RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 COL9A3Q14050 684 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-205ENST00000505458 FOXD4L6Q3SYB3 417 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-205ENST00000505458 FOXD4L3Q6VB84 417 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-205ENST00000505458 DDX11Q96FC9 970 aa13.23□□□□□ -0.29
NFKB1-205ENST00000505458 FAM84BQ96KN1 310 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-205ENST00000505458 PANK2Q9BZ23 570 aa13.23□□□□□ -0.29
NFKB1-205ENST00000505458 NUP62CLQ9H1M0 184 aa13.23□□□□□ -0.29
NFKB1-205ENST00000505458 ARMT1Q9H993 441 aa13.23□□□□□ -0.29
NFKB1-205ENST00000505458 SRP68Q9UHB9 627 aaKnown RBP13.23□□□□□ -0.29
NFKB1-205ENST00000505458 CCT2P78371 535 aaKnown RBP13.23□□□□□ -0.29
NFKB1-205ENST00000505458 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
NFKB1-205ENST00000505458 CELF1Q92879 486 aaKnown RBP13.23□□□□□ -0.29
NFKB1-205ENST00000505458 EPB41L4AQ9HCS5 686 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-205ENST00000505458 ORC3Q9UBD5 711 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-205ENST00000505458 NSFL1CQ9UNZ2 370 aaKnown RBP13.23□□□□□ -0.29
NFKB1-205ENST00000505458 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
NFKB1-205ENST00000505458 CCDC192P0DO97 292 aa13.23□□□□□ -0.29
NFKB1-205ENST00000505458 GSTO1P78417 241 aa13.23□□□□□ -0.29
NFKB1-205ENST00000505458 TMEM67Q5HYA8 995 aa13.23□□□□□ -0.29
NFKB1-205ENST00000505458 ESR2Q92731 530 aa13.23□□□□□ -0.29
NFKB1-205ENST00000505458 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
NFKB1-205ENST00000505458 XDHP47989 1333 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 APOA5Q6Q788 366 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 WDR66Q8TBY9 1149 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 NBPF3Q9H094 633 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 RBSNQ9H1K0 784 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 LAMB1P07942 1786 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 HSPA1LP34931 641 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 MAP3K11Q16584 847 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 NFXL1Q6ZNB6 911 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 CRNKL1Q9BZJ0 848 aaKnown RBP13.22□□□□□ -0.29
NFKB1-205ENST00000505458 HPS5Q9UPZ3 1129 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 YEATS4O95619 227 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 TRIM29Q14134 588 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 LCORLQ8N3X6 602 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 FBXO18Q8NFZ0 1043 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 ABCF2Q9UG63 623 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 SLC12A7Q9Y666 1083 aa13.22□□□□□ -0.29
NFKB1-205ENST00000505458 TNRC6CQ9HCJ0 1690 aaKnown RBP13.21□□□□□ -0.29
NFKB1-205ENST00000505458 GYG1P46976 350 aa13.21□□□□□ -0.29
NFKB1-205ENST00000505458 C3orf67Q6ZVT6 689 aa13.21□□□□□ -0.29
NFKB1-205ENST00000505458 ZNF804AQ7Z570 1209 aa13.21□□□□□ -0.29
NFKB1-205ENST00000505458 KCNG4Q8TDN1 519 aa13.21□□□□□ -0.29
NFKB1-205ENST00000505458 CHAMP1Q96JM3 812 aa13.21□□□□□ -0.29
NFKB1-205ENST00000505458 PDLIM2Q96JY6 352 aa13.21□□□□□ -0.29
NFKB1-205ENST00000505458 IFIT3O14879 490 aaKnown RBP13.21□□□□□ -0.29
NFKB1-205ENST00000505458 PPARAQ07869 468 aa13.21□□□□□ -0.29
NFKB1-205ENST00000505458 ATP8A2Q9NTI2 1148 aa13.21□□□□□ -0.29
NFKB1-205ENST00000505458 GOLGA8AA7E2F4 631 aa13.21□□□□□ -0.3
NFKB1-205ENST00000505458 B4E1Z4 1266 aa13.21□□□□□ -0.3
NFKB1-205ENST00000505458 IGDCC4Q8TDY8 1250 aa13.21□□□□□ -0.3
NFKB1-205ENST00000505458 RPGRQ92834 1020 aaKnown RBP13.21□□□□□ -0.3
NFKB1-205ENST00000505458 RBM17Q96I25 401 aaKnown RBP13.21□□□□□ -0.3
NFKB1-205ENST00000505458 A0A0G2JLW4 131 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 CALM1P0DP23 149 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 CALM2P0DP24 149 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 CALM3P0DP25 149 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 NFIXQ14938 502 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 WTAPQ15007 396 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 CCDC73Q6ZRK6 1079 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 TRIM22Q8IYM9 498 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 UBAC1Q9BSL1 405 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 LY9Q9HBG7 655 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 COL1A1P02452 1464 aaPredicted RBP13.2□□□□□ -0.3
NFKB1-205ENST00000505458 NEDD4P46934 1319 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 LDHCP07864 332 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 CCDC178Q5BJE1 867 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 CHST3Q7LGC8 479 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 KRT27Q7Z3Y8 459 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 BICD2Q8TD16 824 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
NFKB1-205ENST00000505458 CLSTN2Q9H4D0 955 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 QTRT2Q9H974 415 aaKnown RBP13.2□□□□□ -0.3
NFKB1-205ENST00000505458 NCOA5Q9HCD5 579 aaKnown RBP13.2□□□□□ -0.3
NFKB1-205ENST00000505458 RTEL1Q9NZ71 1219 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 ARPP21Q9UBL0 812 aaPredicted RBP13.2□□□□□ -0.3
NFKB1-205ENST00000505458 ATP2B4P23634 1241 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 CYB5R4Q7L1T6 521 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 FLAD1Q8NFF5 587 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 POLR3EQ9NVU0 708 aa13.2□□□□□ -0.3
NFKB1-205ENST00000505458 TM4SF1P30408 202 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 IARSP41252 1262 aaKnown RBP13.19□□□□□ -0.3
NFKB1-205ENST00000505458 CRY2Q49AN0 593 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 RBM43Q6ZSC3 357 aaKnown RBP13.19□□□□□ -0.3
NFKB1-205ENST00000505458 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 DLEC1Q9Y238 1755 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 A0A1W2PQ27 194 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 A0A1W2PQ64 194 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 A0A1W2PQD8 194 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 BBOX1O75936 387 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 FGRP09769 529 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 IFNAR1P17181 557 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 NOL10Q9BSC4 688 aaKnown RBP13.19□□□□□ -0.3
NFKB1-205ENST00000505458 TNMDQ9H2S6 317 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 COL4A1P02462 1669 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 TAF1P21675 1872 aa13.19□□□□□ -0.3
NFKB1-205ENST00000505458 KDM4AO75164 1064 aa13.18□□□□□ -0.3
NFKB1-205ENST00000505458 FDPSP14324 419 aaKnown RBP13.18□□□□□ -0.3
NFKB1-205ENST00000505458 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
NFKB1-205ENST00000505458 AMOTL1Q8IY63 956 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms