RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 TEX13AQ9BXU3 409 aaPredicted RBP17.3■□□□□ 0.36
SNF8-203ENST00000504000 CUTAO60888 179 aa17.29■□□□□ 0.36
SNF8-203ENST00000504000 H2AFXP16104 143 aaPredicted RBP17.29■□□□□ 0.36
SNF8-203ENST00000504000 METAP2P50579 478 aaKnown RBP eCLIP17.29■□□□□ 0.36
SNF8-203ENST00000504000 ALX1Q15699 326 aa17.29■□□□□ 0.36
SNF8-203ENST00000504000 NOL10Q9BSC4 688 aaKnown RBP17.29■□□□□ 0.36
SNF8-203ENST00000504000 RIPOR2Q9Y4F9 1068 aa17.29■□□□□ 0.36
SNF8-203ENST00000504000 MROH7-TTC4A0A0A0MT08 1334 aa17.29■□□□□ 0.36
SNF8-203ENST00000504000 TAF3Q5VWG9 929 aa17.29■□□□□ 0.36
SNF8-203ENST00000504000 KRT40Q6A162 431 aa17.29■□□□□ 0.36
SNF8-203ENST00000504000 FBXO38Q6PIJ6 1188 aa17.29■□□□□ 0.36
SNF8-203ENST00000504000 SHC4Q6S5L8 630 aa17.29■□□□□ 0.36
SNF8-203ENST00000504000 NBPF3Q9H094 633 aa17.29■□□□□ 0.36
SNF8-203ENST00000504000 RIC1Q4ADV7 1423 aa17.29■□□□□ 0.36
SNF8-203ENST00000504000 NID2Q14112 1375 aa17.28■□□□□ 0.36
SNF8-203ENST00000504000 LIFRP42702 1097 aa17.28■□□□□ 0.36
SNF8-203ENST00000504000 ELF2Q15723 593 aa17.28■□□□□ 0.36
SNF8-203ENST00000504000 APOA5Q6Q788 366 aa17.28■□□□□ 0.36
SNF8-203ENST00000504000 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
SNF8-203ENST00000504000 CABLES1Q8TDN4 633 aa17.28■□□□□ 0.36
SNF8-203ENST00000504000 ZHX1Q9UKY1 873 aaPredicted RBP17.28■□□□□ 0.36
SNF8-203ENST00000504000 AKAP11Q9UKA4 1901 aa17.28■□□□□ 0.36
SNF8-203ENST00000504000 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.36
SNF8-203ENST00000504000 BIN1O00499 593 aa17.27■□□□□ 0.36
SNF8-203ENST00000504000 UBASH3AP57075 661 aa17.27■□□□□ 0.36
SNF8-203ENST00000504000 NTRK3Q16288 839 aa17.27■□□□□ 0.36
SNF8-203ENST00000504000 TAF7LQ5H9L4 462 aa17.27■□□□□ 0.36
SNF8-203ENST00000504000 VSTM4Q8IW00 320 aa17.27■□□□□ 0.36
SNF8-203ENST00000504000 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.27■□□□□ 0.36
SNF8-203ENST00000504000 SLFN14P0C7P3 912 aa17.27■□□□□ 0.35
SNF8-203ENST00000504000 LMOD1P29536 600 aaPredicted RBP17.27■□□□□ 0.35
SNF8-203ENST00000504000 MCAMP43121 646 aa17.27■□□□□ 0.35
SNF8-203ENST00000504000 CCDC102BQ68D86 513 aa17.27■□□□□ 0.35
SNF8-203ENST00000504000 OLFM4Q6UX06 510 aa17.27■□□□□ 0.35
SNF8-203ENST00000504000 SYT10Q6XYQ8 523 aa17.27■□□□□ 0.35
SNF8-203ENST00000504000 IGDCC4Q8TDY8 1250 aa17.27■□□□□ 0.35
SNF8-203ENST00000504000 FBXW7Q969H0 707 aa17.27■□□□□ 0.35
SNF8-203ENST00000504000 GJB4Q9NTQ9 266 aa17.27■□□□□ 0.35
SNF8-203ENST00000504000 HOOK1Q9UJC3 728 aaKnown RBP17.27■□□□□ 0.35
SNF8-203ENST00000504000 BMS1Q14692 1282 aaKnown RBP17.26■□□□□ 0.35
SNF8-203ENST00000504000 GOLGA6L9A6NEM1 432 aa17.25■□□□□ 0.35
SNF8-203ENST00000504000 ZBTB43O43298 467 aa17.25■□□□□ 0.35
SNF8-203ENST00000504000 ZSCAN12O43309 604 aa17.25■□□□□ 0.35
SNF8-203ENST00000504000 MARCKSP29966 332 aaPredicted RBP17.25■□□□□ 0.35
SNF8-203ENST00000504000 IARSP41252 1262 aaKnown RBP17.25■□□□□ 0.35
SNF8-203ENST00000504000 TRIM29Q14134 588 aa17.25■□□□□ 0.35
SNF8-203ENST00000504000 TERF2Q15554 542 aa17.25■□□□□ 0.35
SNF8-203ENST00000504000 NT5DC1Q5TFE4 455 aa17.25■□□□□ 0.35
SNF8-203ENST00000504000 KRBA2Q6ZNG9 492 aa17.25■□□□□ 0.35
SNF8-203ENST00000504000 CYB5R4Q7L1T6 521 aa17.25■□□□□ 0.35
SNF8-203ENST00000504000 WASF1Q92558 559 aa17.25■□□□□ 0.35
SNF8-203ENST00000504000 MTA3Q9BTC8 594 aa17.25■□□□□ 0.35
SNF8-203ENST00000504000 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNF8-203ENST00000504000 ARHGAP6O43182 974 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 TPM1P09493 284 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 ATP1A3P13637 1013 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 SLC9C2Q5TAH2 1124 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 TRIM65Q6PJ69 517 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 KIF6Q6ZMV9 814 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 TBC1D10CQ8IV04 446 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 VGLL2Q8N8G2 317 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 LRP6O75581 1613 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 SERPINC1P01008 464 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 UQCRFS1P1P0C7P4 283 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 ARID4AP29374 1257 aaPredicted RBP17.24■□□□□ 0.35
SNF8-203ENST00000504000 CDC27P30260 824 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 MDM2Q00987 491 aaPredicted RBP17.24■□□□□ 0.35
SNF8-203ENST00000504000 HSP90AB3PQ58FF7 597 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 METTL24Q5JXM2 366 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 METTL16Q86W50 562 aaKnown RBP17.24■□□□□ 0.35
SNF8-203ENST00000504000 CARD10Q9BWT7 1032 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 KCNH3Q9ULD8 1083 aa17.24■□□□□ 0.35
SNF8-203ENST00000504000 IL2RBP14784 551 aa17.23■□□□□ 0.35
SNF8-203ENST00000504000 RCAN1P53805 252 aa17.23■□□□□ 0.35
SNF8-203ENST00000504000 GNL2Q13823 731 aaKnown RBP17.23■□□□□ 0.35
SNF8-203ENST00000504000 CT47A1Q5JQC4 288 aaPredicted RBP17.23■□□□□ 0.35
SNF8-203ENST00000504000 GIGYF2Q6Y7W6 1299 aaKnown RBP17.23■□□□□ 0.35
SNF8-203ENST00000504000 LDHAL6AQ6ZMR3 332 aa17.23■□□□□ 0.35
SNF8-203ENST00000504000 KRI1Q8N9T8 703 aaKnown RBP17.23■□□□□ 0.35
SNF8-203ENST00000504000 TRIML1Q8N9V2 468 aa17.23■□□□□ 0.35
SNF8-203ENST00000504000 TTLL11Q8NHH1 800 aa17.23■□□□□ 0.35
SNF8-203ENST00000504000 DDX17Q92841 729 aaKnown RBP17.23■□□□□ 0.35
SNF8-203ENST00000504000 CNNM2Q9H8M5 875 aa17.23■□□□□ 0.35
SNF8-203ENST00000504000 LY9Q9HBG7 655 aa17.23■□□□□ 0.35
SNF8-203ENST00000504000 FAM217BQ9NTX9 383 aaPredicted RBP17.23■□□□□ 0.35
SNF8-203ENST00000504000 TCRBV5S4A2TA0A5A2 114 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 ATP8B1O43520 1251 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 FMNL1O95466 1100 aaPredicted RBP17.22■□□□□ 0.35
SNF8-203ENST00000504000 TOP1P11387 765 aaKnown RBP17.22■□□□□ 0.35
SNF8-203ENST00000504000 IFNAR1P17181 557 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 TBX2Q13207 712 aaPredicted RBP17.22■□□□□ 0.35
SNF8-203ENST00000504000 CFAP100Q494V2 611 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 HOMER1Q86YM7 354 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 REXO1L1PQ8IX06 675 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 ZNF579Q8NAF0 562 aaKnown RBP17.22■□□□□ 0.35
SNF8-203ENST00000504000 CNNM3Q8NE01 707 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 FAM89AQ96GI7 184 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 MPHOSPH8Q99549 860 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 DACH1Q9UI36 760 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms