RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 SF3A1Q15459 793 aaKnown RBP11.13□□□□□ -0.63
GARNL3-221ENST00000497703 ILDR2Q71H61 639 aa11.13□□□□□ -0.63
GARNL3-221ENST00000497703 PDZD3Q86UT5 571 aa11.13□□□□□ -0.63
GARNL3-221ENST00000497703 GRIN3AQ8TCU5 1115 aa11.13□□□□□ -0.63
GARNL3-221ENST00000497703 STK35Q8TDR2 534 aa11.13□□□□□ -0.63
GARNL3-221ENST00000497703 GPRASP2Q96D09 838 aa11.13□□□□□ -0.63
GARNL3-221ENST00000497703 RAD18Q9NS91 495 aa11.13□□□□□ -0.63
GARNL3-221ENST00000497703 ADAMTS1Q9UHI8 967 aa11.13□□□□□ -0.63
GARNL3-221ENST00000497703 FOXD4L6Q3SYB3 417 aaPredicted RBP11.12□□□□□ -0.63
GARNL3-221ENST00000497703 FBXL19Q6PCT2 694 aa11.12□□□□□ -0.63
GARNL3-221ENST00000497703 IGF2-ASQ6U949 168 aa11.12□□□□□ -0.63
GARNL3-221ENST00000497703 FOXD4L3Q6VB84 417 aaPredicted RBP11.12□□□□□ -0.63
GARNL3-221ENST00000497703 MRPL18Q9H0U6 180 aaKnown RBP11.12□□□□□ -0.63
GARNL3-221ENST00000497703 LOC100289279A0A1B0GTE1 492 aa11.11□□□□□ -0.63
GARNL3-221ENST00000497703 DLL1O00548 723 aa11.11□□□□□ -0.63
GARNL3-221ENST00000497703 DDX3YO15523 660 aaKnown RBP11.11□□□□□ -0.63
GARNL3-221ENST00000497703 SLFN14P0C7P3 912 aa11.11□□□□□ -0.63
GARNL3-221ENST00000497703 SEPT6Q14141 434 aa11.11□□□□□ -0.63
GARNL3-221ENST00000497703 NT5C1AQ9BXI3 368 aa11.11□□□□□ -0.63
GARNL3-221ENST00000497703 NRSN2Q9GZP1 204 aa11.11□□□□□ -0.63
GARNL3-221ENST00000497703 PCDHB5Q9Y5E4 795 aa11.11□□□□□ -0.63
GARNL3-221ENST00000497703 ROBO2Q9HCK4 1378 aa11.11□□□□□ -0.63
GARNL3-221ENST00000497703 CNTNAP5Q8WYK1 1306 aa11.1□□□□□ -0.63
GARNL3-221ENST00000497703 FAM229AH3BQW9 127 aa11.1□□□□□ -0.63
GARNL3-221ENST00000497703 SPATA31C1P0DKV0 1188 aa11.1□□□□□ -0.63
GARNL3-221ENST00000497703 TNNI2P48788 182 aa11.1□□□□□ -0.63
GARNL3-221ENST00000497703 APOBRQ0VD83 1088 aa11.1□□□□□ -0.63
GARNL3-221ENST00000497703 SLC43A3Q8NBI5 491 aa11.1□□□□□ -0.63
GARNL3-221ENST00000497703 GATAD2BQ8WXI9 593 aa11.1□□□□□ -0.63
GARNL3-221ENST00000497703 NACC1Q96RE7 527 aa11.1□□□□□ -0.63
GARNL3-221ENST00000497703 TINF2Q9BSI4 451 aa11.1□□□□□ -0.63
GARNL3-221ENST00000497703 RUSC1Q9BVN2 902 aa11.1□□□□□ -0.63
GARNL3-221ENST00000497703 KCNQ5Q9NR82 932 aa11.1□□□□□ -0.63
GARNL3-221ENST00000497703 PCDHA4Q9UN74 947 aa11.1□□□□□ -0.63
GARNL3-221ENST00000497703 ADAM11O75078 769 aa11.09□□□□□ -0.63
GARNL3-221ENST00000497703 CWF19L2Q2TBE0 894 aaKnown RBP11.09□□□□□ -0.63
GARNL3-221ENST00000497703 EXOSC6Q5RKV6 272 aaKnown RBP11.09□□□□□ -0.63
GARNL3-221ENST00000497703 RASIP1Q5U651 963 aa11.09□□□□□ -0.63
GARNL3-221ENST00000497703 FAM196AQ6ZSG2 479 aa11.09□□□□□ -0.63
GARNL3-221ENST00000497703 ACAD11Q709F0 780 aa11.09□□□□□ -0.63
GARNL3-221ENST00000497703 CCDC86Q9H6F5 360 aaKnown RBP11.09□□□□□ -0.63
GARNL3-221ENST00000497703 APBA3O96018 575 aa11.08□□□□□ -0.64
GARNL3-221ENST00000497703 GJA8P48165 433 aa11.08□□□□□ -0.64
GARNL3-221ENST00000497703 ARID5AQ03989 594 aa11.08□□□□□ -0.64
GARNL3-221ENST00000497703 NUTM2GQ5VZR2 741 aa11.08□□□□□ -0.64
GARNL3-221ENST00000497703 BNC2Q6ZN30 1099 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-221ENST00000497703 GPBAR1Q8TDU6 330 aa11.08□□□□□ -0.64
GARNL3-221ENST00000497703 UBASH3BQ8TF42 649 aa11.08□□□□□ -0.64
GARNL3-221ENST00000497703 SREK1Q8WXA9 508 aaKnown RBP11.08□□□□□ -0.64
GARNL3-221ENST00000497703 RNF208Q9H0X6 261 aa11.08□□□□□ -0.64
GARNL3-221ENST00000497703 CYP4F12Q9HCS2 524 aa11.08□□□□□ -0.64
GARNL3-221ENST00000497703 KCNK4Q9NYG8 393 aa11.08□□□□□ -0.64
GARNL3-221ENST00000497703 USP21Q9UK80 565 aa11.08□□□□□ -0.64
GARNL3-221ENST00000497703 GREM1O60565 184 aa11.07□□□□□ -0.64
GARNL3-221ENST00000497703 ECEL1O95672 775 aa11.07□□□□□ -0.64
GARNL3-221ENST00000497703 F13A1P00488 732 aa11.07□□□□□ -0.64
GARNL3-221ENST00000497703 DNAJA1P31689 397 aaKnown RBP11.07□□□□□ -0.64
GARNL3-221ENST00000497703 MPP2Q14168 576 aa11.07□□□□□ -0.64
GARNL3-221ENST00000497703 ALYREFQ86V81 257 aaKnown RBP11.07□□□□□ -0.64
GARNL3-221ENST00000497703 NKD1Q969G9 470 aa11.07□□□□□ -0.64
GARNL3-221ENST00000497703 COL9A2Q14055 689 aaPredicted RBP11.06□□□□□ -0.64
GARNL3-221ENST00000497703 HDXQ7Z353 690 aa11.06□□□□□ -0.64
GARNL3-221ENST00000497703 GAL3ST3Q96A11 431 aa11.06□□□□□ -0.64
GARNL3-221ENST00000497703 ELMO3Q96BJ8 720 aa11.06□□□□□ -0.64
GARNL3-221ENST00000497703 UBP1Q9NZI7 540 aa11.06□□□□□ -0.64
GARNL3-221ENST00000497703 RNF225M0QZC1 329 aaPredicted RBP11.05□□□□□ -0.64
GARNL3-221ENST00000497703 TM4SF5O14894 197 aa11.05□□□□□ -0.64
GARNL3-221ENST00000497703 LIG1P18858 919 aa11.05□□□□□ -0.64
GARNL3-221ENST00000497703 GARTP22102 1010 aa11.05□□□□□ -0.64
GARNL3-221ENST00000497703 NRG1Q02297 640 aaPredicted RBP11.05□□□□□ -0.64
GARNL3-221ENST00000497703 FDX2Q6P4F2 183 aa11.05□□□□□ -0.64
GARNL3-221ENST00000497703 RASGRP4Q8TDF6 673 aa11.05□□□□□ -0.64
GARNL3-221ENST00000497703 EAF1Q96JC9 268 aaPredicted RBP11.05□□□□□ -0.64
GARNL3-221ENST00000497703 TANGO6Q9C0B7 1094 aa11.05□□□□□ -0.64
GARNL3-221ENST00000497703 PICK1Q9NRD5 415 aa11.05□□□□□ -0.64
GARNL3-221ENST00000497703 USP35Q9P2H5 1018 aa11.05□□□□□ -0.64
GARNL3-221ENST00000497703 TLR3O15455 904 aaKnown RBP11.04□□□□□ -0.64
GARNL3-221ENST00000497703 AOC2O75106 756 aa11.04□□□□□ -0.64
GARNL3-221ENST00000497703 CILPO75339 1184 aa11.04□□□□□ -0.64
GARNL3-221ENST00000497703 LORP23490 312 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-221ENST00000497703 RPL6Q02878 288 aaKnown RBP11.04□□□□□ -0.64
GARNL3-221ENST00000497703 KIF4BQ2VIQ3 1234 aa11.04□□□□□ -0.64
GARNL3-221ENST00000497703 SEC16BQ96JE7 1060 aa11.04□□□□□ -0.64
GARNL3-221ENST00000497703 DRC1Q96MC2 740 aa11.04□□□□□ -0.64
GARNL3-221ENST00000497703 MEGF11A6BM72 1044 aa11.03□□□□□ -0.64
GARNL3-221ENST00000497703 C9orf172C9J069 976 aa11.03□□□□□ -0.64
GARNL3-221ENST00000497703 CTSBP07858 339 aa11.03□□□□□ -0.64
GARNL3-221ENST00000497703 MCM4P33991 863 aa11.03□□□□□ -0.64
GARNL3-221ENST00000497703 GRIK4Q16099 956 aa11.03□□□□□ -0.64
GARNL3-221ENST00000497703 SEZ6Q53EL9 994 aa11.03□□□□□ -0.64
GARNL3-221ENST00000497703 AKAP4Q5JQC9 854 aa11.03□□□□□ -0.64
GARNL3-221ENST00000497703 LRRC3Q9BY71 257 aa11.03□□□□□ -0.64
GARNL3-221ENST00000497703 CACNA2D2Q9NY47 1150 aa11.03□□□□□ -0.64
GARNL3-221ENST00000497703 SNCAIPQ9Y6H5 919 aa11.03□□□□□ -0.64
GARNL3-221ENST00000497703 SYNGAP1Q96PV0 1343 aa11.03□□□□□ -0.64
GARNL3-221ENST00000497703 FAM221AA4D161 298 aa11.02□□□□□ -0.65
GARNL3-221ENST00000497703 ZNF862O60290 1169 aa11.02□□□□□ -0.65
GARNL3-221ENST00000497703 ZNF165P49910 485 aa11.02□□□□□ -0.65
GARNL3-221ENST00000497703 WIPI1Q5MNZ9 446 aaPredicted RBP11.02□□□□□ -0.65
GARNL3-221ENST00000497703 MPRIPQ6WCQ1 1025 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms