RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ATP8A2Q9NTI2 1148 aa12.05□□□□□ -0.48
DDX41-203ENST00000504781 SLC4A4Q9Y6R1 1079 aa12.05□□□□□ -0.48
DDX41-203ENST00000504781 SBF1O95248 1867 aa12.05□□□□□ -0.48
DDX41-203ENST00000504781 CCDC88AQ3V6T2 1871 aa12.05□□□□□ -0.48
DDX41-203ENST00000504781 MYH13Q9UKX3 1938 aa12.05□□□□□ -0.48
DDX41-203ENST00000504781 E7EWF7 191 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 CD2BP2O95400 341 aaKnown RBP12.04□□□□□ -0.48
DDX41-203ENST00000504781 VEGFAP15692 232 aaPredicted RBP12.04□□□□□ -0.48
DDX41-203ENST00000504781 PLCG2P16885 1265 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 RPS6KB1P23443 525 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 PRDX5P30044 214 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 GTF2IP78347 998 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 HTRA3P83110 453 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 KIAA2012Q0VF49 1180 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 STRIP1Q5VSL9 837 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 ZNF384Q8TF68 577 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 CHMP4CQ96CF2 233 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 INTS4Q96HW7 963 aaKnown RBP12.04□□□□□ -0.48
DDX41-203ENST00000504781 GPR101Q96P66 508 aaPredicted RBP12.04□□□□□ -0.48
DDX41-203ENST00000504781 NOL10Q9BSC4 688 aaKnown RBP12.04□□□□□ -0.48
DDX41-203ENST00000504781 UPF3BQ9BZI7 483 aaKnown RBP12.04□□□□□ -0.48
DDX41-203ENST00000504781 NAPBQ9H115 298 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 TAOK3Q9H2K8 898 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 ARMT1Q9H993 441 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 DLEC1Q9Y238 1755 aa12.04□□□□□ -0.48
DDX41-203ENST00000504781 ZC3H4Q9UPT8 1303 aaKnown RBP12.04□□□□□ -0.48
DDX41-203ENST00000504781 COL11A2P13942 1736 aaPredicted RBP12.03□□□□□ -0.48
DDX41-203ENST00000504781 COL1A1P02452 1464 aaPredicted RBP12.03□□□□□ -0.48
DDX41-203ENST00000504781 GPR75-ASB3A0A0A6YYF3 556 aa12.03□□□□□ -0.48
DDX41-203ENST00000504781 HSP90AA1P07900 732 aaKnown RBP12.03□□□□□ -0.48
DDX41-203ENST00000504781 PCP11498 1178 aaKnown RBP12.03□□□□□ -0.48
DDX41-203ENST00000504781 NT5C2P49902 561 aa12.03□□□□□ -0.48
DDX41-203ENST00000504781 HDLBPQ00341 1268 aaKnown RBP12.03□□□□□ -0.48
DDX41-203ENST00000504781 EXOSC10Q01780 885 aaKnown RBP12.03□□□□□ -0.48
DDX41-203ENST00000504781 FSTL1Q12841 308 aa12.03□□□□□ -0.48
DDX41-203ENST00000504781 TRDNQ13061 729 aa12.03□□□□□ -0.48
DDX41-203ENST00000504781 CUL4AQ13619 759 aa12.03□□□□□ -0.48
DDX41-203ENST00000504781 MFSD14BQ5SR56 506 aa12.03□□□□□ -0.48
DDX41-203ENST00000504781 OLFM4Q6UX06 510 aa12.03□□□□□ -0.48
DDX41-203ENST00000504781 SMC1BQ8NDV3 1235 aa12.03□□□□□ -0.48
DDX41-203ENST00000504781 NCOA7Q8NI08 942 aa12.03□□□□□ -0.48
DDX41-203ENST00000504781 CRNKL1Q9BZJ0 848 aaKnown RBP12.03□□□□□ -0.48
DDX41-203ENST00000504781 SH2B1Q9NRF2 756 aaPredicted RBP12.03□□□□□ -0.48
DDX41-203ENST00000504781 ANAPC4Q9UJX5 808 aa12.03□□□□□ -0.48
DDX41-203ENST00000504781 WDR19Q8NEZ3 1342 aa12.03□□□□□ -0.48
DDX41-203ENST00000504781 DOK7Q18PE1 504 aa12.02□□□□□ -0.49
DDX41-203ENST00000504781 SBK1Q52WX2 424 aa12.02□□□□□ -0.49
DDX41-203ENST00000504781 ADGRA1Q86SQ6 560 aa12.02□□□□□ -0.49
DDX41-203ENST00000504781 SLC51AQ86UW1 340 aa12.02□□□□□ -0.49
DDX41-203ENST00000504781 LCORLQ8N3X6 602 aa12.02□□□□□ -0.49
DDX41-203ENST00000504781 MIGA1Q8NAN2 632 aa12.02□□□□□ -0.49
DDX41-203ENST00000504781 TMX3Q96JJ7 454 aa12.02□□□□□ -0.49
DDX41-203ENST00000504781 CNNM2Q9H8M5 875 aa12.02□□□□□ -0.49
DDX41-203ENST00000504781 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
DDX41-203ENST00000504781 CACNA1SQ13698 1873 aa12.02□□□□□ -0.49
DDX41-203ENST00000504781 DUOX1Q9NRD9 1551 aa12.01□□□□□ -0.49
DDX41-203ENST00000504781 USP17L3A6NCW0 530 aa12.01□□□□□ -0.49
DDX41-203ENST00000504781 USP17L4A6NCW7 530 aa12.01□□□□□ -0.49
DDX41-203ENST00000504781 PDIA4P13667 645 aaKnown RBP12.01□□□□□ -0.49
DDX41-203ENST00000504781 MCM5P33992 734 aa12.01□□□□□ -0.49
DDX41-203ENST00000504781 AK2P54819 239 aa12.01□□□□□ -0.49
DDX41-203ENST00000504781 HHIPL2Q6UWX4 724 aa12.01□□□□□ -0.49
DDX41-203ENST00000504781 USP17L1Q7RTZ2 530 aa12.01□□□□□ -0.49
DDX41-203ENST00000504781 MTA3Q9BTC8 594 aa12.01□□□□□ -0.49
DDX41-203ENST00000504781 AGXT2Q9BYV1 514 aa12.01□□□□□ -0.49
DDX41-203ENST00000504781 KRT23Q9C075 422 aa12.01□□□□□ -0.49
DDX41-203ENST00000504781 RNF41Q9H4P4 317 aaPredicted RBP12.01□□□□□ -0.49
DDX41-203ENST00000504781 SNED1Q8TER0 1413 aa12.01□□□□□ -0.49
DDX41-203ENST00000504781 PRKAB2O43741 272 aa12□□□□□ -0.49
DDX41-203ENST00000504781 ECE2O60344 883 aa12□□□□□ -0.49
DDX41-203ENST00000504781 DDNO94850 711 aaPredicted RBP12□□□□□ -0.49
DDX41-203ENST00000504781 TDO2P48775 406 aa12□□□□□ -0.49
DDX41-203ENST00000504781 MMP14P50281 582 aa12□□□□□ -0.49
DDX41-203ENST00000504781 DYNLL1P63167 89 aaKnown RBP12□□□□□ -0.49
DDX41-203ENST00000504781 AKNAD1Q5T1N1 836 aa12□□□□□ -0.49
DDX41-203ENST00000504781 MFSD6Q6ZSS7 791 aa12□□□□□ -0.49
DDX41-203ENST00000504781 DNAJC5GQ8N7S2 189 aa12□□□□□ -0.49
DDX41-203ENST00000504781 AATFQ9NY61 560 aaKnown RBP eCLIP12□□□□□ -0.49
DDX41-203ENST00000504781 CHMP5Q9NZZ3 219 aa12□□□□□ -0.49
DDX41-203ENST00000504781 MROH7-TTC4A0A0A0MT08 1334 aa12□□□□□ -0.49
DDX41-203ENST00000504781 PPIP5K2O43314 1243 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 SLC3A2P08195 630 aaKnown RBP11.99□□□□□ -0.49
DDX41-203ENST00000504781 FGRP09769 529 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 CPA1P15085 419 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 DDIT3P35638 169 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 EVCP57679 992 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 MAPK8IP2Q13387 824 aaPredicted RBP11.99□□□□□ -0.49
DDX41-203ENST00000504781 AOC3Q16853 763 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 STOX1Q6ZVD7 989 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 RALYLQ86SE5 291 aaKnown RBP11.99□□□□□ -0.49
DDX41-203ENST00000504781 TMTC2Q8N394 836 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 STAG1Q8WVM7 1258 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 ZNF274Q96GC6 653 aaPredicted RBP11.99□□□□□ -0.49
DDX41-203ENST00000504781 DBNDD1Q9H9R9 158 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 ZNF277Q9NRM2 450 aaPredicted RBP11.99□□□□□ -0.49
DDX41-203ENST00000504781 JAG2Q9Y219 1238 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.99□□□□□ -0.49
DDX41-203ENST00000504781 TAF6LQ9Y6J9 622 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 GAKO14976 1311 aa11.99□□□□□ -0.49
DDX41-203ENST00000504781 LTBP3Q9NS15 1303 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms