RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 COL5A3P25940 1745 aaPredicted RBP11.4□□□□□ -0.58
SURF1-204ENST00000495952 ANKRD18BA2A2Z9 1011 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 ZNF202O95125 648 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 STARD3NLO95772 234 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 PFKFB1P16118 471 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 U2AF2P26368 475 aaKnown RBP eCLIP11.4□□□□□ -0.58
SURF1-204ENST00000495952 METAP2P50579 478 aaKnown RBP eCLIP11.4□□□□□ -0.58
SURF1-204ENST00000495952 CTSWP56202 376 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 FAM193AP78312 1265 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 METTL24Q5JXM2 366 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 APOA5Q6Q788 366 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 BRINP3Q76B58 766 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 NBPF11Q86T75 865 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 CREBRFQ8IUR6 639 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 CABLES1Q8TDN4 633 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 PKNOX2Q96KN3 472 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 CNNM2Q9H8M5 875 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 OGFRQ9NZT2 677 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 NAP1L2Q9ULW6 460 aaPredicted RBP11.4□□□□□ -0.58
SURF1-204ENST00000495952 TBC1D2BQ9UPU7 963 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 CLIC4Q9Y696 253 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 BCL9O00512 1426 aa11.4□□□□□ -0.58
SURF1-204ENST00000495952 MROH5Q6ZUA9 1318 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 A0A0G2JLW4 131 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 A0A1B0GVL5 298 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 ERVV-1B6SEH8 477 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 MCAMP43121 646 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 FOSBP53539 338 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 GUCY1B3Q02153 619 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 SCARF1Q14162 830 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 NCAPHQ15003 741 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 PTPAQ15257 358 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 DPCR1Q3MIW9 517 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 ZNF397Q8NF99 534 aaPredicted RBP11.39□□□□□ -0.59
SURF1-204ENST00000495952 ALG1Q9BT22 464 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 PUS7LQ9H0K6 701 aaKnown RBP11.39□□□□□ -0.59
SURF1-204ENST00000495952 L2HGDHQ9H9P8 463 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 DUOX1Q9NRD9 1551 aa11.39□□□□□ -0.59
SURF1-204ENST00000495952 HOOK1Q9UJC3 728 aaKnown RBP11.39□□□□□ -0.59
SURF1-204ENST00000495952 COL16A1Q07092 1604 aaPredicted RBP11.38□□□□□ -0.59
SURF1-204ENST00000495952 MROH7-TTC4A0A0A0MT08 1334 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 PNPLA7Q6ZV29 1317 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 PHLPP2Q6ZVD8 1323 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 NRAPQ86VF7 1730 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 ZBTB43O43298 467 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 PDE8AO60658 829 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 PDE8BO95263 885 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 SLU7O95391 586 aaKnown RBP11.38□□□□□ -0.59
SURF1-204ENST00000495952 GNAT2P19087 354 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.59
SURF1-204ENST00000495952 SYKP43405 635 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 MYL5Q02045 173 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 GABPB1Q06547 395 aaPredicted RBP11.38□□□□□ -0.59
SURF1-204ENST00000495952 TRIM29Q14134 588 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 CT47A1Q5JQC4 288 aaPredicted RBP11.38□□□□□ -0.59
SURF1-204ENST00000495952 RESP18Q5W5W9 173 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 KRT40Q6A162 431 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 TMED8Q6PL24 325 aaPredicted RBP11.38□□□□□ -0.59
SURF1-204ENST00000495952 CHST3Q7LGC8 479 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 NLRP10Q86W26 655 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 VPS37DQ86XT2 251 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 TTLL11Q8NHH1 800 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 DDX17Q92841 729 aaKnown RBP11.38□□□□□ -0.59
SURF1-204ENST00000495952 NBPF3Q9H094 633 aa11.38□□□□□ -0.59
SURF1-204ENST00000495952 TCRBV5S4A2TA0A5A2 114 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 KIF28PB7ZC32 967 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 KIF20AO95235 890 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 PDE6AP16499 860 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 IFNAR1P17181 557 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 FGFR2P21802 821 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 ITGA6P23229 1130 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 HAND2P61296 217 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 PPP2R5BQ15173 497 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 PUM3Q15397 648 aaKnown RBP11.37□□□□□ -0.59
SURF1-204ENST00000495952 LDHAL6AQ6ZMR3 332 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 TBC1D10CQ8IV04 446 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 TRIML1Q8N9V2 468 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 LPIN2Q92539 896 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 MAP3K14Q99558 947 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 SRRTQ9BXP5 876 aaKnown RBP11.37□□□□□ -0.59
SURF1-204ENST00000495952 KRT23Q9C075 422 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 XPO4Q9C0E2 1151 aaKnown RBP11.37□□□□□ -0.59
SURF1-204ENST00000495952 DACH1Q9UI36 760 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 DDX41Q9UJV9 622 aaKnown RBP11.37□□□□□ -0.59
SURF1-204ENST00000495952 PRDM4Q9UKN5 801 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 CCDC9Q9Y3X0 531 aaKnown RBP11.37□□□□□ -0.59
SURF1-204ENST00000495952 CCDC88AQ3V6T2 1871 aa11.37□□□□□ -0.59
SURF1-204ENST00000495952 SLIT2O94813 1529 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 GOLGA6L9A6NEM1 432 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 GOLGA8AA7E2F4 631 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 SMC2O95347 1197 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 FMNL1O95466 1100 aaPredicted RBP11.36□□□□□ -0.59
SURF1-204ENST00000495952 ZSCAN20P17040 1043 aaPredicted RBP11.36□□□□□ -0.59
SURF1-204ENST00000495952 IARSP41252 1262 aaKnown RBP11.36□□□□□ -0.59
SURF1-204ENST00000495952 FANCCQ00597 558 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 NTRK3Q16288 839 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 SLC9C2Q5TAH2 1124 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 TMC6Q7Z403 805 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 FILIP1Q7Z7B0 1213 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 DNAJC10Q8IXB1 793 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms