RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 FDPSP14324 419 aaKnown RBP19.03■□□□□ 0.64
COL6A1-206ENST00000498614 ITPK1Q13572 414 aa19.03■□□□□ 0.64
COL6A1-206ENST00000498614 ERO1AQ96HE7 468 aa19.03■□□□□ 0.64
COL6A1-206ENST00000498614 MYH7P12883 1935 aa19.02■□□□□ 0.64
COL6A1-206ENST00000498614 CDHR2Q9BYE9 1310 aa19.02■□□□□ 0.64
COL6A1-206ENST00000498614 PRC1O43663 620 aa19.02■□□□□ 0.64
COL6A1-206ENST00000498614 FBXO38Q6PIJ6 1188 aa19.02■□□□□ 0.64
COL6A1-206ENST00000498614 ZBTB1Q9Y2K1 713 aa19.02■□□□□ 0.64
COL6A1-206ENST00000498614 CTSWP56202 376 aa19.01■□□□□ 0.63
COL6A1-206ENST00000498614 OTUD7BQ6GQQ9 843 aa19.01■□□□□ 0.63
COL6A1-206ENST00000498614 ANKRD18BA2A2Z9 1011 aa19.01■□□□□ 0.63
COL6A1-206ENST00000498614 IRS4O14654 1257 aaPredicted RBP19.01■□□□□ 0.63
COL6A1-206ENST00000498614 MB21D2Q8IYB1 491 aaPredicted RBP19.01■□□□□ 0.63
COL6A1-206ENST00000498614 FMR1NBQ8N0W7 255 aaPredicted RBP19.01■□□□□ 0.63
COL6A1-206ENST00000498614 KCND1Q9NSA2 647 aa19.01■□□□□ 0.63
COL6A1-206ENST00000498614 TRMT112Q9UI30 125 aaKnown RBP19.01■□□□□ 0.63
COL6A1-206ENST00000498614 PCDHA7Q9UN72 937 aa19.01■□□□□ 0.63
COL6A1-206ENST00000498614 KLF18A0A0U1RQI7 1052 aa19■□□□□ 0.63
COL6A1-206ENST00000498614 CYP19A1P11511 503 aaPredicted RBP19■□□□□ 0.63
COL6A1-206ENST00000498614 ATL3Q6DD88 541 aa19■□□□□ 0.63
COL6A1-206ENST00000498614 SLU7O95391 586 aaKnown RBP19■□□□□ 0.63
COL6A1-206ENST00000498614 ANTXR2P58335 489 aa19■□□□□ 0.63
COL6A1-206ENST00000498614 SMIM5Q71RC9 77 aa19■□□□□ 0.63
COL6A1-206ENST00000498614 KRT222Q8N1A0 295 aa19■□□□□ 0.63
COL6A1-206ENST00000498614 OSBPL5Q9H0X9 879 aaPredicted RBP19■□□□□ 0.63
COL6A1-206ENST00000498614 AKAP11Q9UKA4 1901 aa19■□□□□ 0.63
COL6A1-206ENST00000498614 A0A1B0GVL5 298 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 GOLGA8BA8MQT2 603 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 ZNF213O14771 459 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 EVCP57679 992 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 GSDMDP57764 484 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 RALYLQ86SE5 291 aaKnown RBP18.99■□□□□ 0.63
COL6A1-206ENST00000498614 FBXL16Q8N461 479 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 NCOA7Q8NI08 942 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 MRPS27Q92552 414 aaKnown RBP18.99■□□□□ 0.63
COL6A1-206ENST00000498614 NAT10Q9H0A0 1025 aaKnown RBP18.99■□□□□ 0.63
COL6A1-206ENST00000498614 ABCC12Q96J65 1359 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 E4F1Q66K89 784 aaPredicted RBP18.99■□□□□ 0.63
COL6A1-206ENST00000498614 FAM196AQ6ZSG2 479 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 SDF4Q9BRK5 362 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.99■□□□□ 0.63
COL6A1-206ENST00000498614 FAM53CQ9NYF3 392 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 TBC1D2BQ9UPU7 963 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 MYH3P11055 1940 aa18.99■□□□□ 0.63
COL6A1-206ENST00000498614 NPHP1O15259 732 aa18.98■□□□□ 0.63
COL6A1-206ENST00000498614 NDUFA8P51970 172 aa18.98■□□□□ 0.63
COL6A1-206ENST00000498614 DPCR1Q3MIW9 517 aa18.98■□□□□ 0.63
COL6A1-206ENST00000498614 SLC9C2Q5TAH2 1124 aa18.98■□□□□ 0.63
COL6A1-206ENST00000498614 DENND2AQ9ULE3 1009 aa18.98■□□□□ 0.63
COL6A1-206ENST00000498614 HPS5Q9UPZ3 1129 aa18.98■□□□□ 0.63
COL6A1-206ENST00000498614 MYO5AQ9Y4I1 1855 aaKnown RBP18.98■□□□□ 0.63
COL6A1-206ENST00000498614 ANKRD36CQ5JPF3 1778 aa18.98■□□□□ 0.63
COL6A1-206ENST00000498614 IDH1O75874 414 aaKnown RBP18.98■□□□□ 0.63
COL6A1-206ENST00000498614 ADD2P35612 726 aa18.98■□□□□ 0.63
COL6A1-206ENST00000498614 TERF2Q15554 542 aa18.98■□□□□ 0.63
COL6A1-206ENST00000498614 VGLL2Q8N8G2 317 aa18.98■□□□□ 0.63
COL6A1-206ENST00000498614 PIH1D3Q9NQM4 214 aaKnown RBP18.98■□□□□ 0.63
COL6A1-206ENST00000498614 ARMCX5Q6P1M9 558 aa18.97■□□□□ 0.63
COL6A1-206ENST00000498614 CHMP4CQ96CF2 233 aa18.97■□□□□ 0.63
COL6A1-206ENST00000498614 XPO4Q9C0E2 1151 aaKnown RBP18.97■□□□□ 0.63
COL6A1-206ENST00000498614 PHKA1P46020 1223 aa18.97■□□□□ 0.63
COL6A1-206ENST00000498614 SMARCC1Q92922 1105 aaPredicted RBP18.97■□□□□ 0.63
COL6A1-206ENST00000498614 PPP1R13BQ96KQ4 1090 aa18.97■□□□□ 0.63
COL6A1-206ENST00000498614 GJB4Q9NTQ9 266 aa18.97■□□□□ 0.63
COL6A1-206ENST00000498614 ZNF446Q9NWS9 450 aa18.97■□□□□ 0.63
COL6A1-206ENST00000498614 RTEL1Q9NZ71 1219 aa18.97■□□□□ 0.63
COL6A1-206ENST00000498614 IFNKQ9P0W0 207 aa18.97■□□□□ 0.63
COL6A1-206ENST00000498614 IMPACTQ9P2X3 320 aa18.97■□□□□ 0.63
COL6A1-206ENST00000498614 NUP98P52948 1817 aa18.97■□□□□ 0.63
COL6A1-206ENST00000498614 PDE8BO95263 885 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 SMC2O95347 1197 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 ADALQ6DHV7 355 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 TMC6Q7Z403 805 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 LRRN4CLQ8ND94 238 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 HELBQ8NG08 1087 aaPredicted RBP18.96■□□□□ 0.63
COL6A1-206ENST00000498614 C8orf76Q96K31 380 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 NBPF3Q9H094 633 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 ORC3Q9UBD5 711 aaPredicted RBP18.96■□□□□ 0.63
COL6A1-206ENST00000498614 CLIC4Q9Y696 253 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 BTAF1O14981 1849 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 UBN2Q6ZU65 1347 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 KIF2AO00139 706 aaPredicted RBP18.96■□□□□ 0.63
COL6A1-206ENST00000498614 PDE8AO60658 829 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 APPP05067 770 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 POLR3DP05423 398 aaPredicted RBP18.96■□□□□ 0.63
COL6A1-206ENST00000498614 CRKLP46109 303 aaKnown RBP18.96■□□□□ 0.63
COL6A1-206ENST00000498614 DZIP3Q86Y13 1208 aaKnown RBP18.96■□□□□ 0.63
COL6A1-206ENST00000498614 NKX2-3Q8TAU0 364 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 KIAA1468Q9P260 1216 aa18.96■□□□□ 0.63
COL6A1-206ENST00000498614 SBF2Q86WG5 1849 aa18.96■□□□□ 0.62
COL6A1-206ENST00000498614 NEDD4P46934 1319 aa18.95■□□□□ 0.62
COL6A1-206ENST00000498614 CPLX1O14810 134 aa18.95■□□□□ 0.62
COL6A1-206ENST00000498614 CCDC102BQ68D86 513 aa18.95■□□□□ 0.62
COL6A1-206ENST00000498614 LINC00116Q8NCU8 138 aa18.95■□□□□ 0.62
COL6A1-206ENST00000498614 ST7Q9NRC1 585 aa18.95■□□□□ 0.62
COL6A1-206ENST00000498614 DDX60Q8IY21 1712 aaKnown RBP18.95■□□□□ 0.62
COL6A1-206ENST00000498614 A0A1W2PQ27 194 aa18.95■□□□□ 0.62
COL6A1-206ENST00000498614 A0A1W2PQ64 194 aa18.95■□□□□ 0.62
COL6A1-206ENST00000498614 A0A1W2PQD8 194 aa18.95■□□□□ 0.62
COL6A1-206ENST00000498614 DHX16O60231 1041 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms