ENST00000507900 PDCP20941 246 aa19.54■□□□□ 0.72
DDX41-207ENST00000507900 PDIA3P30101 505 aaKnown RBP19.54■□□□□ 0.72
DDX41-207ENST00000507900 STK3Q13188 491 aa19.54■□□□□ 0.72
DDX41-207ENST00000507900 SMARCC2Q8TAQ2 1214 aa19.54■□□□□ 0.72
DDX41-207ENST00000507900 TBC1D22AQ8WUA7 517 aa19.54■□□□□ 0.72
DDX41-207ENST00000507900 TMEM87BQ96K49 555 aa19.54■□□□□ 0.72
DDX41-207ENST00000507900 CRNKL1Q9BZJ0 848 aaKnown RBP19.54■□□□□ 0.72
DDX41-207ENST00000507900 KRT23Q9C075 422 aa19.54■□□□□ 0.72
DDX41-207ENST00000507900 RNF41Q9H4P4 317 aaPredicted RBP19.54■□□□□ 0.72
DDX41-207ENST00000507900 KIF13BQ9NQT8 1826 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 CTDSPL2Q05D32 466 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 PPARAQ07869 468 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 CYB5R4Q7L1T6 521 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 MTA3Q9BTC8 594 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 ATP8A2Q9NTI2 1148 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 ANGEL1Q9UNK9 670 aaKnown RBP19.53■□□□□ 0.72
DDX41-207ENST00000507900 JAG2Q9Y219 1238 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 CDK5RAP2Q96SN8 1893 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 B4E1Z4 1266 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 SH2B2O14492 632 aaPredicted RBP19.53■□□□□ 0.72
DDX41-207ENST00000507900 PCP11498 1178 aaKnown RBP19.53■□□□□ 0.72
DDX41-207ENST00000507900 DPP8Q6V1X1 898 aaPredicted RBP19.53■□□□□ 0.72
DDX41-207ENST00000507900 MFSD6Q6ZSS7 791 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 CCDC125Q86Z20 511 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 CERS3Q8IU89 383 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 SLC16A10Q8TF71 515 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 TMX4Q9H1E5 349 aaPredicted RBP19.53■□□□□ 0.72
DDX41-207ENST00000507900 AATFQ9NY61 560 aaKnown RBP eCLIP19.53■□□□□ 0.72
DDX41-207ENST00000507900 MTMR6Q9Y217 621 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 TACC3Q9Y6A5 838 aa19.53■□□□□ 0.72
DDX41-207ENST00000507900 NAV1Q8NEY1 1877 aa19.52■□□□□ 0.72
DDX41-207ENST00000507900 TRAK2O60296 914 aa19.52■□□□□ 0.71
DDX41-207ENST00000507900 LDHCP07864 332 aa19.52■□□□□ 0.71
DDX41-207ENST00000507900 PPP4CP60510 307 aa19.52■□□□□ 0.71
DDX41-207ENST00000507900 SKOR2Q2VWA4 1001 aaPredicted RBP19.52■□□□□ 0.71
DDX41-207ENST00000507900 NKX2-3Q8TAU0 364 aa19.52■□□□□ 0.71
DDX41-207ENST00000507900 CNKSR1Q969H4 720 aa19.52■□□□□ 0.71
DDX41-207ENST00000507900 GPHNQ9NQX3 736 aaPredicted RBP19.52■□□□□ 0.71
DDX41-207ENST00000507900 SNED1Q8TER0 1413 aa19.51■□□□□ 0.71
DDX41-207ENST00000507900 FGRP09769 529 aa19.51■□□□□ 0.71
DDX41-207ENST00000507900 GRIK5Q16478 980 aa19.51■□□□□ 0.71
DDX41-207ENST00000507900 NSUN7Q8NE18 718 aaKnown RBP19.51■□□□□ 0.71
DDX41-207ENST00000507900 ZNF622Q969S3 477 aaKnown RBP eCLIP19.51■□□□□ 0.714e-9■□□□□ 11.2
DDX41-207ENST00000507900 BRPF3Q9ULD4 1205 aa19.51■□□□□ 0.71
DDX41-207ENST00000507900 SUGT1Q9Y2Z0 365 aa19.51■□□□□ 0.71
DDX41-207ENST00000507900 ZNF646O15015 1829 aaPredicted RBP19.51■□□□□ 0.71
DDX41-207ENST00000507900 DDX60LQ5H9U9 1706 aaKnown RBP19.51■□□□□ 0.71
DDX41-207ENST00000507900 MROH7-TTC4A0A0A0MT08 1334 aa19.51■□□□□ 0.71
DDX41-207ENST00000507900 F13A1P00488 732 aa19.5■□□□□ 0.71
DDX41-207ENST00000507900 HMGN5P82970 282 aaKnown RBP19.5■□□□□ 0.71
DDX41-207ENST00000507900 MCTP1Q6DN14 999 aa19.5■□□□□ 0.71
DDX41-207ENST00000507900 SGMS1Q86VZ5 419 aa19.5■□□□□ 0.71
DDX41-207ENST00000507900 IGDCC4Q8TDY8 1250 aa19.5■□□□□ 0.71
DDX41-207ENST00000507900 EYA3Q99504 573 aa19.5■□□□□ 0.71
DDX41-207ENST00000507900 ZC3H12CQ9C0D7 883 aaKnown RBP19.5■□□□□ 0.71
DDX41-207ENST00000507900 DCP1AQ9NPI6 582 aaPredicted RBP19.5■□□□□ 0.71
DDX41-207ENST00000507900 FOCADQ5VW36 1801 aa19.5■□□□□ 0.71
DDX41-207ENST00000507900 KLF18A0A0U1RQI7 1052 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 JAK2O60674 1132 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 CTDNEP1O95476 244 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 LIFRP42702 1097 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 SBK1Q52WX2 424 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 LARP1BQ659C4 914 aaKnown RBP19.49■□□□□ 0.71
DDX41-207ENST00000507900 CTR9Q6PD62 1173 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 OLFM4Q6UX06 510 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 FAM163AQ96GL9 167 aaPredicted RBP19.49■□□□□ 0.71
DDX41-207ENST00000507900 ZSWIM5Q9P217 1185 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 ARPP21Q9UBL0 812 aaPredicted RBP19.49■□□□□ 0.71
DDX41-207ENST00000507900 HPS5Q9UPZ3 1129 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 KDM4AO75164 1064 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 BAG3O95817 575 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 MFSD14BQ5SR56 506 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 FOXD4L5Q5VV16 416 aaPredicted RBP19.49■□□□□ 0.71
DDX41-207ENST00000507900 FOXD4L4Q8WXT5 416 aaPredicted RBP19.49■□□□□ 0.71
DDX41-207ENST00000507900 RTFDC1Q9BY42 306 aaPredicted RBP19.49■□□□□ 0.71
DDX41-207ENST00000507900 LMBRD1Q9NUN5 540 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 MKRN1Q9UHC7 482 aaKnown RBP19.49■□□□□ 0.71
DDX41-207ENST00000507900 ATP6V1DQ9Y5K8 247 aa19.49■□□□□ 0.71
DDX41-207ENST00000507900 GAKO14976 1311 aa19.48■□□□□ 0.71
DDX41-207ENST00000507900 TCHHQ07283 1943 aa19.48■□□□□ 0.71
DDX41-207ENST00000507900 NID2Q14112 1375 aa19.48■□□□□ 0.71
DDX41-207ENST00000507900 CC2D2BQ6DHV5 1058 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms