RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 BAG3O95817 575 aa22.03■■□□□ 1.12
DDR1-252ENST00000504152 LRRFIP1Q32MZ4 808 aaKnown RBP22.03■■□□□ 1.12
DDR1-252ENST00000504152 APOBEC3FQ8IUX4 373 aaKnown RBP22.03■■□□□ 1.12
DDR1-252ENST00000504152 USP40Q9NVE5 1235 aa22.03■■□□□ 1.12
DDR1-252ENST00000504152 TMOD2Q9NZR1 351 aa22.03■■□□□ 1.12
DDR1-252ENST00000504152 ADAMTSL1Q8N6G6 1762 aa22.02■■□□□ 1.12
DDR1-252ENST00000504152 CLRN2A0PK11 232 aa22.02■■□□□ 1.12
DDR1-252ENST00000504152 SPDYE2Q495Y8 402 aa22.02■■□□□ 1.12
DDR1-252ENST00000504152 KRT26Q7Z3Y9 468 aa22.02■■□□□ 1.12
DDR1-252ENST00000504152 USP48Q86UV5 1035 aa22.02■■□□□ 1.12
DDR1-252ENST00000504152 KBTBD3Q8NAB2 608 aa22.02■■□□□ 1.12
DDR1-252ENST00000504152 EVI5LQ96CN4 794 aa22.02■■□□□ 1.12
DDR1-252ENST00000504152 VEZTQ9HBM0 779 aa22.02■■□□□ 1.12
DDR1-252ENST00000504152 TRIM6-TRIM34B2RNG4 842 aa22.01■■□□□ 1.11
DDR1-252ENST00000504152 BTDP43251 543 aa22.01■■□□□ 1.11
DDR1-252ENST00000504152 CDC42EP5Q6NZY7 148 aa22.01■■□□□ 1.11
DDR1-252ENST00000504152 DNAJC5GQ8N7S2 189 aa22.01■■□□□ 1.11
DDR1-252ENST00000504152 ITGBL1O95965 494 aaPredicted RBP22■■□□□ 1.11
DDR1-252ENST00000504152 PDE6AP16499 860 aa22■■□□□ 1.11
DDR1-252ENST00000504152 TNNI2P48788 182 aa22■■□□□ 1.11
DDR1-252ENST00000504152 PPP4CP60510 307 aa22■■□□□ 1.11
DDR1-252ENST00000504152 TNFAIP1Q13829 316 aa22■■□□□ 1.11
DDR1-252ENST00000504152 GLIS2Q9BZE0 524 aaPredicted RBP22■■□□□ 1.11
DDR1-252ENST00000504152 DOCK2Q92608 1830 aa21.99■■□□□ 1.11
DDR1-252ENST00000504152 ZFYP08048 801 aaPredicted RBP21.99■■□□□ 1.11
DDR1-252ENST00000504152 PLCG2P16885 1265 aa21.99■■□□□ 1.11
DDR1-252ENST00000504152 ADD2P35612 726 aa21.99■■□□□ 1.11
DDR1-252ENST00000504152 FKBP1CQ5VVH2 108 aa21.99■■□□□ 1.11
DDR1-252ENST00000504152 CERS3Q8IU89 383 aa21.99■■□□□ 1.11
DDR1-252ENST00000504152 ZNF532Q9HCE3 1301 aa21.99■■□□□ 1.11
DDR1-252ENST00000504152 ECM29Q5VYK3 1845 aa21.99■■□□□ 1.11
DDR1-252ENST00000504152 TCP10L2B9ZVM9 353 aa21.98■■□□□ 1.11
DDR1-252ENST00000504152 UBE3CQ15386 1083 aa21.98■■□□□ 1.11
DDR1-252ENST00000504152 RILPL2Q969X0 211 aa21.98■■□□□ 1.11
DDR1-252ENST00000504152 FSD1Q9BTV5 496 aa21.98■■□□□ 1.11
DDR1-252ENST00000504152 DEFB129Q9H1M3 183 aa21.98■■□□□ 1.11
DDR1-252ENST00000504152 AATFQ9NY61 560 aaKnown RBP eCLIP21.98■■□□□ 1.11
DDR1-252ENST00000504152 TCRBV5S4A2TA0A5A2 114 aa21.97■■□□□ 1.11
DDR1-252ENST00000504152 RNF113AO15541 343 aaKnown RBP21.97■■□□□ 1.11
DDR1-252ENST00000504152 ADGRA1Q86SQ6 560 aa21.97■■□□□ 1.11
DDR1-252ENST00000504152 TICAM2Q86XR7 235 aa21.97■■□□□ 1.11
DDR1-252ENST00000504152 SCAF8Q9UPN6 1271 aaKnown RBP21.97■■□□□ 1.11
DDR1-252ENST00000504152 MAGEB6P1A0A0J9YX57 407 aa21.96■■□□□ 1.11
DDR1-252ENST00000504152 ADM5C9JUS6 153 aa21.96■■□□□ 1.11
DDR1-252ENST00000504152 CACNB3P54284 484 aa21.96■■□□□ 1.11
DDR1-252ENST00000504152 RASA3Q14644 834 aa21.96■■□□□ 1.11
DDR1-252ENST00000504152 FAM83AQ86UY5 434 aa21.96■■□□□ 1.11
DDR1-252ENST00000504152 PPP2R3BQ9Y5P8 575 aa21.96■■□□□ 1.11
DDR1-252ENST00000504152 MAST2Q6P0Q8 1798 aa21.95■■□□□ 1.1
DDR1-252ENST00000504152 TRAF5O00463 557 aa21.95■■□□□ 1.1
DDR1-252ENST00000504152 RHBDL3P58872 404 aa21.95■■□□□ 1.1
DDR1-252ENST00000504152 TTC22Q5TAA0 569 aa21.95■■□□□ 1.1
DDR1-252ENST00000504152 MIGA1Q8NAN2 632 aa21.95■■□□□ 1.1
DDR1-252ENST00000504152 IDI2Q9BXS1 227 aa21.95■■□□□ 1.1
DDR1-252ENST00000504152 DYNLL1P63167 89 aaKnown RBP21.94■■□□□ 1.1
DDR1-252ENST00000504152 TEX11Q8IYF3 940 aa21.94■■□□□ 1.1
DDR1-252ENST00000504152 SH3RF3Q8TEJ3 882 aaPredicted RBP21.94■■□□□ 1.1
DDR1-252ENST00000504152 MYH7P12883 1935 aa21.93■■□□□ 1.1
DDR1-252ENST00000504152 SUPT20HL1Q3ZLR7 823 aa21.93■■□□□ 1.1
DDR1-252ENST00000504152 FAM151AQ8WW52 585 aa21.93■■□□□ 1.1
DDR1-252ENST00000504152 PASKQ96RG2 1323 aa21.93■■□□□ 1.1
DDR1-252ENST00000504152 ENTPD3O75355 529 aa21.92■■□□□ 1.1
DDR1-252ENST00000504152 NPM3O75607 178 aaKnown RBP21.92■■□□□ 1.1
DDR1-252ENST00000504152 NF2P35240 595 aa21.92■■□□□ 1.1
DDR1-252ENST00000504152 RGS3P49796 1198 aa21.92■■□□□ 1.1
DDR1-252ENST00000504152 TCP10Q12799 353 aa21.92■■□□□ 1.1
DDR1-252ENST00000504152 SLFNL1Q499Z3 407 aa21.92■■□□□ 1.1
DDR1-252ENST00000504152 PRAMEF18Q5VWM3 479 aa21.92■■□□□ 1.1
DDR1-252ENST00000504152 DLK2Q6UY11 383 aa21.92■■□□□ 1.1
DDR1-252ENST00000504152 APPBP2Q92624 585 aa21.92■■□□□ 1.1
DDR1-252ENST00000504152 CDCA5Q96FF9 252 aa21.92■■□□□ 1.1
DDR1-252ENST00000504152 WDHD1O75717 1129 aaPredicted RBP21.91■■□□□ 1.1
DDR1-252ENST00000504152 FMR1Q06787 632 aaKnown RBP eCLIP21.91■■□□□ 1.1
DDR1-252ENST00000504152 NFIAQ12857 509 aa21.91■■□□□ 1.1
DDR1-252ENST00000504152 TGFBRAP1Q8WUH2 860 aa21.91■■□□□ 1.1
DDR1-252ENST00000504152 AIDAQ96BJ3 306 aa21.91■■□□□ 1.1
DDR1-252ENST00000504152 RIOK1Q9BRS2 568 aaKnown RBP21.91■■□□□ 1.1
DDR1-252ENST00000504152 ZNF408Q9H9D4 720 aa21.91■■□□□ 1.1
DDR1-252ENST00000504152 FAM198AQ9UFP1 575 aa21.91■■□□□ 1.1
DDR1-252ENST00000504152 CELF2O95319 508 aaKnown RBP21.9■■□□□ 1.1
DDR1-252ENST00000504152 CHGBP05060 677 aa21.9■■□□□ 1.1
DDR1-252ENST00000504152 USP5P45974 858 aa21.9■■□□□ 1.1
DDR1-252ENST00000504152 PICALMQ13492 652 aa21.9■■□□□ 1.1
DDR1-252ENST00000504152 CRNKL1Q9BZJ0 848 aaKnown RBP21.9■■□□□ 1.1
DDR1-252ENST00000504152 TMEM39BQ9GZU3 492 aa21.9■■□□□ 1.1
DDR1-252ENST00000504152 PUS7LQ9H0K6 701 aaKnown RBP21.9■■□□□ 1.1
DDR1-252ENST00000504152 CNTNAP1P78357 1384 aa21.89■■□□□ 1.1
DDR1-252ENST00000504152 HIP1O00291 1037 aa21.89■■□□□ 1.09
DDR1-252ENST00000504152 GSPT1P15170 499 aaKnown RBP21.89■■□□□ 1.09
DDR1-252ENST00000504152 SDSP20132 328 aa21.89■■□□□ 1.09
DDR1-252ENST00000504152 SKAP1Q86WV1 359 aa21.89■■□□□ 1.09
DDR1-252ENST00000504152 HOOK2Q96ED9 719 aa21.89■■□□□ 1.09
DDR1-252ENST00000504152 ARMT1Q9H993 441 aa21.89■■□□□ 1.09
DDR1-252ENST00000504152 TMEM88BA6NKF7 163 aa21.88■■□□□ 1.09
DDR1-252ENST00000504152 MBD4O95243 580 aa21.88■■□□□ 1.09
DDR1-252ENST00000504152 HTRA3P83110 453 aa21.88■■□□□ 1.09
DDR1-252ENST00000504152 ZMYM1Q5SVZ6 1142 aa21.88■■□□□ 1.09
DDR1-252ENST00000504152 NBPF12Q5TAG4 269 aaPredicted RBP21.88■■□□□ 1.09
DDR1-252ENST00000504152 CST9Q5W186 159 aa21.88■■□□□ 1.09
DDR1-252ENST00000504152 ZSCAN29Q8IWY8 852 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms