RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 METTL5Q9NRN9 209 aaKnown RBP7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 ADAMTS7Q9UKP4 1686 aa7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 SCN11AQ9UI33 1791 aa7.8□□□□□ -1.16
TMEM39A-212ENST00000497993 PPFIA3O75145 1194 aa7.8□□□□□ -1.16
TMEM39A-212ENST00000497993 IGFBP4P22692 258 aa7.8□□□□□ -1.16
TMEM39A-212ENST00000497993 HOXC9P31274 260 aa7.8□□□□□ -1.16
TMEM39A-212ENST00000497993 PHKA2P46019 1235 aa7.8□□□□□ -1.16
TMEM39A-212ENST00000497993 PSMA6P60900 246 aaKnown RBP7.8□□□□□ -1.16
TMEM39A-212ENST00000497993 CCDC144BQ3MJ40 725 aa7.8□□□□□ -1.16
TMEM39A-212ENST00000497993 SDE2Q6IQ49 451 aa7.8□□□□□ -1.16
TMEM39A-212ENST00000497993 GTF3C2Q8WUA4 911 aaPredicted RBP7.8□□□□□ -1.16
TMEM39A-212ENST00000497993 DHX38Q92620 1227 aaKnown RBP7.8□□□□□ -1.16
TMEM39A-212ENST00000497993 STRN4Q9NRL3 753 aa7.8□□□□□ -1.16
TMEM39A-212ENST00000497993 USP3Q9Y6I4 520 aa7.8□□□□□ -1.16
TMEM39A-212ENST00000497993 MEGF6O75095 1541 aa7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 F11P03951 625 aa7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 P4HBP07237 508 aaKnown RBP7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 IBSPP21815 317 aaPredicted RBP7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 WEE1P30291 646 aa7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 NOS2P35228 1153 aa7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 PLA2G4AP47712 749 aa7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 EVA1CP58658 441 aa7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 ARHGAP4P98171 946 aa7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 OCLNQ16625 522 aa7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 SCG3Q8WXD2 468 aaKnown RBP7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 RNF34Q969K3 372 aa7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 GMCL1Q96IK5 515 aa7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 CAPN10Q9HC96 672 aa7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 ZDHHC3Q9NYG2 299 aa7.79□□□□□ -1.16
TMEM39A-212ENST00000497993 KIF7Q2M1P5 1343 aa7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 SERTM1A2A2V5 107 aa7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 TERTO14746 1132 aaKnown RBP7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 PPP1R12BO60237 982 aaPredicted RBP7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 RAB11FIP3O75154 756 aa7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 HIRAP54198 1017 aaPredicted RBP7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 IGBP1P78318 339 aa7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 TBCELQ5QJ74 424 aa7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 EGFLAMQ63HQ2 1017 aa7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 TOM1L2Q6ZVM7 507 aa7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 METTL16Q86W50 562 aaKnown RBP7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 ANKRD24Q8TF21 1146 aa7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 SLC16A10Q8TF71 515 aa7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 PRIMPOLQ96LW4 560 aa7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 WASHC2AQ641Q2 1341 aa7.78□□□□□ -1.16
TMEM39A-212ENST00000497993 hCG_2014768A0A024R1R8 64 aa7.77□□□□□ -1.17
TMEM39A-212ENST00000497993 H7C1W4 665 aa7.77□□□□□ -1.17
TMEM39A-212ENST00000497993 CLSTN1O94985 981 aa7.77□□□□□ -1.17
TMEM39A-212ENST00000497993 ITGA6P23229 1130 aa7.77□□□□□ -1.17
TMEM39A-212ENST00000497993 DDB1Q16531 1140 aa7.77□□□□□ -1.17
TMEM39A-212ENST00000497993 CCDC181Q5TID7 509 aa7.77□□□□□ -1.17
TMEM39A-212ENST00000497993 ZDHHC1Q8WTX9 485 aa7.77□□□□□ -1.17
TMEM39A-212ENST00000497993 GAS2L1Q99501 681 aaPredicted RBP7.77□□□□□ -1.17
TMEM39A-212ENST00000497993 C2orf49Q9BVC5 232 aaPredicted RBP7.77□□□□□ -1.17
TMEM39A-212ENST00000497993 GGNBP2Q9H3C7 697 aa7.77□□□□□ -1.17
TMEM39A-212ENST00000497993 ZNF232Q9UNY5 417 aa7.77□□□□□ -1.17
TMEM39A-212ENST00000497993 SRCAPQ6ZRS2 3230 aa7.77□□□□□ -1.17
TMEM39A-212ENST00000497993 SIPA1L3O60292 1781 aaPredicted RBP7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 C5P01031 1676 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 COL3A1P02461 1466 aaPredicted RBP7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 KDRP35968 1356 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 H3BM21 787 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 EML1O00423 815 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 PLSCR1O15162 318 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 PTCD1O75127 700 aaKnown RBP7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 IL2RBP14784 551 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 TATP17735 454 aaPredicted RBP7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 MSX1P28360 303 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 BAG6P46379 1132 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 ECM1Q16610 540 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 MARCH10Q8NA82 808 aaPredicted RBP7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 NANOS1Q8WY41 292 aaKnown RBP7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 AIDAQ96BJ3 306 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 CAMKK2Q96RR4 588 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 RBCK1Q9BYM8 510 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 DNMT3AQ9Y6K1 912 aaPredicted RBP7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 UBR3Q6ZT12 1888 aa7.76□□□□□ -1.17
TMEM39A-212ENST00000497993 COL5A3P25940 1745 aaPredicted RBP7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 SORBS3O60504 671 aa7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 ZNF76P36508 570 aa7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 PDE3BQ13370 1112 aa7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 LBRQ14739 615 aaKnown RBP7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 PTPROQ16827 1216 aa7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 LDLRAD1Q5T700 205 aa7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 C1orf53Q5VUE5 145 aa7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 TRIM22Q8IYM9 498 aa7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 PGBD3Q8N328 593 aa7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 ZCRB1Q8TBF4 217 aaKnown RBP7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 ZNF775Q96BV0 537 aaPredicted RBP7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 GMLQ99445 158 aa7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 PPME1Q9Y570 386 aa7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 GPC6Q9Y625 555 aaPredicted RBP7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 PARP3Q9Y6F1 533 aa7.75□□□□□ -1.17
TMEM39A-212ENST00000497993 UBR2Q8IWV8 1755 aa7.74□□□□□ -1.17
TMEM39A-212ENST00000497993 NDUFB5O43674 189 aa7.74□□□□□ -1.17
TMEM39A-212ENST00000497993 PRPF40AO75400 957 aaKnown RBP7.74□□□□□ -1.17
TMEM39A-212ENST00000497993 FANCCQ00597 558 aa7.74□□□□□ -1.17
TMEM39A-212ENST00000497993 RRS1Q15050 365 aaKnown RBP7.74□□□□□ -1.17
TMEM39A-212ENST00000497993 RIPOR1Q6ZS17 1223 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms