RNA–Protein interactions for RNA: ENST00000495802.5

SKAP2-208, Transcript of src kinase associated phosphoprotein 2, human

TSL 4

Gene SKAP2, Length 554 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKAP2-208	ENST00000495802	ZC3H12C	Q9C0D7	883 aa	Known RBP	7.73	□□□□□ -1.17
SKAP2-208	ENST00000495802	MIR1-1HG	Q9H1L0	117 aa		7.73	□□□□□ -1.17
SKAP2-208	ENST00000495802	NOP53	Q9NZM5	478 aa	Known RBP	7.73	□□□□□ -1.17
SKAP2-208	ENST00000495802	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.73	□□□□□ -1.17
SKAP2-208	ENST00000495802	CNTNAP5	Q8WYK1	1306 aa		7.73	□□□□□ -1.17
SKAP2-208	ENST00000495802	TRIM37	O94972	964 aa		7.72	□□□□□ -1.17
SKAP2-208	ENST00000495802	SCARA3	Q6AZY7	606 aa		7.72	□□□□□ -1.17
SKAP2-208	ENST00000495802	BEND7	Q8N7W2	519 aa	Predicted RBP	7.72	□□□□□ -1.17
SKAP2-208	ENST00000495802	GOLM1	Q8NBJ4	401 aa		7.72	□□□□□ -1.17
SKAP2-208	ENST00000495802	UBASH3B	Q8TF42	649 aa		7.72	□□□□□ -1.17
SKAP2-208	ENST00000495802	CCDC86	Q9H6F5	360 aa	Known RBP	7.72	□□□□□ -1.17
SKAP2-208	ENST00000495802	KRT82	Q9NSB4	513 aa		7.72	□□□□□ -1.17
SKAP2-208	ENST00000495802	GREM1	O60565	184 aa		7.71	□□□□□ -1.18
SKAP2-208	ENST00000495802	ELN	P15502	786 aa		7.71	□□□□□ -1.18
SKAP2-208	ENST00000495802	GJA8	P48165	433 aa		7.71	□□□□□ -1.18
SKAP2-208	ENST00000495802	GNL2	Q13823	731 aa	Known RBP	7.71	□□□□□ -1.18
SKAP2-208	ENST00000495802	PDE3A	Q14432	1141 aa		7.71	□□□□□ -1.18
SKAP2-208	ENST00000495802	PRRT3	Q5FWE3	981 aa		7.71	□□□□□ -1.18
SKAP2-208	ENST00000495802	MPRIP	Q6WCQ1	1025 aa		7.71	□□□□□ -1.18
SKAP2-208	ENST00000495802	BNC2	Q6ZN30	1099 aa	Predicted RBP	7.71	□□□□□ -1.18
SKAP2-208	ENST00000495802	CCDC84	Q86UT8	332 aa	Predicted RBP	7.71	□□□□□ -1.18
SKAP2-208	ENST00000495802	CACNA2D2	Q9NY47	1150 aa		7.71	□□□□□ -1.18
SKAP2-208	ENST00000495802	WISP1	O95388	367 aa		7.7	□□□□□ -1.18
SKAP2-208	ENST00000495802	F13A1	P00488	732 aa		7.7	□□□□□ -1.18
SKAP2-208	ENST00000495802	PTPN11	Q06124	597 aa	Predicted RBP	7.7	□□□□□ -1.18
SKAP2-208	ENST00000495802	DUOXA2	Q1HG44	320 aa		7.7	□□□□□ -1.18
SKAP2-208	ENST00000495802	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.7	□□□□□ -1.18
SKAP2-208	ENST00000495802	FAM196A	Q6ZSG2	479 aa		7.7	□□□□□ -1.18
SKAP2-208	ENST00000495802	GPBAR1	Q8TDU6	330 aa		7.7	□□□□□ -1.18
SKAP2-208	ENST00000495802	JARID2	Q92833	1246 aa	Predicted RBP	7.7	□□□□□ -1.18
SKAP2-208	ENST00000495802	GPRASP2	Q96D09	838 aa		7.7	□□□□□ -1.18
SKAP2-208	ENST00000495802	EAF1	Q96JC9	268 aa	Predicted RBP	7.7	□□□□□ -1.18
SKAP2-208	ENST00000495802	DLGAP3	O95886	979 aa		7.69	□□□□□ -1.18
SKAP2-208	ENST00000495802	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.69	□□□□□ -1.18
SKAP2-208	ENST00000495802	SLC43A3	Q8NBI5	491 aa		7.69	□□□□□ -1.18
SKAP2-208	ENST00000495802	GATAD2B	Q8WXI9	593 aa		7.69	□□□□□ -1.18
SKAP2-208	ENST00000495802	ACSBG1	Q96GR2	724 aa		7.69	□□□□□ -1.18
SKAP2-208	ENST00000495802	NT5C1A	Q9BXI3	368 aa		7.69	□□□□□ -1.18
SKAP2-208	ENST00000495802	UBP1	Q9NZI7	540 aa		7.69	□□□□□ -1.18
SKAP2-208	ENST00000495802	FAM221A	A4D161	298 aa		7.68	□□□□□ -1.18
SKAP2-208	ENST00000495802	ZNF862	O60290	1169 aa		7.68	□□□□□ -1.18
SKAP2-208	ENST00000495802	CILP	O75339	1184 aa		7.68	□□□□□ -1.18
SKAP2-208	ENST00000495802	LIG1	P18858	919 aa		7.68	□□□□□ -1.18
SKAP2-208	ENST00000495802	CRK	P46108	304 aa		7.68	□□□□□ -1.18
SKAP2-208	ENST00000495802	IGF2-AS	Q6U949	168 aa		7.68	□□□□□ -1.18
SKAP2-208	ENST00000495802	ACAD11	Q709F0	780 aa		7.68	□□□□□ -1.18
SKAP2-208	ENST00000495802	RASGRP4	Q8TDF6	673 aa		7.68	□□□□□ -1.18
SKAP2-208	ENST00000495802	SCARF2	Q96GP6	870 aa	Predicted RBP	7.68	□□□□□ -1.18
SKAP2-208	ENST00000495802	SPATA31C1	P0DKV0	1188 aa		7.67	□□□□□ -1.18
SKAP2-208	ENST00000495802	APOBR	Q0VD83	1088 aa		7.67	□□□□□ -1.18
SKAP2-208	ENST00000495802	GRIK4	Q16099	956 aa		7.67	□□□□□ -1.18
SKAP2-208	ENST00000495802	DIEXF	Q68CQ4	756 aa	Known RBP	7.67	□□□□□ -1.18
SKAP2-208	ENST00000495802	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.67	□□□□□ -1.18
SKAP2-208	ENST00000495802	KIAA1211	Q6ZU35	1233 aa		7.67	□□□□□ -1.18
SKAP2-208	ENST00000495802	WDR89	Q96FK6	387 aa	Predicted RBP	7.67	□□□□□ -1.18
SKAP2-208	ENST00000495802	RUSC1	Q9BVN2	902 aa		7.67	□□□□□ -1.18
SKAP2-208	ENST00000495802	LRRC3	Q9BY71	257 aa		7.67	□□□□□ -1.18
SKAP2-208	ENST00000495802	MRPL18	Q9H0U6	180 aa	Known RBP	7.67	□□□□□ -1.18
SKAP2-208	ENST00000495802	PCDHA4	Q9UN74	947 aa		7.67	□□□□□ -1.18
SKAP2-208	ENST00000495802	ROBO2	Q9HCK4	1378 aa		7.67	□□□□□ -1.18
SKAP2-208	ENST00000495802	TLR3	O15455	904 aa	Known RBP	7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	AOC2	O75106	756 aa		7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	BPNT1	O95861	308 aa		7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	COL8A1	P27658	744 aa		7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	MPP2	Q14168	576 aa		7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	KIF4B	Q2VIQ3	1234 aa		7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	EXOSC6	Q5RKV6	272 aa	Known RBP	7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	SHISA2	Q6UWI4	295 aa		7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	FBXO27	Q8NI29	283 aa		7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	SREK1	Q8WXA9	508 aa	Known RBP	7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	SPATA32	Q96LK8	384 aa		7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	WDR18	Q9BV38	432 aa		7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	TMPRSS13	Q9BYE2	586 aa		7.66	□□□□□ -1.18
SKAP2-208	ENST00000495802	SELP	P16109	830 aa		7.65	□□□□□ -1.18
SKAP2-208	ENST00000495802	DNAJA1	P31689	397 aa	Known RBP	7.65	□□□□□ -1.18
SKAP2-208	ENST00000495802	RPL6	Q02878	288 aa	Known RBP	7.65	□□□□□ -1.18
SKAP2-208	ENST00000495802	ARID5A	Q03989	594 aa		7.65	□□□□□ -1.18
SKAP2-208	ENST00000495802	VPS37D	Q86XT2	251 aa		7.65	□□□□□ -1.18
SKAP2-208	ENST00000495802	NKD1	Q969G9	470 aa		7.65	□□□□□ -1.18
SKAP2-208	ENST00000495802	RNF208	Q9H0X6	261 aa		7.65	□□□□□ -1.18
SKAP2-208	ENST00000495802	RAD18	Q9NS91	495 aa		7.65	□□□□□ -1.18
SKAP2-208	ENST00000495802	MEGF11	A6BM72	1044 aa		7.64	□□□□□ -1.19
SKAP2-208	ENST00000495802	ATF4	P18848	351 aa	Predicted RBP	7.64	□□□□□ -1.19
SKAP2-208	ENST00000495802	CDK8	P49336	464 aa		7.64	□□□□□ -1.19
SKAP2-208	ENST00000495802	SF3A1	Q15459	793 aa	Known RBP	7.64	□□□□□ -1.19
SKAP2-208	ENST00000495802	CWF19L2	Q2TBE0	894 aa	Known RBP	7.64	□□□□□ -1.19
SKAP2-208	ENST00000495802	SEZ6	Q53EL9	994 aa		7.64	□□□□□ -1.19
SKAP2-208	ENST00000495802	WIPI1	Q5MNZ9	446 aa	Predicted RBP	7.64	□□□□□ -1.19
SKAP2-208	ENST00000495802	REC114	Q7Z4M0	266 aa		7.64	□□□□□ -1.19
SKAP2-208	ENST00000495802	SLITRK4	Q8IW52	837 aa		7.64	□□□□□ -1.19
SKAP2-208	ENST00000495802	PLPPR2	Q96GM1	343 aa		7.64	□□□□□ -1.19
SKAP2-208	ENST00000495802	GML	Q99445	158 aa		7.64	□□□□□ -1.19
SKAP2-208	ENST00000495802	PCDHGC5	Q9Y5F6	944 aa		7.64	□□□□□ -1.19
SKAP2-208	ENST00000495802	SYNGAP1	Q96PV0	1343 aa		7.63	□□□□□ -1.19
SKAP2-208	ENST00000495802	FAM181B	A6NEQ2	426 aa		7.63	□□□□□ -1.19
SKAP2-208	ENST00000495802		F8W735	103 aa	Predicted RBP	7.63	□□□□□ -1.19
SKAP2-208	ENST00000495802	SLFN14	P0C7P3	912 aa		7.63	□□□□□ -1.19
SKAP2-208	ENST00000495802	INPP5A	Q14642	412 aa		7.63	□□□□□ -1.19
SKAP2-208	ENST00000495802	AKAP4	Q5JQC9	854 aa		7.63	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms