RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 TIE1P35590 1138 aa5.65□□□□□ -1.5
CPNE4-204ENST00000505331 TNFAIP1Q13829 316 aa5.65□□□□□ -1.5
CPNE4-204ENST00000505331 HERVK_113Q902F9 699 aa5.65□□□□□ -1.5
CPNE4-204ENST00000505331 BADQ92934 168 aa5.65□□□□□ -1.5
CPNE4-204ENST00000505331 FBXW7Q969H0 707 aa5.65□□□□□ -1.5
CPNE4-204ENST00000505331 VEZTQ9HBM0 779 aa5.65□□□□□ -1.5
CPNE4-204ENST00000505331 SCUBE2Q9NQ36 999 aa5.65□□□□□ -1.5
CPNE4-204ENST00000505331 RRP7AQ9Y3A4 280 aaKnown RBP5.65□□□□□ -1.5
CPNE4-204ENST00000505331 LRRC37AA6NMS7 1700 aa5.65□□□□□ -1.51
CPNE4-204ENST00000505331 ZSWIM8A7E2V4 1837 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 XIRP2A4UGR9 3374 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 ALPK3Q96L96 1907 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 CLRN2A0PK11 232 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 MYL6BP14649 208 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 ATP2B4P23634 1241 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 PTPN5P54829 565 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 PPATQ06203 517 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 SKIV2LQ15477 1246 aaKnown RBP5.64□□□□□ -1.51
CPNE4-204ENST00000505331 HSP90AB3PQ58FF7 597 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 TTLL5Q6EMB2 1281 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 NLRP10Q86W26 655 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 FAM163AQ96GL9 167 aaPredicted RBP5.64□□□□□ -1.51
CPNE4-204ENST00000505331 COG5Q9UP83 839 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 SNCAIPQ9Y6H5 919 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 XDHP47989 1333 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 CLSPNQ9HAW4 1339 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 TAF1P21675 1872 aa5.64□□□□□ -1.51
CPNE4-204ENST00000505331 CYP2C8P10632 490 aa5.63□□□□□ -1.51
CPNE4-204ENST00000505331 RTP1P59025 263 aa5.63□□□□□ -1.51
CPNE4-204ENST00000505331 COL9A2Q14055 689 aaPredicted RBP5.63□□□□□ -1.51
CPNE4-204ENST00000505331 MAP3K21Q5TCX8 1036 aa5.63□□□□□ -1.51
CPNE4-204ENST00000505331 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.63□□□□□ -1.51
CPNE4-204ENST00000505331 MFSD14AQ96MC6 490 aa5.63□□□□□ -1.51
CPNE4-204ENST00000505331 SENP6Q9GZR1 1112 aaPredicted RBP5.63□□□□□ -1.51
CPNE4-204ENST00000505331 COA1Q9GZY4 146 aa5.63□□□□□ -1.51
CPNE4-204ENST00000505331 PRDM5Q9NQX1 630 aaPredicted RBP5.63□□□□□ -1.51
CPNE4-204ENST00000505331 TTLL13PA6NNM8 815 aa5.62□□□□□ -1.51
CPNE4-204ENST00000505331 ID4P47928 161 aa5.62□□□□□ -1.51
CPNE4-204ENST00000505331 TRIM32Q13049 653 aa5.62□□□□□ -1.51
CPNE4-204ENST00000505331 CFAP100Q494V2 611 aa5.62□□□□□ -1.51
CPNE4-204ENST00000505331 PRMT6Q96LA8 375 aaPredicted RBP5.62□□□□□ -1.51
CPNE4-204ENST00000505331 TEPSINQ96N21 525 aa5.62□□□□□ -1.51
CPNE4-204ENST00000505331 PRRX2Q99811 253 aa5.62□□□□□ -1.51
CPNE4-204ENST00000505331 PBX4Q9BYU1 374 aa5.62□□□□□ -1.51
CPNE4-204ENST00000505331 CD320Q9NPF0 282 aa5.62□□□□□ -1.51
CPNE4-204ENST00000505331 MED23Q9ULK4 1368 aa5.62□□□□□ -1.51
CPNE4-204ENST00000505331 PKD1L2Q7Z442 2459 aa5.62□□□□□ -1.51
CPNE4-204ENST00000505331 NEUROD1Q13562 356 aa5.61□□□□□ -1.51
CPNE4-204ENST00000505331 MOGSQ13724 837 aa5.61□□□□□ -1.51
CPNE4-204ENST00000505331 ACAP1Q15027 740 aa5.61□□□□□ -1.51
CPNE4-204ENST00000505331 SCN9AQ15858 1988 aa5.61□□□□□ -1.51
CPNE4-204ENST00000505331 DDX60LQ5H9U9 1706 aaKnown RBP5.61□□□□□ -1.51
CPNE4-204ENST00000505331 MORC1Q86VD1 984 aa5.61□□□□□ -1.51
CPNE4-204ENST00000505331 GJD3Q8N144 294 aa5.61□□□□□ -1.51
CPNE4-204ENST00000505331 MICALL1Q8N3F8 863 aa5.61□□□□□ -1.51
CPNE4-204ENST00000505331 ZKSCAN4Q969J2 545 aaPredicted RBP5.61□□□□□ -1.51
CPNE4-204ENST00000505331 WRNIP1Q96S55 665 aa5.61□□□□□ -1.51
CPNE4-204ENST00000505331 SIN3AQ96ST3 1273 aa5.61□□□□□ -1.51
CPNE4-204ENST00000505331 ATP11BQ9Y2G3 1177 aa5.61□□□□□ -1.51
CPNE4-204ENST00000505331 DCXO43602 365 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 PBX2P40425 430 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 TNNI2P48788 182 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 EPHB4P54760 987 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 GTF2IP78347 998 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 GPAT2Q6NUI2 795 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 CCDC129Q6ZRS4 1044 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 CDAN1Q8IWY9 1227 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 TRMT44Q8IYL2 757 aaKnown RBP5.6□□□□□ -1.51
CPNE4-204ENST00000505331 PRSS33Q8NF86 280 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 SMCR8Q8TEV9 937 aaPredicted RBP5.6□□□□□ -1.51
CPNE4-204ENST00000505331 TRIB2Q92519 343 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 HLA-CQ95604 372 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 HOOK2Q96ED9 719 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 CNTNAP3BQ96NU0 1288 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 CNTNAP3Q9BZ76 1288 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 PDLIM7Q9NR12 457 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 GJD2Q9UKL4 321 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 SLC45A1Q9Y2W3 748 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 PCDHAC2Q9Y5I4 1007 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 USP34Q70CQ2 3546 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 CFAP54Q96N23 3096 aa5.6□□□□□ -1.51
CPNE4-204ENST00000505331 RPAP1Q9BWH6 1393 aaPredicted RBP5.59□□□□□ -1.51
CPNE4-204ENST00000505331 TRIM43BA6NCK2 446 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 DNM1LO00429 736 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 CXCL11O14625 94 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 SEC24BO95487 1268 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 RBM5P52756 815 aaKnown RBP eCLIP5.59□□□□□ -1.51
CPNE4-204ENST00000505331 NUBP1P53384 320 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 FPGSQ05932 587 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 RAB30Q15771 203 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 SLC39A5Q6ZMH5 540 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 HFE2Q6ZVN8 426 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 FASTKD5Q7L8L6 764 aaKnown RBP5.59□□□□□ -1.51
CPNE4-204ENST00000505331 RTF1Q92541 710 aaKnown RBP5.59□□□□□ -1.51
CPNE4-204ENST00000505331 TRIM43Q96BQ3 446 aaPredicted RBP5.59□□□□□ -1.51
CPNE4-204ENST00000505331 FAM89AQ96GI7 184 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 TMEM39BQ9GZU3 492 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 IRF2BPLQ9H1B7 796 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 SLC28A3Q9HAS3 691 aa5.59□□□□□ -1.51
CPNE4-204ENST00000505331 ZNF70Q9UC06 446 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms