RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 RXRGP48443 463 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 CD151P48509 253 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 ROR1Q01973 937 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 MTMR1Q13613 665 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 TRIM29Q14134 588 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 TAF1CQ15572 869 aaPredicted RBP8.47□□□□□ -1.05
CDH9-202ENST00000505020 KLHL10Q6JEL2 608 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 CPLX2Q6PUV4 134 aaKnown RBP8.47□□□□□ -1.05
CDH9-202ENST00000505020 TRIM22Q8IYM9 498 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 THAP3Q8WTV1 239 aaPredicted RBP8.47□□□□□ -1.05
CDH9-202ENST00000505020 STRN4Q9NRL3 753 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 XPO7Q9UIA9 1087 aaKnown RBP8.47□□□□□ -1.05
CDH9-202ENST00000505020 PCDHGB3Q9Y5G1 929 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 PTCH2Q9Y6C5 1203 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 C9IYK1 514 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 APAF1O14727 1248 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 TCIRG1Q13488 830 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 KIF22Q14807 665 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 SLC10A5Q5PT55 438 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 C16orf87Q6PH81 154 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 RNF180Q86T96 592 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 CHMP7Q8WUX9 453 aaPredicted RBP8.47□□□□□ -1.05
CDH9-202ENST00000505020 HVCN1Q96D96 273 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 FAM167BQ9BTA0 163 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 ABCG4Q9H172 646 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 DHX36Q9H2U1 1008 aaKnown RBP8.47□□□□□ -1.05
CDH9-202ENST00000505020 SMYD2Q9NRG4 433 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 DCAF16Q9NXF7 216 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 ZFATQ9P243 1243 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 STRIP2Q9ULQ0 834 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 BOLA1Q9Y3E2 137 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 IKBKGQ9Y6K9 419 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 IRS4O14654 1257 aaPredicted RBP8.46□□□□□ -1.06
CDH9-202ENST00000505020 PDE8AO60658 829 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 ARIH2O95376 493 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 KIF5BP33176 963 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 GTF2A2P52657 109 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 BPIFB3P59826 476 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 CALD1Q05682 793 aaKnown RBP8.46□□□□□ -1.06
CDH9-202ENST00000505020 RASGRF1Q13972 1273 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 NUDT18Q6ZVK8 323 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 DAAM2Q86T65 1068 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 PASD1Q8IV76 773 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 NIM1KQ8IY84 436 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 SYNPOQ8N3V7 929 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 CPLX3Q8WVH0 158 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 MRGBPQ9NV56 204 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 KBTBD4Q9NVX7 518 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 TMEM51Q9NW97 253 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 DOLKQ9UPQ8 538 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 PCDHGA11Q9Y5H2 935 aa8.46□□□□□ -1.06
CDH9-202ENST00000505020 K7ENM7 598 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 RPL17P18621 184 aaKnown RBP8.45□□□□□ -1.06
CDH9-202ENST00000505020 COPAP53621 1224 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 APBA1Q02410 837 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 TBX2Q13207 712 aaPredicted RBP8.45□□□□□ -1.06
CDH9-202ENST00000505020 ELF2Q15723 593 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 HSP90B2PQ58FF3 399 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 WWC2Q6AWC2 1192 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 SWSAP1Q6NVH7 229 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 WDR66Q8TBY9 1149 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 MTMR8Q96EF0 704 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 ANO9A1A5B4 782 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 J3KRW8 73 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 TOR1BO14657 336 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 RAC2P15153 192 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 ZNF280AP59817 542 aaPredicted RBP8.45□□□□□ -1.06
CDH9-202ENST00000505020 COBLL1Q53SF7 1204 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 ZBTB46Q86UZ6 589 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 SPNS2Q8IVW8 549 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 JMYQ8N9B5 988 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 GIMAP8Q8ND71 665 aaPredicted RBP8.45□□□□□ -1.06
CDH9-202ENST00000505020 IPCEF1Q8WWN9 437 aaPredicted RBP8.45□□□□□ -1.06
CDH9-202ENST00000505020 GJA10Q969M2 543 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 CSRNP1Q96S65 589 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 YIPF4Q9BSR8 244 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 CCDC8Q9H0W5 538 aaPredicted RBP8.45□□□□□ -1.06
CDH9-202ENST00000505020 FAM50BQ9Y247 325 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 AFG3L2Q9Y4W6 797 aa8.45□□□□□ -1.06
CDH9-202ENST00000505020 OPLAHO14841 1288 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 SMAD7O15105 426 aaKnown RBP8.44□□□□□ -1.06
CDH9-202ENST00000505020 RFPL1O75677 317 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 SETSIPP0DME0 302 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 KRT72Q14CN4 511 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 ZC3H12BQ5HYM0 836 aaKnown RBP8.44□□□□□ -1.06
CDH9-202ENST00000505020 AKAP4Q5JQC9 854 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 CCDC129Q6ZRS4 1044 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 OTOP3Q7RTS5 596 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 ATCAYQ86WG3 371 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 AFAP1L2Q8N4X5 818 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 NKAPQ8N5F7 415 aaKnown RBP8.44□□□□□ -1.06
CDH9-202ENST00000505020 ZNF454Q8N9F8 522 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 IL17REQ8NFR9 667 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 NINJ1Q92982 152 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 ITFG2Q969R8 447 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 CAMKK2Q96RR4 588 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 RHOBTB2Q9BYZ6 727 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 PRDM11Q9NQV5 511 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 TBK1Q9UHD2 729 aa8.44□□□□□ -1.06
CDH9-202ENST00000505020 ESPNB1AK53 854 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms