RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 NDUFB9Q9Y6M9 179 aa13.68□□□□□ -0.22
SGCA-205ENST00000505964 COL1A1P02452 1464 aaPredicted RBP13.67□□□□□ -0.22
SGCA-205ENST00000505964 RAD50Q92878 1312 aa13.67□□□□□ -0.22
SGCA-205ENST00000505964 EPB41L2O43491 1005 aaKnown RBP13.67□□□□□ -0.22
SGCA-205ENST00000505964 WASHC4Q2M389 1173 aa13.67□□□□□ -0.22
SGCA-205ENST00000505964 TMED8Q6PL24 325 aaPredicted RBP13.67□□□□□ -0.22
SGCA-205ENST00000505964 PI16Q6UXB8 463 aa13.67□□□□□ -0.22
SGCA-205ENST00000505964 DCPSQ96C86 337 aaKnown RBP13.67□□□□□ -0.22
SGCA-205ENST00000505964 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.67□□□□□ -0.22
SGCA-205ENST00000505964 COA1Q9GZY4 146 aa13.67□□□□□ -0.22
SGCA-205ENST00000505964 UPF2Q9HAU5 1272 aaKnown RBP13.67□□□□□ -0.22
SGCA-205ENST00000505964 CD209Q9NNX6 404 aa13.67□□□□□ -0.22
SGCA-205ENST00000505964 SAGE1Q9NXZ1 904 aa13.67□□□□□ -0.22
SGCA-205ENST00000505964 ZNF646O15015 1829 aaPredicted RBP13.67□□□□□ -0.22
SGCA-205ENST00000505964 ASTN2O75129 1339 aaPredicted RBP13.66□□□□□ -0.22
SGCA-205ENST00000505964 SALL1Q9NSC2 1324 aa13.66□□□□□ -0.22
SGCA-205ENST00000505964 RNF113AO15541 343 aaKnown RBP13.66□□□□□ -0.22
SGCA-205ENST00000505964 FRAT2O75474 233 aaPredicted RBP13.66□□□□□ -0.22
SGCA-205ENST00000505964 REC8O95072 547 aa13.66□□□□□ -0.22
SGCA-205ENST00000505964 SEC24BO95487 1268 aa13.66□□□□□ -0.22
SGCA-205ENST00000505964 DOK7Q18PE1 504 aa13.66□□□□□ -0.22
SGCA-205ENST00000505964 PRPF38BQ5VTL8 546 aaKnown RBP13.66□□□□□ -0.22
SGCA-205ENST00000505964 CCDC102AQ96A19 550 aa13.66□□□□□ -0.22
SGCA-205ENST00000505964 CSRNP1Q96S65 589 aa13.66□□□□□ -0.22
SGCA-205ENST00000505964 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
SGCA-205ENST00000505964 SGSM2O43147 1006 aa13.65□□□□□ -0.22
SGCA-205ENST00000505964 SLC10A3P09131 477 aa13.65□□□□□ -0.22
SGCA-205ENST00000505964 MAP3K12Q12852 859 aa13.65□□□□□ -0.22
SGCA-205ENST00000505964 CTU1Q7Z7A3 348 aaKnown RBP13.65□□□□□ -0.22
SGCA-205ENST00000505964 ZGPATQ8N5A5 531 aaKnown RBP13.65□□□□□ -0.22
SGCA-205ENST00000505964 WDR66Q8TBY9 1149 aa13.65□□□□□ -0.22
SGCA-205ENST00000505964 DPF2Q92785 391 aa13.65□□□□□ -0.22
SGCA-205ENST00000505964 PIH1D3Q9NQM4 214 aaKnown RBP13.65□□□□□ -0.22
SGCA-205ENST00000505964 HELLSQ9NRZ9 838 aa13.65□□□□□ -0.22
SGCA-205ENST00000505964 GGA3Q9NZ52 723 aa13.65□□□□□ -0.22
SGCA-205ENST00000505964 FAM205AQ6ZU69 1335 aa13.64□□□□□ -0.23
SGCA-205ENST00000505964 ECE2O60344 883 aa13.64□□□□□ -0.23
SGCA-205ENST00000505964 NMIQ13287 307 aaPredicted RBP13.64□□□□□ -0.23
SGCA-205ENST00000505964 UBE3CQ15386 1083 aa13.64□□□□□ -0.23
SGCA-205ENST00000505964 KIF4BQ2VIQ3 1234 aa13.64□□□□□ -0.23
SGCA-205ENST00000505964 ZMYM1Q5SVZ6 1142 aa13.64□□□□□ -0.23
SGCA-205ENST00000505964 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
SGCA-205ENST00000505964 IQSEC3Q9UPP2 1182 aaPredicted RBP13.64□□□□□ -0.23
SGCA-205ENST00000505964 MYH2Q9UKX2 1941 aa13.64□□□□□ -0.23
SGCA-205ENST00000505964 ADD2P35612 726 aa13.63□□□□□ -0.23
SGCA-205ENST00000505964 MFAP1P55081 439 aaKnown RBP13.63□□□□□ -0.23
SGCA-205ENST00000505964 MCMDC2Q4G0Z9 681 aa13.63□□□□□ -0.23
SGCA-205ENST00000505964 SPTY2D1Q68D10 685 aaPredicted RBP13.63□□□□□ -0.23
SGCA-205ENST00000505964 PODNQ7Z5L7 613 aa13.63□□□□□ -0.23
SGCA-205ENST00000505964 RASAL3Q86YV0 1011 aa13.63□□□□□ -0.23
SGCA-205ENST00000505964 TBC1D22AQ8WUA7 517 aa13.63□□□□□ -0.23
SGCA-205ENST00000505964 APPBP2Q92624 585 aa13.63□□□□□ -0.23
SGCA-205ENST00000505964 CDCA5Q96FF9 252 aa13.63□□□□□ -0.23
SGCA-205ENST00000505964 SCAF8Q9UPN6 1271 aaKnown RBP13.63□□□□□ -0.23
SGCA-205ENST00000505964 HPS5Q9UPZ3 1129 aa13.63□□□□□ -0.23
SGCA-205ENST00000505964 PAPPA2Q9BXP8 1791 aa13.63□□□□□ -0.23
SGCA-205ENST00000505964 A0A0D9SFI3 127 aa13.62□□□□□ -0.23
SGCA-205ENST00000505964 IDH1O75874 414 aaKnown RBP13.62□□□□□ -0.23
SGCA-205ENST00000505964 SLC9C2Q5TAH2 1124 aa13.62□□□□□ -0.23
SGCA-205ENST00000505964 SULF1Q8IWU6 871 aa13.62□□□□□ -0.23
SGCA-205ENST00000505964 FAM227BQ96M60 508 aa13.62□□□□□ -0.23
SGCA-205ENST00000505964 LRP2BPQ9P2M1 347 aa13.62□□□□□ -0.23
SGCA-205ENST00000505964 G3V3G9 751 aa13.61□□□□□ -0.23
SGCA-205ENST00000505964 PDE6AP16499 860 aa13.61□□□□□ -0.23
SGCA-205ENST00000505964 RPS12P25398 132 aaKnown RBP13.61□□□□□ -0.23
SGCA-205ENST00000505964 CHAF1AQ13111 956 aaPredicted RBP13.61□□□□□ -0.23
SGCA-205ENST00000505964 DCAF8Q5TAQ9 597 aa13.61□□□□□ -0.23
SGCA-205ENST00000505964 KIAA1211Q6ZU35 1233 aa13.61□□□□□ -0.23
SGCA-205ENST00000505964 MOB2Q70IA6 237 aa13.61□□□□□ -0.23
SGCA-205ENST00000505964 ERICH6Q7L0X2 663 aa13.61□□□□□ -0.23
SGCA-205ENST00000505964 USP26Q9BXU7 913 aa13.61□□□□□ -0.23
SGCA-205ENST00000505964 ABCF2Q9UG63 623 aa13.61□□□□□ -0.23
SGCA-205ENST00000505964 KIAA0100Q14667 2235 aaKnown RBP13.61□□□□□ -0.23
SGCA-205ENST00000505964 TCRBV5S4A2TA0A5A2 114 aa13.6□□□□□ -0.23
SGCA-205ENST00000505964 TBC1D8O95759 1140 aa13.6□□□□□ -0.23
SGCA-205ENST00000505964 RBM25P49756 843 aaKnown RBP13.6□□□□□ -0.23
SGCA-205ENST00000505964 FKBP1AP62942 108 aaKnown RBP13.6□□□□□ -0.23
SGCA-205ENST00000505964 ANGEL2Q5VTE6 544 aaKnown RBP13.6□□□□□ -0.23
SGCA-205ENST00000505964 TBC1D32Q96NH3 1257 aa13.6□□□□□ -0.23
SGCA-205ENST00000505964 C22orf23Q9BZE7 217 aa13.6□□□□□ -0.23
SGCA-205ENST00000505964 IL25Q9H293 177 aa13.6□□□□□ -0.23
SGCA-205ENST00000505964 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
SGCA-205ENST00000505964 RAI14Q9P0K7 980 aa13.6□□□□□ -0.23
SGCA-205ENST00000505964 HDAC9Q9UKV0 1011 aa13.6□□□□□ -0.23
SGCA-205ENST00000505964 SUGT1Q9Y2Z0 365 aa13.6□□□□□ -0.23
SGCA-205ENST00000505964 MAST3O60307 1309 aa13.6□□□□□ -0.23
SGCA-205ENST00000505964 CCDC171Q6TFL3 1326 aa13.6□□□□□ -0.23
SGCA-205ENST00000505964 ZNF532Q9HCE3 1301 aa13.6□□□□□ -0.23
SGCA-205ENST00000505964 MAGEB6Q8N7X4 407 aa13.59□□□□□ -0.23
SGCA-205ENST00000505964 ZNF296Q8WUU4 475 aaPredicted RBP13.59□□□□□ -0.23
SGCA-205ENST00000505964 LSG1Q9H089 658 aaKnown RBP13.59□□□□□ -0.23
SGCA-205ENST00000505964 CHGBP05060 677 aa13.58□□□□□ -0.24
SGCA-205ENST00000505964 LDHBP07195 334 aaKnown RBP13.58□□□□□ -0.24
SGCA-205ENST00000505964 VIL1P09327 827 aaKnown RBP13.58□□□□□ -0.24
SGCA-205ENST00000505964 GTF2IP78347 998 aa13.58□□□□□ -0.24
SGCA-205ENST00000505964 MKRN3Q13064 507 aaKnown RBP13.58□□□□□ -0.24
SGCA-205ENST00000505964 STRIP1Q5VSL9 837 aa13.58□□□□□ -0.24
SGCA-205ENST00000505964 PRAMEF18Q5VWM3 479 aa13.58□□□□□ -0.24
SGCA-205ENST00000505964 TTLL5Q6EMB2 1281 aa13.58□□□□□ -0.24
SGCA-205ENST00000505964 NAA16Q6N069 864 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms