RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 ADGRA1Q86SQ6 560 aa22.14■■□□□ 1.13
NPHP4-210ENST00000506941 SLF2Q8IX21 1173 aa22.14■■□□□ 1.13
NPHP4-210ENST00000506941 RFX7Q2KHR2 1363 aa22.13■■□□□ 1.13
NPHP4-210ENST00000506941 IDH1O75874 414 aaKnown RBP22.13■■□□□ 1.13
NPHP4-210ENST00000506941 CENPBP07199 599 aaPredicted RBP22.13■■□□□ 1.13
NPHP4-210ENST00000506941 BTDP43251 543 aa22.13■■□□□ 1.13
NPHP4-210ENST00000506941 GSTO1P78417 241 aa22.13■■□□□ 1.13
NPHP4-210ENST00000506941 RASA3Q14644 834 aa22.13■■□□□ 1.13
NPHP4-210ENST00000506941 NAA16Q6N069 864 aaPredicted RBP22.13■■□□□ 1.13
NPHP4-210ENST00000506941 MYH1P12882 1939 aa22.12■■□□□ 1.13
NPHP4-210ENST00000506941 GPR75-ASB3A0A0A6YYF3 556 aa22.12■■□□□ 1.13
NPHP4-210ENST00000506941 CDAN1Q8IWY9 1227 aa22.12■■□□□ 1.13
NPHP4-210ENST00000506941 GPATCH3Q96I76 525 aa22.12■■□□□ 1.13
NPHP4-210ENST00000506941 LNPKQ9C0E8 428 aa22.12■■□□□ 1.13
NPHP4-210ENST00000506941 PAG1Q9NWQ8 432 aa22.12■■□□□ 1.13
NPHP4-210ENST00000506941 PPP2R3BQ9Y5P8 575 aa22.12■■□□□ 1.13
NPHP4-210ENST00000506941 TTC41PQ6P2S7 1318 aa22.11■■□□□ 1.13
NPHP4-210ENST00000506941 LDHCP07864 332 aa22.11■■□□□ 1.13
NPHP4-210ENST00000506941 MX1P20591 662 aa22.11■■□□□ 1.13
NPHP4-210ENST00000506941 NUCB1Q02818 461 aa22.11■■□□□ 1.13
NPHP4-210ENST00000506941 TNFAIP1Q13829 316 aa22.11■■□□□ 1.13
NPHP4-210ENST00000506941 TTF1Q15361 905 aaPredicted RBP22.11■■□□□ 1.13
NPHP4-210ENST00000506941 FKBP1CQ5VVH2 108 aa22.11■■□□□ 1.13
NPHP4-210ENST00000506941 PI4K2BQ8TCG2 481 aa22.11■■□□□ 1.13
NPHP4-210ENST00000506941 TMEM39BQ9GZU3 492 aa22.11■■□□□ 1.13
NPHP4-210ENST00000506941 USP40Q9NVE5 1235 aa22.11■■□□□ 1.13
NPHP4-210ENST00000506941 TMOD2Q9NZR1 351 aa22.11■■□□□ 1.13
NPHP4-210ENST00000506941 ZBTB47Q9UFB7 747 aaPredicted RBP22.11■■□□□ 1.13
NPHP4-210ENST00000506941 RHBDL3P58872 404 aa22.1■■□□□ 1.13
NPHP4-210ENST00000506941 NFIAQ12857 509 aa22.1■■□□□ 1.13
NPHP4-210ENST00000506941 MAGEB6Q8N7X4 407 aa22.1■■□□□ 1.13
NPHP4-210ENST00000506941 TEPSINQ96N21 525 aa22.1■■□□□ 1.13
NPHP4-210ENST00000506941 GBA2Q9HCG7 927 aaPredicted RBP22.1■■□□□ 1.13
NPHP4-210ENST00000506941 TLL2Q9Y6L7 1015 aa22.1■■□□□ 1.13
NPHP4-210ENST00000506941 SIPA1L1O43166 1804 aa22.1■■□□□ 1.13
NPHP4-210ENST00000506941 IGSF3O75054 1194 aa22.09■■□□□ 1.13
NPHP4-210ENST00000506941 MAP3K12Q12852 859 aa22.09■■□□□ 1.13
NPHP4-210ENST00000506941 NBPF12Q5TAG4 269 aaPredicted RBP22.09■■□□□ 1.13
NPHP4-210ENST00000506941 CHD1LQ86WJ1 897 aa22.09■■□□□ 1.13
NPHP4-210ENST00000506941 DNAJC5GQ8N7S2 189 aa22.09■■□□□ 1.13
NPHP4-210ENST00000506941 FAM198AQ9UFP1 575 aa22.09■■□□□ 1.13
NPHP4-210ENST00000506941 ABT1Q9ULW3 272 aaKnown RBP22.09■■□□□ 1.13
NPHP4-210ENST00000506941 NAV1Q8NEY1 1877 aa22.09■■□□□ 1.13
NPHP4-210ENST00000506941 WDHD1O75717 1129 aaPredicted RBP22.08■■□□□ 1.13
NPHP4-210ENST00000506941 CYP7A1P22680 504 aa22.08■■□□□ 1.13
NPHP4-210ENST00000506941 TNNI2P48788 182 aa22.08■■□□□ 1.13
NPHP4-210ENST00000506941 SAPCD2Q86UD0 394 aa22.08■■□□□ 1.13
NPHP4-210ENST00000506941 FAM83AQ86UY5 434 aa22.08■■□□□ 1.13
NPHP4-210ENST00000506941 DDX60LQ5H9U9 1706 aaKnown RBP22.08■■□□□ 1.12
NPHP4-210ENST00000506941 THSD7BQ9C0I4 1608 aa22.07■■□□□ 1.12
NPHP4-210ENST00000506941 RASSF10A6NK89 507 aa22.07■■□□□ 1.12
NPHP4-210ENST00000506941 PDE6AP16499 860 aa22.07■■□□□ 1.12
NPHP4-210ENST00000506941 MOB2Q70IA6 237 aa22.07■■□□□ 1.12
NPHP4-210ENST00000506941 IDI2Q9BXS1 227 aa22.07■■□□□ 1.12
NPHP4-210ENST00000506941 DDX4Q9NQI0 724 aaKnown RBP22.07■■□□□ 1.12
NPHP4-210ENST00000506941 AATFQ9NY61 560 aaKnown RBP eCLIP22.07■■□□□ 1.12
NPHP4-210ENST00000506941 STAP2Q9UGK3 403 aa22.07■■□□□ 1.12
NPHP4-210ENST00000506941 FZD1Q9UP38 647 aa22.07■■□□□ 1.12
NPHP4-210ENST00000506941 RPAP1Q9BWH6 1393 aaPredicted RBP22.07■■□□□ 1.12
NPHP4-210ENST00000506941 BAZ2AQ9UIF9 1905 aaKnown RBP22.06■■□□□ 1.12
NPHP4-210ENST00000506941 TCRBV5S4A2TA0A5A2 114 aa22.06■■□□□ 1.12
NPHP4-210ENST00000506941 RGS3P49796 1198 aa22.06■■□□□ 1.12
NPHP4-210ENST00000506941 PDE1AP54750 535 aa22.06■■□□□ 1.12
NPHP4-210ENST00000506941 TCP10Q12799 353 aa22.06■■□□□ 1.12
NPHP4-210ENST00000506941 SLC9C2Q5TAH2 1124 aa22.06■■□□□ 1.12
NPHP4-210ENST00000506941 ZFPM1Q8IX07 1006 aa22.06■■□□□ 1.12
NPHP4-210ENST00000506941 C2orf69Q8N8R5 385 aa22.06■■□□□ 1.12
NPHP4-210ENST00000506941 SH3RF3Q8TEJ3 882 aaPredicted RBP22.06■■□□□ 1.12
NPHP4-210ENST00000506941 MKRN1Q9UHC7 482 aaKnown RBP22.06■■□□□ 1.12
NPHP4-210ENST00000506941 ERC2O15083 957 aa22.05■■□□□ 1.12
NPHP4-210ENST00000506941 GLRX3O76003 335 aaKnown RBP22.05■■□□□ 1.12
NPHP4-210ENST00000506941 MAP4K4O95819 1239 aaPredicted RBP22.05■■□□□ 1.12
NPHP4-210ENST00000506941 CHGBP05060 677 aa22.05■■□□□ 1.12
NPHP4-210ENST00000506941 NF2P35240 595 aa22.05■■□□□ 1.12
NPHP4-210ENST00000506941 PPP4CP60510 307 aa22.05■■□□□ 1.12
NPHP4-210ENST00000506941 DYNLL1P63167 89 aaKnown RBP22.05■■□□□ 1.12
NPHP4-210ENST00000506941 SLFNL1Q499Z3 407 aa22.05■■□□□ 1.12
NPHP4-210ENST00000506941 MIGA1Q8NAN2 632 aa22.05■■□□□ 1.12
NPHP4-210ENST00000506941 FAM151AQ8WW52 585 aa22.05■■□□□ 1.12
NPHP4-210ENST00000506941 ZNF532Q9HCE3 1301 aa22.05■■□□□ 1.12
NPHP4-210ENST00000506941 LAMB1P07942 1786 aa22.04■■□□□ 1.12
NPHP4-210ENST00000506941 HUNKP57058 714 aa22.04■■□□□ 1.12
NPHP4-210ENST00000506941 PRKG1Q13976 671 aa22.04■■□□□ 1.12
NPHP4-210ENST00000506941 NOL10Q9BSC4 688 aaKnown RBP22.04■■□□□ 1.12
NPHP4-210ENST00000506941 ADD2P35612 726 aa22.03■■□□□ 1.12
NPHP4-210ENST00000506941 FKBP1BP68106 108 aa22.03■■□□□ 1.12
NPHP4-210ENST00000506941 PICALMQ13492 652 aa22.03■■□□□ 1.12
NPHP4-210ENST00000506941 DEFB115Q30KQ5 88 aa22.03■■□□□ 1.12
NPHP4-210ENST00000506941 SUPT20HL1Q3ZLR7 823 aa22.03■■□□□ 1.12
NPHP4-210ENST00000506941 TMED8Q6PL24 325 aaPredicted RBP22.03■■□□□ 1.12
NPHP4-210ENST00000506941 PLEKHM2Q8IWE5 1019 aa22.03■■□□□ 1.12
NPHP4-210ENST00000506941 TEX11Q8IYF3 940 aa22.03■■□□□ 1.12
NPHP4-210ENST00000506941 KLRG1Q96E93 195 aa22.03■■□□□ 1.12
NPHP4-210ENST00000506941 ATAD5Q96QE3 1844 aa22.03■■□□□ 1.12
NPHP4-210ENST00000506941 UBE2Q2LH0YL09 131 aa22.02■■□□□ 1.12
NPHP4-210ENST00000506941 ENTPD3O75355 529 aa22.02■■□□□ 1.12
NPHP4-210ENST00000506941 BAG3O95817 575 aa22.02■■□□□ 1.12
NPHP4-210ENST00000506941 TTLL12Q14166 644 aaPredicted RBP22.02■■□□□ 1.12
NPHP4-210ENST00000506941 SH3BP5LQ7L8J4 393 aa22.02■■□□□ 1.12
NPHP4-210ENST00000506941 KBTBD3Q8NAB2 608 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms