RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 RGS22Q8NE09 1264 aa19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 L1RE1Q9UN81 338 aa19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 PHF8Q9UPP1 1060 aa19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 POTEB2H3BUK9 544 aa19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 ADKP55263 362 aaKnown RBP19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 NEXNQ0ZGT2 675 aa19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 PLEKHO1Q53GL0 409 aaPredicted RBP19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 METTL16Q86W50 562 aaKnown RBP19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 FOXP4Q8IVH2 680 aaPredicted RBP19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 GOLGA6L1Q8N7Z2 621 aa19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 PDILTQ8N807 584 aa19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 MRPL44Q9H9J2 332 aaKnown RBP19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 HPS5Q9UPZ3 1129 aa19.61■□□□□ 0.73
SQSTM1-211ENST00000506690 RGPD2P0DJD1 1756 aa19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 MCM6Q14566 821 aa19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 NOM1Q5C9Z4 860 aaKnown RBP19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 CERS3Q8IU89 383 aa19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 SIPA1L3O60292 1781 aaPredicted RBP19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 BMP6P22004 513 aa19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 MAGEA9P43362 315 aa19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 PDE4BQ07343 736 aa19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 KARSQ15046 597 aaKnown RBP19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 RABL6Q3YEC7 729 aaPredicted RBP19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 ICE2Q659A1 982 aa19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 ANKRD24Q8TF21 1146 aa19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 DESI2Q9BSY9 194 aa19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 PAG1Q9NWQ8 432 aa19.6■□□□□ 0.73
SQSTM1-211ENST00000506690 PXDNQ92626 1479 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 GOLIM4O00461 696 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 EIF3JO75822 258 aaKnown RBP19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 ZNF18P17022 549 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 CDC27P30260 824 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 RESP18Q5W5W9 173 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 CEP112Q8N8E3 955 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 PNKPQ96T60 521 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 IRX2Q9BZI1 471 aaPredicted RBP19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 DDX60Q8IY21 1712 aaKnown RBP19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 MAST3O60307 1309 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 A0A1B0GUL7 405 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 PTPAQ15257 358 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 ESCO1Q5FWF5 840 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 METTL22Q9BUU2 404 aaPredicted RBP19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 ZSWIM4Q9H7M6 989 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 CDC23Q9UJX2 597 aa19.59■□□□□ 0.73
SQSTM1-211ENST00000506690 CCDC175P0C221 793 aa19.58■□□□□ 0.72
SQSTM1-211ENST00000506690 TUBB4BP68371 445 aa19.58■□□□□ 0.72
SQSTM1-211ENST00000506690 JMYQ8N9B5 988 aa19.58■□□□□ 0.72
SQSTM1-211ENST00000506690 PCDHA5Q9Y5H7 936 aa19.58■□□□□ 0.72
SQSTM1-211ENST00000506690 N4BP1O75113 896 aaKnown RBP19.57■□□□□ 0.72
SQSTM1-211ENST00000506690 ERLIN1O75477 346 aa19.57■□□□□ 0.72
SQSTM1-211ENST00000506690 AMOTQ4VCS5 1084 aa19.57■□□□□ 0.72
SQSTM1-211ENST00000506690 TTLL5Q6EMB2 1281 aa19.57■□□□□ 0.72
SQSTM1-211ENST00000506690 FOXR1Q6PIV2 292 aa19.57■□□□□ 0.72
SQSTM1-211ENST00000506690 MKRN1Q9UHC7 482 aaKnown RBP19.57■□□□□ 0.72
SQSTM1-211ENST00000506690 FAN1Q9Y2M0 1017 aa19.57■□□□□ 0.72
SQSTM1-211ENST00000506690 KLF18A0A0U1RQI7 1052 aa19.57■□□□□ 0.72
SQSTM1-211ENST00000506690 LONRF3Q496Y0 759 aa19.57■□□□□ 0.72
SQSTM1-211ENST00000506690 MYD88Q99836 296 aa19.57■□□□□ 0.72
SQSTM1-211ENST00000506690 ABCB6Q9NP58 842 aa19.57■□□□□ 0.72
SQSTM1-211ENST00000506690 NWD2Q9ULI1 1742 aa19.57■□□□□ 0.72
SQSTM1-211ENST00000506690 GOLGA8BA8MQT2 603 aa19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 MTF1Q14872 753 aa19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 CCDC102BQ68D86 513 aa19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 ELOA2Q8IYF1 753 aaPredicted RBP19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 ZFP91Q96JP5 570 aaPredicted RBP19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 PUF60Q9UHX1 559 aaKnown RBP19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 C4AP0C0L4 1744 aa19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 C4BP0C0L5 1744 aa19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 TUBB2AQ13885 445 aa19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 C1orf141Q5JVX7 400 aa19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 MAP3K14Q99558 947 aa19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 TUBB2BQ9BVA1 445 aa19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 NFAT5O94916 1531 aa19.56■□□□□ 0.72
SQSTM1-211ENST00000506690 EIF3CLB5ME19 914 aaKnown RBP19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 GTF2A1P52655 376 aaPredicted RBP19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 MDM2Q00987 491 aaPredicted RBP19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 HSP90AA4PQ58FG1 418 aa19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 PACS2Q86VP3 889 aa19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 PANX2Q96RD6 677 aa19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 EIF3CQ99613 913 aaKnown RBP19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 AKAP2Q9Y2D5 859 aa19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 CPLX1O14810 134 aa19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 TTC31Q49AM3 519 aaPredicted RBP19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 ARHGEF25Q86VW2 580 aa19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 CNNM3Q8NE01 707 aa19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 FAM71BQ8TC56 605 aa19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 SUGCTQ9HAC7 445 aa19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 NFE2L3Q9Y4A8 694 aa19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 ADGRG1Q9Y653 693 aa19.55■□□□□ 0.72
SQSTM1-211ENST00000506690 RNF113AO15541 343 aaKnown RBP19.54■□□□□ 0.72
SQSTM1-211ENST00000506690 PRC1O43663 620 aa19.54■□□□□ 0.72
SQSTM1-211ENST00000506690 VPS37DQ86XT2 251 aa19.54■□□□□ 0.72
SQSTM1-211ENST00000506690 MB21D2Q8IYB1 491 aaPredicted RBP19.54■□□□□ 0.72
SQSTM1-211ENST00000506690 ENOX1Q8TC92 643 aaKnown RBP19.54■□□□□ 0.72
SQSTM1-211ENST00000506690 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.54■□□□□ 0.72
SQSTM1-211ENST00000506690 RAI14Q9P0K7 980 aa19.54■□□□□ 0.72
SQSTM1-211ENST00000506690 SOWAHDA6NJG2 315 aa19.54■□□□□ 0.72
SQSTM1-211ENST00000506690 M0R2C6 588 aa19.54■□□□□ 0.72
SQSTM1-211ENST00000506690 CORO7P57737 925 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms