RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 FBXL18Q96ME1 805 aa8.1□□□□□ -1.11
SMC4-227ENST00000497984 C1GALT1Q9NS00 363 aa8.1□□□□□ -1.11
SMC4-227ENST00000497984 RAD18Q9NS91 495 aa8.1□□□□□ -1.11
SMC4-227ENST00000497984 TXNDC2Q86VQ3 553 aa8.09□□□□□ -1.11
SMC4-227ENST00000497984 CCDC74AQ96AQ1 378 aa8.09□□□□□ -1.11
SMC4-227ENST00000497984 CITED4Q96RK1 184 aa8.09□□□□□ -1.11
SMC4-227ENST00000497984 ZC3H7BQ9UGR2 993 aaKnown RBP8.09□□□□□ -1.11
SMC4-227ENST00000497984 PPP1R9AQ9ULJ8 1098 aa8.09□□□□□ -1.11
SMC4-227ENST00000497984 EIF1AYO14602 144 aaKnown RBP8.08□□□□□ -1.12
SMC4-227ENST00000497984 CYP27A1Q02318 531 aa8.08□□□□□ -1.12
SMC4-227ENST00000497984 DUSP27Q5VZP5 1158 aa8.08□□□□□ -1.12
SMC4-227ENST00000497984 GLIS3Q8NEA6 775 aa8.08□□□□□ -1.12
SMC4-227ENST00000497984 DNAJC25Q9H1X3 360 aa8.08□□□□□ -1.12
SMC4-227ENST00000497984 ARID1BQ8NFD5 2236 aaPredicted RBP8.08□□□□□ -1.12
SMC4-227ENST00000497984 FAAP100Q0VG06 881 aa8.07□□□□□ -1.12
SMC4-227ENST00000497984 AP3B2Q13367 1082 aa8.07□□□□□ -1.12
SMC4-227ENST00000497984 PDE3AQ14432 1141 aa8.07□□□□□ -1.12
SMC4-227ENST00000497984 RPS26P11Q5JNZ5 115 aaPredicted RBP8.07□□□□□ -1.12
SMC4-227ENST00000497984 TP53INP2Q8IXH6 220 aa8.07□□□□□ -1.12
SMC4-227ENST00000497984 PAK6Q9NQU5 681 aaPredicted RBP8.07□□□□□ -1.12
SMC4-227ENST00000497984 TMEM238LA0A1B0GVL6 79 aa8.06□□□□□ -1.12
SMC4-227ENST00000497984 TMPRSS2O15393 492 aa8.06□□□□□ -1.12
SMC4-227ENST00000497984 FZD5Q13467 585 aa8.06□□□□□ -1.12
SMC4-227ENST00000497984 WDR89Q96FK6 387 aaPredicted RBP8.06□□□□□ -1.12
SMC4-227ENST00000497984 NIF3L1Q9GZT8 377 aa8.06□□□□□ -1.12
SMC4-227ENST00000497984 LRRC4CQ9HCJ2 640 aa8.06□□□□□ -1.12
SMC4-227ENST00000497984 DAGLAQ9Y4D2 1042 aa8.06□□□□□ -1.12
SMC4-227ENST00000497984 LIG1P18858 919 aa8.05□□□□□ -1.12
SMC4-227ENST00000497984 GRM2Q14416 872 aa8.05□□□□□ -1.12
SMC4-227ENST00000497984 OGFOD3Q6PK18 319 aa8.05□□□□□ -1.12
SMC4-227ENST00000497984 WFDC3Q8IUB2 231 aa8.05□□□□□ -1.12
SMC4-227ENST00000497984 FLCNQ8NFG4 579 aa8.05□□□□□ -1.12
SMC4-227ENST00000497984 CCDC86Q9H6F5 360 aaKnown RBP8.05□□□□□ -1.12
SMC4-227ENST00000497984 GADD45BO75293 160 aaPredicted RBP8.04□□□□□ -1.12
SMC4-227ENST00000497984 ITGB5P18084 799 aa8.04□□□□□ -1.12
SMC4-227ENST00000497984 ZNF157P51786 506 aaPredicted RBP8.04□□□□□ -1.12
SMC4-227ENST00000497984 LGR6Q9HBX8 967 aa8.04□□□□□ -1.12
SMC4-227ENST00000497984 CRIM1Q9NZV1 1036 aa8.04□□□□□ -1.12
SMC4-227ENST00000497984 PCDHGC5Q9Y5F6 944 aa8.04□□□□□ -1.12
SMC4-227ENST00000497984 ZNF862O60290 1169 aa8.03□□□□□ -1.12
SMC4-227ENST00000497984 AGBL5Q8NDL9 886 aa8.03□□□□□ -1.12
SMC4-227ENST00000497984 ALKBH8Q96BT7 664 aaKnown RBP8.03□□□□□ -1.12
SMC4-227ENST00000497984 CSRNP1Q96S65 589 aa8.03□□□□□ -1.12
SMC4-227ENST00000497984 TRAK1Q9UPV9 953 aa8.03□□□□□ -1.12
SMC4-227ENST00000497984 KIF4BQ2VIQ3 1234 aa8.02□□□□□ -1.13
SMC4-227ENST00000497984 C14orf37Q86TY3 774 aa8.02□□□□□ -1.13
SMC4-227ENST00000497984 EPS8L3Q8TE67 593 aaKnown RBP8.02□□□□□ -1.13
SMC4-227ENST00000497984 BCL7CQ8WUZ0 217 aaPredicted RBP8.02□□□□□ -1.13
SMC4-227ENST00000497984 FANCD2OSQ96PS1 177 aa8.02□□□□□ -1.13
SMC4-227ENST00000497984 RBCK1Q9BYM8 510 aa8.02□□□□□ -1.13
SMC4-227ENST00000497984 ZC3H12CQ9C0D7 883 aaKnown RBP8.02□□□□□ -1.13
SMC4-227ENST00000497984 DMRTB1Q96MA1 342 aa8.01□□□□□ -1.13
SMC4-227ENST00000497984 DISC1Q9NRI5 854 aa8.01□□□□□ -1.13
SMC4-227ENST00000497984 KRT82Q9NSB4 513 aa8.01□□□□□ -1.13
SMC4-227ENST00000497984 GSTP1P09211 210 aaKnown RBP8□□□□□ -1.13
SMC4-227ENST00000497984 ID3Q02535 119 aa8□□□□□ -1.13
SMC4-227ENST00000497984 CDK5R2Q13319 367 aa8□□□□□ -1.13
SMC4-227ENST00000497984 OGFOD2Q6N063 350 aa8□□□□□ -1.13
SMC4-227ENST00000497984 ZNF574Q6ZN55 896 aaPredicted RBP8□□□□□ -1.13
SMC4-227ENST00000497984 PDZD3Q86UT5 571 aa8□□□□□ -1.13
SMC4-227ENST00000497984 TMC1Q8TDI8 760 aa8□□□□□ -1.13
SMC4-227ENST00000497984 SLFN14P0C7P3 912 aa7.99□□□□□ -1.13
SMC4-227ENST00000497984 JUNBP17275 347 aaPredicted RBP7.99□□□□□ -1.13
SMC4-227ENST00000497984 CYP27C1Q4G0S4 372 aa7.99□□□□□ -1.13
SMC4-227ENST00000497984 PI16Q6UXB8 463 aa7.99□□□□□ -1.13
SMC4-227ENST00000497984 SPRED2Q7Z698 418 aa7.99□□□□□ -1.13
SMC4-227ENST00000497984 ASIC4Q96FT7 647 aa7.99□□□□□ -1.13
SMC4-227ENST00000497984 ATXN3LQ9H3M9 355 aa7.99□□□□□ -1.13
SMC4-227ENST00000497984 SLC5A6Q9Y289 635 aa7.99□□□□□ -1.13
SMC4-227ENST00000497984 FAM87AP0C7U9 286 aa7.98□□□□□ -1.13
SMC4-227ENST00000497984 FCGRTP55899 365 aa7.98□□□□□ -1.13
SMC4-227ENST00000497984 DTHD1Q6ZMT9 781 aa7.98□□□□□ -1.13
SMC4-227ENST00000497984 RETREG2Q8NC44 543 aa7.98□□□□□ -1.13
SMC4-227ENST00000497984 KRTAP17-1Q9BYP8 105 aa7.98□□□□□ -1.13
SMC4-227ENST00000497984 PIDD1Q9HB75 910 aa7.98□□□□□ -1.13
SMC4-227ENST00000497984 U3KQE9 123 aa7.98□□□□□ -1.13
SMC4-227ENST00000497984 TTLL4Q14679 1199 aa7.97□□□□□ -1.13
SMC4-227ENST00000497984 SMYD4Q8IYR2 804 aaPredicted RBP7.97□□□□□ -1.13
SMC4-227ENST00000497984 STK11IPQ8N1F8 1099 aa7.97□□□□□ -1.13
SMC4-227ENST00000497984 STK35Q8TDR2 534 aa7.97□□□□□ -1.13
SMC4-227ENST00000497984 TMEM39AQ9NV64 488 aa7.97□□□□□ -1.13
SMC4-227ENST00000497984 SOWAHDA6NJG2 315 aa7.96□□□□□ -1.14
SMC4-227ENST00000497984 PAPLNO95428 1278 aa7.96□□□□□ -1.14
SMC4-227ENST00000497984 BNIP3Q12983 259 aa7.96□□□□□ -1.14
SMC4-227ENST00000497984 TMC7Q7Z402 723 aa7.96□□□□□ -1.14
SMC4-227ENST00000497984 PLD6Q8N2A8 252 aaKnown RBP7.96□□□□□ -1.14
SMC4-227ENST00000497984 FAM181AQ8N9Y4 354 aa7.96□□□□□ -1.14
SMC4-227ENST00000497984 CCER1Q8TC90 406 aaPredicted RBP7.96□□□□□ -1.14
SMC4-227ENST00000497984 BCO2Q9BYV7 579 aa7.96□□□□□ -1.14
SMC4-227ENST00000497984 GPN3Q9UHW5 284 aaPredicted RBP7.96□□□□□ -1.14
SMC4-227ENST00000497984 NEFMP07197 916 aa7.95□□□□□ -1.14
SMC4-227ENST00000497984 HCLS1P14317 486 aaPredicted RBP7.95□□□□□ -1.14
SMC4-227ENST00000497984 ZNF792Q3KQV3 632 aa7.95□□□□□ -1.14
SMC4-227ENST00000497984 POU5F2Q8N7G0 328 aa7.95□□□□□ -1.14
SMC4-227ENST00000497984 NETO1Q8TDF5 533 aa7.95□□□□□ -1.14
SMC4-227ENST00000497984 MISP3Q96FF7 219 aa7.95□□□□□ -1.14
SMC4-227ENST00000497984 KRTAP4-11Q9BYQ6 195 aa7.95□□□□□ -1.14
SMC4-227ENST00000497984 LEFTY1O75610 366 aa7.94□□□□□ -1.14
SMC4-227ENST00000497984 XRCC5P13010 732 aaKnown RBP7.94□□□□□ -1.14
SMC4-227ENST00000497984 PPP2R3AQ06190 1150 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms