RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 MIGA1Q8NAN2 632 aa17.96■□□□□ 0.47
SGCA-204ENST00000504073 FAM163AQ96GL9 167 aaPredicted RBP17.96■□□□□ 0.47
SGCA-204ENST00000504073 IL25Q9H293 177 aa17.96■□□□□ 0.47
SGCA-204ENST00000504073 ARMT1Q9H993 441 aa17.96■□□□□ 0.47
SGCA-204ENST00000504073 NFKBIEO00221 500 aa17.95■□□□□ 0.46
SGCA-204ENST00000504073 TDO2P48775 406 aa17.95■□□□□ 0.46
SGCA-204ENST00000504073 PPP4CP60510 307 aa17.95■□□□□ 0.46
SGCA-204ENST00000504073 ALX1Q15699 326 aa17.95■□□□□ 0.46
SGCA-204ENST00000504073 DACT2Q5SW24 774 aa17.95■□□□□ 0.46
SGCA-204ENST00000504073 CREB3L3Q68CJ9 461 aa17.95■□□□□ 0.46
SGCA-204ENST00000504073 CIAPIN1Q6FI81 312 aa17.95■□□□□ 0.46
SGCA-204ENST00000504073 HHIPL2Q6UWX4 724 aa17.95■□□□□ 0.46
SGCA-204ENST00000504073 LMNB1P20700 586 aa17.94■□□□□ 0.46
SGCA-204ENST00000504073 NECTIN1Q15223 517 aa17.94■□□□□ 0.46
SGCA-204ENST00000504073 RSBN1LQ6PCB5 846 aaPredicted RBP17.94■□□□□ 0.46
SGCA-204ENST00000504073 AGBL3Q8NEM8 1001 aa17.94■□□□□ 0.46
SGCA-204ENST00000504073 RBM46Q8TBY0 533 aaKnown RBP17.94■□□□□ 0.46
SGCA-204ENST00000504073 ATP8A2Q9NTI2 1148 aa17.94■□□□□ 0.46
SGCA-204ENST00000504073 AATFQ9NY61 560 aaKnown RBP eCLIP17.94■□□□□ 0.46
SGCA-204ENST00000504073 MYH2Q9UKX2 1941 aa17.94■□□□□ 0.46
SGCA-204ENST00000504073 GPR75-ASB3A0A0A6YYF3 556 aa17.93■□□□□ 0.46
SGCA-204ENST00000504073 F8W031 263 aaPredicted RBP17.93■□□□□ 0.46
SGCA-204ENST00000504073 ZNF213O14771 459 aa17.93■□□□□ 0.46
SGCA-204ENST00000504073 SLC27A2O14975 620 aa17.93■□□□□ 0.46
SGCA-204ENST00000504073 SLC34A2O95436 690 aa17.93■□□□□ 0.46
SGCA-204ENST00000504073 CHGBP05060 677 aa17.93■□□□□ 0.46
SGCA-204ENST00000504073 SLC3A2P08195 630 aaKnown RBP17.93■□□□□ 0.46
SGCA-204ENST00000504073 HMGB1P09429 215 aaKnown RBP17.93■□□□□ 0.46
SGCA-204ENST00000504073 USP5P45974 858 aa17.93■□□□□ 0.46
SGCA-204ENST00000504073 SLFNL1Q499Z3 407 aa17.93■□□□□ 0.46
SGCA-204ENST00000504073 LCORLQ8N3X6 602 aa17.93■□□□□ 0.46
SGCA-204ENST00000504073 RIOK1Q9BRS2 568 aaKnown RBP17.93■□□□□ 0.46
SGCA-204ENST00000504073 GAKO14976 1311 aa17.93■□□□□ 0.46
SGCA-204ENST00000504073 PSME4Q14997 1843 aa17.93■□□□□ 0.46
SGCA-204ENST00000504073 VIL1P09327 827 aaKnown RBP17.92■□□□□ 0.46
SGCA-204ENST00000504073 RPS12P25398 132 aaKnown RBP17.92■□□□□ 0.46
SGCA-204ENST00000504073 BTDP43251 543 aa17.92■□□□□ 0.46
SGCA-204ENST00000504073 RBM5P52756 815 aaKnown RBP eCLIP17.92■□□□□ 0.46
SGCA-204ENST00000504073 TRDNQ13061 729 aa17.92■□□□□ 0.46
SGCA-204ENST00000504073 DIXDC1Q155Q3 683 aa17.92■□□□□ 0.46
SGCA-204ENST00000504073 KIAA0825Q8IV33 1275 aa17.92■□□□□ 0.46
SGCA-204ENST00000504073 IFNL3Q8IZI9 196 aa17.92■□□□□ 0.46
SGCA-204ENST00000504073 KCNB2Q92953 911 aa17.92■□□□□ 0.46
SGCA-204ENST00000504073 IL17RAQ96F46 866 aa17.92■□□□□ 0.46
SGCA-204ENST00000504073 TM6SF1Q9BZW5 370 aa17.92■□□□□ 0.46
SGCA-204ENST00000504073 SERPINA10Q9UK55 444 aa17.92■□□□□ 0.46
SGCA-204ENST00000504073 YDJCA8MPS7 323 aa17.91■□□□□ 0.46
SGCA-204ENST00000504073 RAD17O75943 681 aa17.91■□□□□ 0.46
SGCA-204ENST00000504073 FGAP02671 866 aa17.91■□□□□ 0.46
SGCA-204ENST00000504073 MCM2P49736 904 aa17.91■□□□□ 0.46
SGCA-204ENST00000504073 TSGA10IPQ3SY00 556 aa17.91■□□□□ 0.46
SGCA-204ENST00000504073 VPS53Q5VIR6 699 aa17.91■□□□□ 0.46
SGCA-204ENST00000504073 HSCBQ8IWL3 235 aa17.91■□□□□ 0.46
SGCA-204ENST00000504073 RNF41Q9H4P4 317 aaPredicted RBP17.91■□□□□ 0.46
SGCA-204ENST00000504073 PSMD14O00487 310 aa17.9■□□□□ 0.46
SGCA-204ENST00000504073 PCP11498 1178 aaKnown RBP17.9■□□□□ 0.46
SGCA-204ENST00000504073 CRKP46108 304 aa17.9■□□□□ 0.46
SGCA-204ENST00000504073 NT5C2P49902 561 aa17.9■□□□□ 0.46
SGCA-204ENST00000504073 RASSF7Q02833 373 aa17.9■□□□□ 0.46
SGCA-204ENST00000504073 RALYLQ86SE5 291 aaKnown RBP17.9■□□□□ 0.46
SGCA-204ENST00000504073 ADGRA1Q86SQ6 560 aa17.9■□□□□ 0.46
SGCA-204ENST00000504073 TEX11Q8IYF3 940 aa17.9■□□□□ 0.46
SGCA-204ENST00000504073 CERS5Q8N5B7 392 aa17.9■□□□□ 0.46
SGCA-204ENST00000504073 TMOD2Q9NZR1 351 aa17.9■□□□□ 0.46
SGCA-204ENST00000504073 ARPP21Q9UBL0 812 aaPredicted RBP17.9■□□□□ 0.46
SGCA-204ENST00000504073 SNX14Q9Y5W7 946 aa17.9■□□□□ 0.46
SGCA-204ENST00000504073 CYP46A1Q9Y6A2 500 aa17.9■□□□□ 0.46
SGCA-204ENST00000504073 GSG1L2A8MUP6 293 aa17.89■□□□□ 0.45
SGCA-204ENST00000504073 DYNLL1P63167 89 aaKnown RBP17.89■□□□□ 0.45
SGCA-204ENST00000504073 BLOC1S2Q6QNY1 142 aa17.89■□□□□ 0.45
SGCA-204ENST00000504073 ZNF384Q8TF68 577 aa17.89■□□□□ 0.45
SGCA-204ENST00000504073 ZDHHC15Q96MV8 337 aa17.89■□□□□ 0.45
SGCA-204ENST00000504073 JAKMIP1Q96N16 626 aaKnown RBP17.89■□□□□ 0.45
SGCA-204ENST00000504073 DAGLAQ9Y4D2 1042 aa17.89■□□□□ 0.45
SGCA-204ENST00000504073 SCN9AQ15858 1988 aa17.89■□□□□ 0.45
SGCA-204ENST00000504073 MYO1BO43795 1136 aa17.88■□□□□ 0.45
SGCA-204ENST00000504073 USP17L8P0C7I0 530 aa17.88■□□□□ 0.45
SGCA-204ENST00000504073 CXCL9Q07325 125 aa17.88■□□□□ 0.45
SGCA-204ENST00000504073 FSTL1Q12841 308 aa17.88■□□□□ 0.45
SGCA-204ENST00000504073 NEK1Q96PY6 1258 aa17.88■□□□□ 0.45
SGCA-204ENST00000504073 CNNM2Q9H8M5 875 aa17.88■□□□□ 0.45
SGCA-204ENST00000504073 ZNF287Q9HBT7 754 aa17.88■□□□□ 0.45
SGCA-204ENST00000504073 FZD9O00144 591 aa17.87■□□□□ 0.45
SGCA-204ENST00000504073 CYP21A2P08686 494 aa17.87■□□□□ 0.45
SGCA-204ENST00000504073 HSPA1AP0DMV8 641 aaKnown RBP17.87■□□□□ 0.45
SGCA-204ENST00000504073 HSPA1BP0DMV9 641 aaKnown RBP17.87■□□□□ 0.45
SGCA-204ENST00000504073 CASTP20810 708 aaKnown RBP17.87■□□□□ 0.45
SGCA-204ENST00000504073 SCNN1DP51172 638 aa17.87■□□□□ 0.45
SGCA-204ENST00000504073 NEK4P51957 841 aa17.87■□□□□ 0.45
SGCA-204ENST00000504073 ANKRD1Q15327 319 aa17.87■□□□□ 0.45
SGCA-204ENST00000504073 GRIK5Q16478 980 aa17.87■□□□□ 0.45
SGCA-204ENST00000504073 NCOA7Q8NI08 942 aa17.87■□□□□ 0.45
SGCA-204ENST00000504073 SDR42E1Q8WUS8 393 aa17.87■□□□□ 0.45
SGCA-204ENST00000504073 SNX21Q969T3 373 aa17.87■□□□□ 0.45
SGCA-204ENST00000504073 KCNQ5Q9NR82 932 aa17.87■□□□□ 0.45
SGCA-204ENST00000504073 PALD1Q9ULE6 856 aa17.87■□□□□ 0.45
SGCA-204ENST00000504073 FGD1P98174 961 aa17.86■□□□□ 0.45
SGCA-204ENST00000504073 DLGAP5Q15398 846 aa17.86■□□□□ 0.45
SGCA-204ENST00000504073 SH3RF3Q8TEJ3 882 aaPredicted RBP17.86■□□□□ 0.45
SGCA-204ENST00000504073 IPO9Q96P70 1041 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms