RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 IRS2Q9Y4H2 1338 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 A0A0G2JLW4 131 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 CCDC196A0A1B0GTZ2 297 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 SYCE3A1L190 88 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 BBOX1O75936 387 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 CAVIN2O95810 425 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 FGRP09769 529 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.57
COL1A1-210ENST00000504289 GYG1P46976 350 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 TDO2P48775 406 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 ST5P78524 1137 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 APOA5Q6Q788 366 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 KRT27Q7Z3Y8 459 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 TTC6Q86TZ1 520 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 FBXO18Q8NFZ0 1043 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 WDR66Q8TBY9 1149 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 LEO1Q8WVC0 666 aaPredicted RBP11.46□□□□□ -0.57
COL1A1-210ENST00000504289 WASF1Q92558 559 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 CHAMP1Q96JM3 812 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 RIOK1Q9BRS2 568 aaKnown RBP11.46□□□□□ -0.57
COL1A1-210ENST00000504289 GDPD2Q9HCC8 539 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 RBM27Q9P2N5 1060 aaKnown RBP11.46□□□□□ -0.57
COL1A1-210ENST00000504289 UBR3Q6ZT12 1888 aa11.46□□□□□ -0.58
COL1A1-210ENST00000504289 CACNA1SQ13698 1873 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.45□□□□□ -0.58
COL1A1-210ENST00000504289 ERICH2A1L162 156 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 KLRG2A4D1S0 409 aaPredicted RBP11.45□□□□□ -0.58
COL1A1-210ENST00000504289 SNAP23O00161 211 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 NPHP1O15259 732 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 ZBTB43O43298 467 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 FDPSP14324 419 aaKnown RBP11.45□□□□□ -0.58
COL1A1-210ENST00000504289 METAP2P50579 478 aaKnown RBP eCLIP11.45□□□□□ -0.58
COL1A1-210ENST00000504289 KCNQ4P56696 695 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 CCT2P78371 535 aaKnown RBP11.45□□□□□ -0.58
COL1A1-210ENST00000504289 TMEM67Q5HYA8 995 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 FERMT3Q86UX7 667 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 LCORLQ8N3X6 602 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 FLAD1Q8NFF5 587 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 ESR2Q92731 530 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 DDX11Q96FC9 970 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 C8orf76Q96K31 380 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 LY9Q9HBG7 655 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 ATP8A2Q9NTI2 1148 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 ORC3Q9UBD5 711 aaPredicted RBP11.45□□□□□ -0.58
COL1A1-210ENST00000504289 CHD4Q14839 1912 aa11.45□□□□□ -0.58
COL1A1-210ENST00000504289 B4E1Z4 1266 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 IFIT3O14879 490 aaKnown RBP11.44□□□□□ -0.58
COL1A1-210ENST00000504289 PLSCR1O15162 318 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 CTAGE5O15320 804 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 SLC3A2P08195 630 aaKnown RBP11.44□□□□□ -0.58
COL1A1-210ENST00000504289 GYS1P13807 737 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 ATP2B4P23634 1241 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 GSTO1P78417 241 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 PPARAQ07869 468 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 FOXD4L6Q3SYB3 417 aaPredicted RBP11.44□□□□□ -0.58
COL1A1-210ENST00000504289 SBK1Q52WX2 424 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 PRR5LQ6MZQ0 368 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 FOXD4L3Q6VB84 417 aaPredicted RBP11.44□□□□□ -0.58
COL1A1-210ENST00000504289 CYB5R4Q7L1T6 521 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 CHST3Q7LGC8 479 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 ZNF804AQ7Z570 1209 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 NSUN4Q96CB9 384 aaKnown RBP11.44□□□□□ -0.58
COL1A1-210ENST00000504289 RBM17Q96I25 401 aaKnown RBP11.44□□□□□ -0.58
COL1A1-210ENST00000504289 PDLIM2Q96JY6 352 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 CRAMP1Q96RY5 1269 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 PANK2Q9BZ23 570 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 CRNKL1Q9BZJ0 848 aaKnown RBP11.44□□□□□ -0.58
COL1A1-210ENST00000504289 RBSNQ9H1K0 784 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 NCOA5Q9HCD5 579 aaKnown RBP11.44□□□□□ -0.58
COL1A1-210ENST00000504289 LRRC4BQ9NT99 713 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 PODXL2Q9NZ53 605 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 RTEL1Q9NZ71 1219 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 ZSWIM5Q9P217 1185 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 ABCF2Q9UG63 623 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 NAP1L2Q9ULW6 460 aaPredicted RBP11.44□□□□□ -0.58
COL1A1-210ENST00000504289 MAST2Q6P0Q8 1798 aa11.44□□□□□ -0.58
COL1A1-210ENST00000504289 KIAA1551Q9HCM1 1747 aa11.43□□□□□ -0.58
COL1A1-210ENST00000504289 NEDD4P46934 1319 aa11.43□□□□□ -0.58
COL1A1-210ENST00000504289 CCDC69A6NI79 296 aa11.43□□□□□ -0.58
COL1A1-210ENST00000504289 ORC4O43929 436 aa11.43□□□□□ -0.58
COL1A1-210ENST00000504289 YEATS4O95619 227 aa11.43□□□□□ -0.58
COL1A1-210ENST00000504289 LDHCP07864 332 aa11.43□□□□□ -0.58
COL1A1-210ENST00000504289 IFNAR1P17181 557 aa11.43□□□□□ -0.58
COL1A1-210ENST00000504289 RXRBP28702 533 aa11.43□□□□□ -0.58
COL1A1-210ENST00000504289 ADD1P35611 737 aaKnown RBP11.43□□□□□ -0.58
COL1A1-210ENST00000504289 RBM43Q6ZSC3 357 aaKnown RBP11.43□□□□□ -0.58
COL1A1-210ENST00000504289 TDRD7Q8NHU6 1098 aaKnown RBP11.43□□□□□ -0.58
COL1A1-210ENST00000504289 RPGRQ92834 1020 aaKnown RBP11.43□□□□□ -0.58
COL1A1-210ENST00000504289 TRIM44Q96DX7 344 aaPredicted RBP11.43□□□□□ -0.58
COL1A1-210ENST00000504289 POLR3EQ9NVU0 708 aa11.43□□□□□ -0.58
COL1A1-210ENST00000504289 SLC12A7Q9Y666 1083 aa11.43□□□□□ -0.58
COL1A1-210ENST00000504289 COL1A1P02452 1464 aaPredicted RBP11.43□□□□□ -0.58
COL1A1-210ENST00000504289 COL4A1P02462 1669 aa11.43□□□□□ -0.58
COL1A1-210ENST00000504289 A0A1W2PQ27 194 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 A0A1W2PQ64 194 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 A0A1W2PQD8 194 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 KDM4AO75164 1064 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 SERPINB2P05120 415 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 CCDC192P0DO97 292 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 CALM1P0DP23 149 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms