RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 DDX11L8A8MPP1 907 aa15.71■□□□□ 0.11
LMNA-220ENST00000504687 PFKFB2O60825 505 aa15.71■□□□□ 0.11
LMNA-220ENST00000504687 APPP05067 770 aa15.71■□□□□ 0.11
LMNA-220ENST00000504687 FGRP09769 529 aa15.71■□□□□ 0.11
LMNA-220ENST00000504687 PRDX5P30044 214 aa15.71■□□□□ 0.11
LMNA-220ENST00000504687 RALYLQ86SE5 291 aaKnown RBP15.71■□□□□ 0.11
LMNA-220ENST00000504687 C7orf43Q8WVR3 580 aa15.71■□□□□ 0.11
LMNA-220ENST00000504687 GTF3C6Q969F1 213 aa15.71■□□□□ 0.11
LMNA-220ENST00000504687 TMEM87BQ96K49 555 aa15.71■□□□□ 0.11
LMNA-220ENST00000504687 RNF41Q9H4P4 317 aaPredicted RBP15.71■□□□□ 0.11
LMNA-220ENST00000504687 FOCADQ5VW36 1801 aa15.71■□□□□ 0.1
LMNA-220ENST00000504687 C6orf229H3BNL8 230 aa15.7■□□□□ 0.1
LMNA-220ENST00000504687 FKBP1AP62942 108 aaKnown RBP15.7■□□□□ 0.1
LMNA-220ENST00000504687 CHAF1AQ13111 956 aaPredicted RBP15.7■□□□□ 0.1
LMNA-220ENST00000504687 SBK1Q52WX2 424 aa15.7■□□□□ 0.1
LMNA-220ENST00000504687 AKNAD1Q5T1N1 836 aa15.7■□□□□ 0.1
LMNA-220ENST00000504687 DPP8Q6V1X1 898 aaPredicted RBP15.7■□□□□ 0.1
LMNA-220ENST00000504687 NOL8Q76FK4 1167 aaKnown RBP15.7■□□□□ 0.1
LMNA-220ENST00000504687 TBC1D10CQ8IV04 446 aa15.7■□□□□ 0.1
LMNA-220ENST00000504687 SLF2Q8IX21 1173 aa15.7■□□□□ 0.1
LMNA-220ENST00000504687 RGS22Q8NE09 1264 aa15.7■□□□□ 0.1
LMNA-220ENST00000504687 CRNKL1Q9BZJ0 848 aaKnown RBP15.7■□□□□ 0.1
LMNA-220ENST00000504687 KRT23Q9C075 422 aa15.7■□□□□ 0.1
LMNA-220ENST00000504687 SMC3Q9UQE7 1217 aa15.7■□□□□ 0.1
LMNA-220ENST00000504687 ZDHHC9Q9Y397 364 aa15.7■□□□□ 0.1
LMNA-220ENST00000504687 WDR33Q9C0J8 1336 aaKnown RBP15.69■□□□□ 0.1
LMNA-220ENST00000504687 CDK5RAP2Q96SN8 1893 aa15.69■□□□□ 0.1
LMNA-220ENST00000504687 DDX60LQ5H9U9 1706 aaKnown RBP15.69■□□□□ 0.1
LMNA-220ENST00000504687 PSME4Q14997 1843 aa15.69■□□□□ 0.1
LMNA-220ENST00000504687 TDO2P48775 406 aa15.69■□□□□ 0.1
LMNA-220ENST00000504687 ANTXR2P58335 489 aa15.69■□□□□ 0.1
LMNA-220ENST00000504687 HAND2P61296 217 aa15.69■□□□□ 0.1
LMNA-220ENST00000504687 SLC51AQ86UW1 340 aa15.69■□□□□ 0.1
LMNA-220ENST00000504687 DZIP1Q86YF9 867 aaKnown RBP15.69■□□□□ 0.1
LMNA-220ENST00000504687 CCDC83Q8IWF9 413 aa15.69■□□□□ 0.1
LMNA-220ENST00000504687 MIGA1Q8NAN2 632 aa15.69■□□□□ 0.1
LMNA-220ENST00000504687 BRF1Q92994 677 aa15.69■□□□□ 0.1
LMNA-220ENST00000504687 ZC3H12CQ9C0D7 883 aaKnown RBP15.69■□□□□ 0.1
LMNA-220ENST00000504687 MROH7-TTC4A0A0A0MT08 1334 aa15.68■□□□□ 0.1
LMNA-220ENST00000504687 GAKO14976 1311 aa15.68■□□□□ 0.1
LMNA-220ENST00000504687 NID2Q14112 1375 aa15.68■□□□□ 0.1
LMNA-220ENST00000504687 PRC1O43663 620 aa15.68■□□□□ 0.1
LMNA-220ENST00000504687 PRKAB2O43741 272 aa15.68■□□□□ 0.1
LMNA-220ENST00000504687 BAG3O95817 575 aa15.68■□□□□ 0.1
LMNA-220ENST00000504687 PDCP20941 246 aa15.68■□□□□ 0.1
LMNA-220ENST00000504687 PPARAQ07869 468 aa15.68■□□□□ 0.1
LMNA-220ENST00000504687 PODNQ7Z5L7 613 aa15.68■□□□□ 0.1
LMNA-220ENST00000504687 SGMS1Q86VZ5 419 aa15.68■□□□□ 0.1
LMNA-220ENST00000504687 SMARCC2Q8TAQ2 1214 aa15.68■□□□□ 0.1
LMNA-220ENST00000504687 ZNF622Q969S3 477 aaKnown RBP eCLIP15.68■□□□□ 0.12e-8■■□□□ 13
LMNA-220ENST00000504687 TCEANC2Q96MN5 208 aa15.68■□□□□ 0.1
LMNA-220ENST00000504687 MKRN1Q9UHC7 482 aaKnown RBP15.68■□□□□ 0.1
LMNA-220ENST00000504687 BAZ2AQ9UIF9 1905 aaKnown RBP15.68■□□□□ 0.1
LMNA-220ENST00000504687 GPR75-ASB3A0A0A6YYF3 556 aa15.67■□□□□ 0.1
LMNA-220ENST00000504687 PLCG2P16885 1265 aa15.67■□□□□ 0.1
LMNA-220ENST00000504687 LIFRP42702 1097 aa15.67■□□□□ 0.1
LMNA-220ENST00000504687 RCAN1P53805 252 aa15.67■□□□□ 0.1
LMNA-220ENST00000504687 NBR1Q14596 966 aa15.67■□□□□ 0.1
LMNA-220ENST00000504687 SUPT20HQ8NEM7 779 aa15.67■□□□□ 0.1
LMNA-220ENST00000504687 MRIQ9BWK5 157 aa15.67■□□□□ 0.1
LMNA-220ENST00000504687 VPS33BQ9H267 617 aa15.67■□□□□ 0.1
LMNA-220ENST00000504687 ARPP21Q9UBL0 812 aaPredicted RBP15.67■□□□□ 0.1
LMNA-220ENST00000504687 ANGEL1Q9UNK9 670 aaKnown RBP15.67■□□□□ 0.1
LMNA-220ENST00000504687 NAV1Q8NEY1 1877 aa15.67■□□□□ 0.1
LMNA-220ENST00000504687 ROBO3Q96MS0 1386 aa15.66■□□□□ 0.1
LMNA-220ENST00000504687 BAG4O95429 457 aaKnown RBP15.66■□□□□ 0.1
LMNA-220ENST00000504687 GJB2P29033 226 aa15.66■□□□□ 0.1
LMNA-220ENST00000504687 PDIA3P30101 505 aaKnown RBP15.66■□□□□ 0.1
LMNA-220ENST00000504687 DYNLL1P63167 89 aaKnown RBP15.66■□□□□ 0.1
LMNA-220ENST00000504687 FGD1P98174 961 aa15.66■□□□□ 0.1
LMNA-220ENST00000504687 MFSD6Q6ZSS7 791 aa15.66■□□□□ 0.1
LMNA-220ENST00000504687 GPR101Q96P66 508 aaPredicted RBP15.66■□□□□ 0.1
LMNA-220ENST00000504687 DCP1AQ9NPI6 582 aaPredicted RBP15.66■□□□□ 0.1
LMNA-220ENST00000504687 BRCA1P38398 1863 aaKnown RBP15.65■□□□□ 0.1
LMNA-220ENST00000504687 SH2B2O14492 632 aaPredicted RBP15.65■□□□□ 0.1
LMNA-220ENST00000504687 STX6O43752 255 aa15.65■□□□□ 0.1
LMNA-220ENST00000504687 ORC4O43929 436 aa15.65■□□□□ 0.1
LMNA-220ENST00000504687 DHX16O60231 1041 aaKnown RBP15.65■□□□□ 0.1
LMNA-220ENST00000504687 ZBTB7AO95365 584 aa15.65■□□□□ 0.1
LMNA-220ENST00000504687 HMGN5P82970 282 aaKnown RBP15.65■□□□□ 0.1
LMNA-220ENST00000504687 PKP1Q13835 747 aa15.65■□□□□ 0.1
LMNA-220ENST00000504687 MFSD14BQ5SR56 506 aa15.65■□□□□ 0.1
LMNA-220ENST00000504687 TMTC2Q8N394 836 aa15.65■□□□□ 0.1
LMNA-220ENST00000504687 NECAB1Q8N987 351 aa15.65■□□□□ 0.1
LMNA-220ENST00000504687 IGDCC4Q8TDY8 1250 aa15.65■□□□□ 0.1
LMNA-220ENST00000504687 SDR42E1Q8WUS8 393 aa15.65■□□□□ 0.1
LMNA-220ENST00000504687 LARP6Q9BRS8 491 aaKnown RBP15.65■□□□□ 0.1
LMNA-220ENST00000504687 NEDD4P46934 1319 aa15.65■□□□□ 0.1
LMNA-220ENST00000504687 GOLGA6L22H0YM25 854 aa15.64■□□□□ 0.09
LMNA-220ENST00000504687 ZSCAN22P10073 491 aaPredicted RBP15.64■□□□□ 0.09
LMNA-220ENST00000504687 SYT1P21579 422 aa15.64■□□□□ 0.09
LMNA-220ENST00000504687 TGFB2P61812 414 aa15.64■□□□□ 0.09
LMNA-220ENST00000504687 APOBRQ0VD83 1088 aa15.64■□□□□ 0.09
LMNA-220ENST00000504687 SCRN1Q12765 414 aa15.64■□□□□ 0.09
LMNA-220ENST00000504687 CTR9Q6PD62 1173 aa15.64■□□□□ 0.09
LMNA-220ENST00000504687 CYB5R4Q7L1T6 521 aa15.64■□□□□ 0.09
LMNA-220ENST00000504687 NOL10Q9BSC4 688 aaKnown RBP15.64■□□□□ 0.09
LMNA-220ENST00000504687 AATFQ9NY61 560 aaKnown RBP eCLIP15.64■□□□□ 0.09
LMNA-220ENST00000504687 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
LMNA-220ENST00000504687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms