RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 KIDINS220Q9ULH0 1771 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 HAND2P61296 217 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 SUGP1Q8IWZ8 645 aaKnown RBP14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 ACRBPQ8NEB7 543 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 CAPZA3Q96KX2 299 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 LLPHQ9BRT6 129 aaKnown RBP14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 CARMIL3Q8ND23 1372 aa14.9□□□□□ -0.02
GAPVD1-220ENST00000497580 NEXMIFQ5QGS0 1516 aa14.9□□□□□ -0.02
GAPVD1-220ENST00000497580 PATL2C9JE40 543 aaKnown RBP14.9□□□□□ -0.02
GAPVD1-220ENST00000497580 INPP5BP32019 993 aa14.9□□□□□ -0.02
GAPVD1-220ENST00000497580 BCAS4Q8TDM0 211 aa14.9□□□□□ -0.02
GAPVD1-220ENST00000497580 TUBGCP6Q96RT7 1819 aa14.9□□□□□ -0.02
GAPVD1-220ENST00000497580 ANO1Q5XXA6 986 aa14.9□□□□□ -0.02
GAPVD1-220ENST00000497580 GBP6Q6ZN66 633 aa14.9□□□□□ -0.02
GAPVD1-220ENST00000497580 PCDHA5Q9Y5H7 936 aa14.9□□□□□ -0.02
GAPVD1-220ENST00000497580 CDC27P30260 824 aa14.9□□□□□ -0.02
GAPVD1-220ENST00000497580 STX17P56962 302 aa14.9□□□□□ -0.02
GAPVD1-220ENST00000497580 RPS6KA5O75582 802 aa14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 ALDH1L1O75891 902 aa14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 USP8P40818 1118 aa14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 RAD9BQ6WBX8 426 aa14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 HOOK1Q9UJC3 728 aaKnown RBP14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 ABL1P00519 1130 aa14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 PPP2R5AQ15172 486 aa14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 HNRNPLLQ8WVV9 542 aaKnown RBP14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 SUCLG2Q96I99 432 aa14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 LGR6Q9HBX8 967 aa14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 PDIA3P30101 505 aaKnown RBP14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 ATL3Q6DD88 541 aa14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 KAT14Q9H8E8 782 aa14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 MED4Q9NPJ6 270 aa14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 SAMSN1Q9NSI8 373 aaKnown RBP14.89□□□□□ -0.03
GAPVD1-220ENST00000497580 KIF28PB7ZC32 967 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 AKR1B15C9JRZ8 316 aaPredicted RBP14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 ENC1O14682 589 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 MYL6BP14649 208 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 CCDC148Q8NFR7 591 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 CEP89Q96ST8 783 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 KCNG1Q9UIX4 513 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 MED23Q9ULK4 1368 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 SHTN1A0MZ66 631 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 SCP2P22307 547 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 RDXP35241 583 aaKnown RBP14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 FAM76AQ8TAV0 307 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 NEDD4P46934 1319 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 COL15A1P39059 1388 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 AIFM3Q96NN9 605 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 ALDH8A1Q9H2A2 487 aaPredicted RBP14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 DONSONQ9NYP3 566 aa14.88□□□□□ -0.03
GAPVD1-220ENST00000497580 PREX1Q8TCU6 1659 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 RICTORQ6R327 1708 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 GOLGA8BA8MQT2 603 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 MYO1FO00160 1098 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 COBLO75128 1261 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 FDPSP14324 419 aaKnown RBP14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 BRD2P25440 801 aaKnown RBP14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 GGCXP38435 758 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 STIM1Q13586 685 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 GRAMD1CQ8IYS0 662 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 FAM107BQ9H098 131 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 RAB21Q9UL25 225 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 GOLGA6CA6NDK9 693 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 TEX33O43247 280 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 GOLGA6DP0CG33 693 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 RXRAP19793 462 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 ZNF622Q969S3 477 aaKnown RBP eCLIP14.87□□□□□ -0.033e-7■□□□□ 10.6
GAPVD1-220ENST00000497580 NAPGQ99747 312 aaPredicted RBP14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 GOLGA6AQ9NYA3 693 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 ADGRG1Q9Y653 693 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 YEATS4O95619 227 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 CMA1P23946 247 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 FMR1Q06787 632 aaKnown RBP eCLIP14.87□□□□□ -0.033e-7■□□□□ 11.2
GAPVD1-220ENST00000497580 MCMDC2Q4G0Z9 681 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 HSP90AB3PQ58FF7 597 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 KCNV1Q6PIU1 500 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 MSANTD4Q8NCY6 345 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 CAGE1Q8TC20 777 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 GUCA1BQ9UMX6 200 aa14.87□□□□□ -0.03
GAPVD1-220ENST00000497580 FRMD3A2A2Y4 597 aa14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 GNGT1P63211 74 aa14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 MRPS25P82663 173 aaKnown RBP14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 RBL2Q08999 1139 aa14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 C19orf44Q9H6X5 657 aa14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 FRMPD1Q5SYB0 1578 aa14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 KIAA0754O94854 1291 aa14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 USP5P45974 858 aa14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 SWT1Q5T5J6 900 aaKnown RBP14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 CCDC102BQ68D86 513 aa14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 LRRC59Q96AG4 307 aaKnown RBP14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 NEUROD6Q96NK8 337 aa14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 KLF18A0A0U1RQI7 1052 aa14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 PRAMEF22A3QJZ6 481 aa14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 SYF2O95926 243 aaKnown RBP14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 RNF187Q5TA31 235 aaPredicted RBP14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 CPLX2Q6PUV4 134 aaKnown RBP14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 CD248Q9HCU0 757 aa14.86□□□□□ -0.03
GAPVD1-220ENST00000497580 SRGAP2O75044 1071 aa14.85□□□□□ -0.03
GAPVD1-220ENST00000497580 PROSER3Q2NL68 480 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms