RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ZNF790Q6PG37 636 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 FAM174AQ8TBP5 190 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 CD99L2Q8TCZ2 262 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 DPF2Q92785 391 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 RBM17Q96I25 401 aaKnown RBP7.41□□□□□ -1.22
SPTA1-209ENST00000498708 ZNF333Q96JL9 665 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 CRAMP1Q96RY5 1269 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 KCNQ5Q9NR82 932 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 GGA3Q9NZ52 723 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 RAPGEFL1Q9UHV5 662 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 SCAF8Q9UPN6 1271 aaKnown RBP7.41□□□□□ -1.22
SPTA1-209ENST00000498708 ZNF652Q9Y2D9 606 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 ATP6V0A2Q9Y487 856 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 KIF7Q2M1P5 1343 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 MUC3AQ02505 3323 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 MYCP01106 439 aaPredicted RBP7.4□□□□□ -1.22
SPTA1-209ENST00000498708 KIAA2012Q0VF49 1180 aa7.4□□□□□ -1.22
SPTA1-209ENST00000498708 NFX1Q12986 1120 aaKnown RBP7.4□□□□□ -1.22
SPTA1-209ENST00000498708 PRAMEF18Q5VWM3 479 aa7.4□□□□□ -1.22
SPTA1-209ENST00000498708 Q7L0L9 218 aa7.4□□□□□ -1.22
SPTA1-209ENST00000498708 DPF3Q92784 378 aa7.4□□□□□ -1.22
SPTA1-209ENST00000498708 CLSPNQ9HAW4 1339 aa7.4□□□□□ -1.22
SPTA1-209ENST00000498708 RIC1Q4ADV7 1423 aa7.4□□□□□ -1.22
SPTA1-209ENST00000498708 SIPA1L3O60292 1781 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-209ENST00000498708 TERTO14746 1132 aaKnown RBP7.39□□□□□ -1.23
SPTA1-209ENST00000498708 PRKCSHP14314 528 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-209ENST00000498708 FKBP1BP68106 108 aa7.39□□□□□ -1.23
SPTA1-209ENST00000498708 TEFQ10587 303 aa7.39□□□□□ -1.23
SPTA1-209ENST00000498708 KIF4BQ2VIQ3 1234 aa7.39□□□□□ -1.23
SPTA1-209ENST00000498708 MYSM1Q5VVJ2 828 aa7.39□□□□□ -1.23
SPTA1-209ENST00000498708 NBPF10Q6P3W6 841 aaKnown RBP7.39□□□□□ -1.23
SPTA1-209ENST00000498708 DPP8Q6V1X1 898 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-209ENST00000498708 SUPT20HQ8NEM7 779 aa7.39□□□□□ -1.23
SPTA1-209ENST00000498708 IL17REQ8NFR9 667 aa7.39□□□□□ -1.23
SPTA1-209ENST00000498708 FMNL2Q96PY5 1086 aa7.39□□□□□ -1.23
SPTA1-209ENST00000498708 LAMB4A4D0S4 1761 aa7.38□□□□□ -1.23
SPTA1-209ENST00000498708 PRUNE2Q8WUY3 3088 aa7.38□□□□□ -1.23
SPTA1-209ENST00000498708 F12P00748 615 aaPredicted RBP7.38□□□□□ -1.23
SPTA1-209ENST00000498708 SREBF2Q12772 1141 aa7.38□□□□□ -1.23
SPTA1-209ENST00000498708 CSPP1Q1MSJ5 1256 aa7.38□□□□□ -1.23
SPTA1-209ENST00000498708 SLC4A8Q2Y0W8 1093 aa7.38□□□□□ -1.23
SPTA1-209ENST00000498708 ANGEL2Q5VTE6 544 aaKnown RBP7.38□□□□□ -1.23
SPTA1-209ENST00000498708 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.38□□□□□ -1.23
SPTA1-209ENST00000498708 DEFB123Q8N688 67 aa7.38□□□□□ -1.23
SPTA1-209ENST00000498708 ARMC2Q8NEN0 867 aa7.38□□□□□ -1.23
SPTA1-209ENST00000498708 RSPH6AQ9H0K4 717 aa7.38□□□□□ -1.23
SPTA1-209ENST00000498708 EFCC1Q9HA90 598 aa7.38□□□□□ -1.23
SPTA1-209ENST00000498708 STXBP5LQ9Y2K9 1186 aa7.38□□□□□ -1.23
SPTA1-209ENST00000498708 TAF1P21675 1872 aa7.38□□□□□ -1.23
SPTA1-209ENST00000498708 NUP98P52948 1817 aa7.38□□□□□ -1.23
SPTA1-209ENST00000498708 ZNF609O15014 1411 aa7.37□□□□□ -1.23
SPTA1-209ENST00000498708 ERBB4Q15303 1308 aa7.37□□□□□ -1.23
SPTA1-209ENST00000498708 GNAT3A8MTJ3 354 aa7.37□□□□□ -1.23
SPTA1-209ENST00000498708 SCARF1Q14162 830 aa7.37□□□□□ -1.23
SPTA1-209ENST00000498708 SUSD4Q5VX71 490 aa7.37□□□□□ -1.23
SPTA1-209ENST00000498708 SP8Q8IXZ3 490 aa7.37□□□□□ -1.23
SPTA1-209ENST00000498708 HELBQ8NG08 1087 aaPredicted RBP7.37□□□□□ -1.23
SPTA1-209ENST00000498708 NYXQ9GZU5 481 aa7.37□□□□□ -1.23
SPTA1-209ENST00000498708 TMX4Q9H1E5 349 aaPredicted RBP7.37□□□□□ -1.23
SPTA1-209ENST00000498708 DBNDD1Q9H9R9 158 aa7.37□□□□□ -1.23
SPTA1-209ENST00000498708 MAP10Q9P2G4 905 aa7.37□□□□□ -1.23
SPTA1-209ENST00000498708 KDM3BQ7LBC6 1761 aa7.37□□□□□ -1.23
SPTA1-209ENST00000498708 DUOX1Q9NRD9 1551 aa7.37□□□□□ -1.23
SPTA1-209ENST00000498708 RTL9Q8NET4 1388 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 ABCC4O15439 1325 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 UBN2Q6ZU65 1347 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 IGF2BP3O00425 579 aaKnown RBP eCLIP7.36□□□□□ -1.23
SPTA1-209ENST00000498708 PER1O15534 1290 aaPredicted RBP7.36□□□□□ -1.23
SPTA1-209ENST00000498708 WIPF1O43516 503 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 ADH1CP00326 375 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 BMP1P13497 986 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 GPTP24298 496 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 INSM1Q01101 510 aaPredicted RBP7.36□□□□□ -1.23
SPTA1-209ENST00000498708 PTPN12Q05209 780 aaKnown RBP7.36□□□□□ -1.23
SPTA1-209ENST00000498708 NNTQ13423 1086 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 BPHLQ86WA6 291 aaPredicted RBP7.36□□□□□ -1.23
SPTA1-209ENST00000498708 GAS2L2Q8NHY3 880 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 TSC1Q92574 1164 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 SHISA4Q96DD7 197 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 ERO1AQ96HE7 468 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 CDK15Q96Q40 435 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 STAP2Q9UGK3 403 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 LIMD1Q9UGP4 676 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 PTCH2Q9Y6C5 1203 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 SCN9AQ15858 1988 aa7.36□□□□□ -1.23
SPTA1-209ENST00000498708 A0A1W2PPC1 479 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 BTBD11A6QL63 1104 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 ZBTB7BO15156 539 aaPredicted RBP7.35□□□□□ -1.23
SPTA1-209ENST00000498708 LILRB3O75022 631 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 RPS12P25398 132 aaKnown RBP7.35□□□□□ -1.23
SPTA1-209ENST00000498708 PRKAR2BP31323 418 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 AGERQ15109 404 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 QPCTQ16769 361 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 SLC9C1Q4G0N8 1177 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 TRIM46Q7Z4K8 759 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 NPAS3Q8IXF0 933 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 NGEFQ8N5V2 710 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 SH3TC2Q8TF17 1288 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 PHACTR3Q96KR7 559 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 SLC24A3Q9HC58 644 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms