RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 NBPF3Q9H094 633 aa8.81□□□□□ -1
FN1-225ENST00000494446 DNAH12Q6ZR08 3092 aa8.81□□□□□ -1
FN1-225ENST00000494446 SNAP23O00161 211 aa8.8□□□□□ -1
FN1-225ENST00000494446 ANKLE1Q8NAG6 615 aa8.8□□□□□ -1
FN1-225ENST00000494446 PXYLP1Q8TE99 480 aa8.8□□□□□ -1
FN1-225ENST00000494446 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.8□□□□□ -1
FN1-225ENST00000494446 PNNQ9H307 717 aaKnown RBP8.8□□□□□ -1
FN1-225ENST00000494446 C11orf49Q9H6J7 331 aa8.8□□□□□ -1
FN1-225ENST00000494446 PHAXQ9H814 394 aaKnown RBP8.8□□□□□ -1
FN1-225ENST00000494446 MYO9BQ13459 2157 aa8.8□□□□□ -1
FN1-225ENST00000494446 PTPRFP10586 1907 aa8.8□□□□□ -1
FN1-225ENST00000494446 CYP2C8P10632 490 aa8.79□□□□□ -1
FN1-225ENST00000494446 BCRP11274 1271 aa8.79□□□□□ -1
FN1-225ENST00000494446 FKBP1AP62942 108 aaKnown RBP8.79□□□□□ -1
FN1-225ENST00000494446 PPATQ06203 517 aa8.79□□□□□ -1
FN1-225ENST00000494446 ZNF804AQ7Z570 1209 aa8.79□□□□□ -1
FN1-225ENST00000494446 DZIP1LQ8IYY4 767 aaKnown RBP8.79□□□□□ -1
FN1-225ENST00000494446 MYLIPQ8WY64 445 aa8.79□□□□□ -1
FN1-225ENST00000494446 MPHOSPH8Q99549 860 aa8.79□□□□□ -1
FN1-225ENST00000494446 TTF2Q9UNY4 1162 aaKnown RBP8.79□□□□□ -1
FN1-225ENST00000494446 MUC3AQ02505 3323 aa8.79□□□□□ -1
FN1-225ENST00000494446 COL2A1P02458 1487 aaPredicted RBP8.78□□□□□ -1
FN1-225ENST00000494446 CHL1O00533 1208 aa8.78□□□□□ -1
FN1-225ENST00000494446 TNPO2O14787 897 aaKnown RBP8.78□□□□□ -1
FN1-225ENST00000494446 TAF5LO75529 589 aa8.78□□□□□ -1
FN1-225ENST00000494446 PRKAR2AP13861 404 aaKnown RBP8.78□□□□□ -1
FN1-225ENST00000494446 IL1R1P14778 569 aa8.78□□□□□ -1
FN1-225ENST00000494446 CACNB3P54284 484 aa8.78□□□□□ -1
FN1-225ENST00000494446 CHRNDQ07001 517 aa8.78□□□□□ -1
FN1-225ENST00000494446 IRF5Q13568 498 aa8.78□□□□□ -1
FN1-225ENST00000494446 PARK7Q99497 189 aaKnown RBP8.78□□□□□ -1
FN1-225ENST00000494446 SEMA6BQ9H3T3 888 aa8.78□□□□□ -1
FN1-225ENST00000494446 TCF20Q9UGU0 1960 aaKnown RBP8.77□□□□□ -1
FN1-225ENST00000494446 HOXB7P09629 217 aa8.77□□□□□ -1.01
FN1-225ENST00000494446 ITGA6P23229 1130 aa8.77□□□□□ -1.01
FN1-225ENST00000494446 INPP5BP32019 993 aa8.77□□□□□ -1.01
FN1-225ENST00000494446 CRKP46108 304 aa8.77□□□□□ -1.01
FN1-225ENST00000494446 LMOD3Q0VAK6 560 aa8.77□□□□□ -1.01
FN1-225ENST00000494446 MAP3K12Q12852 859 aa8.77□□□□□ -1.01
FN1-225ENST00000494446 NEUROD2Q15784 382 aa8.77□□□□□ -1.01
FN1-225ENST00000494446 TJAP1Q5JTD0 557 aa8.77□□□□□ -1.01
FN1-225ENST00000494446 DUSP27Q5VZP5 1158 aa8.77□□□□□ -1.01
FN1-225ENST00000494446 METTL22Q9BUU2 404 aaPredicted RBP8.77□□□□□ -1.01
FN1-225ENST00000494446 PLSCR2Q9NRY7 297 aa8.77□□□□□ -1.01
FN1-225ENST00000494446 SERPINA10Q9UK55 444 aa8.77□□□□□ -1.01
FN1-225ENST00000494446 FRMPD3Q5JV73 1810 aa8.77□□□□□ -1.01
FN1-225ENST00000494446 PLXNB2O15031 1838 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 LTBP2Q14767 1821 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 FOSL2P15408 326 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 TMPOP42166 694 aaKnown RBP8.76□□□□□ -1.01
FN1-225ENST00000494446 MOGSQ13724 837 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 MFSD14BQ5SR56 506 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 DCAF15Q66K64 600 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 GPAT2Q6NUI2 795 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 MIGA2Q7L4E1 593 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 COA7Q96BR5 231 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 HOOK2Q96ED9 719 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 LBHD1Q9BQE6 289 aaPredicted RBP8.76□□□□□ -1.01
FN1-225ENST00000494446 ZNF341Q9BYN7 854 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 HMX1Q9NP08 348 aaPredicted RBP8.76□□□□□ -1.01
FN1-225ENST00000494446 KCNH4Q9UQ05 1017 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 MAST2Q6P0Q8 1798 aa8.76□□□□□ -1.01
FN1-225ENST00000494446 PLIN1O60240 522 aa8.75□□□□□ -1.01
FN1-225ENST00000494446 GABBR2O75899 941 aa8.75□□□□□ -1.01
FN1-225ENST00000494446 DDX58O95786 925 aaKnown RBP8.75□□□□□ -1.01
FN1-225ENST00000494446 TRIM32Q13049 653 aa8.75□□□□□ -1.01
FN1-225ENST00000494446 C15orf52Q6ZUT6 534 aaKnown RBP8.75□□□□□ -1.01
FN1-225ENST00000494446 UBE3BQ7Z3V4 1068 aa8.75□□□□□ -1.01
FN1-225ENST00000494446 MAP3K2Q9Y2U5 619 aa8.75□□□□□ -1.01
FN1-225ENST00000494446 MYH13Q9UKX3 1938 aa8.75□□□□□ -1.01
FN1-225ENST00000494446 CDH23Q9H251 3354 aa8.75□□□□□ -1.01
FN1-225ENST00000494446 PFASO15067 1338 aa8.75□□□□□ -1.01
FN1-225ENST00000494446 PHIPQ8WWQ0 1821 aa8.75□□□□□ -1.01
FN1-225ENST00000494446 PIEZO1Q92508 2521 aa8.74□□□□□ -1.01
FN1-225ENST00000494446 HMGCRP04035 888 aa8.74□□□□□ -1.01
FN1-225ENST00000494446 IGKV5-2P06315 115 aa8.74□□□□□ -1.01
FN1-225ENST00000494446 LRRC26Q2I0M4 334 aa8.74□□□□□ -1.01
FN1-225ENST00000494446 GADL1Q6ZQY3 521 aa8.74□□□□□ -1.01
FN1-225ENST00000494446 TMOD2Q9NZR1 351 aa8.74□□□□□ -1.01
FN1-225ENST00000494446 OGDHLQ9ULD0 1010 aa8.74□□□□□ -1.01
FN1-225ENST00000494446 DOCK2Q92608 1830 aa8.73□□□□□ -1.01
FN1-225ENST00000494446 ELL2O00472 640 aaPredicted RBP8.73□□□□□ -1.01
FN1-225ENST00000494446 NEXNQ0ZGT2 675 aa8.73□□□□□ -1.01
FN1-225ENST00000494446 CWF19L2Q2TBE0 894 aaKnown RBP8.73□□□□□ -1.01
FN1-225ENST00000494446 FAM83AQ86UY5 434 aa8.73□□□□□ -1.01
FN1-225ENST00000494446 SMCR8Q8TEV9 937 aaPredicted RBP8.73□□□□□ -1.01
FN1-225ENST00000494446 TTYH1Q9H313 450 aaPredicted RBP8.73□□□□□ -1.01
FN1-225ENST00000494446 CLSPNQ9HAW4 1339 aa8.73□□□□□ -1.01
FN1-225ENST00000494446 ANKRD18BA2A2Z9 1011 aa8.72□□□□□ -1.01
FN1-225ENST00000494446 C19orf67A6NJJ6 358 aa8.72□□□□□ -1.01
FN1-225ENST00000494446 CXCL11O14625 94 aa8.72□□□□□ -1.01
FN1-225ENST00000494446 SHHQ15465 462 aa8.72□□□□□ -1.01
FN1-225ENST00000494446 GRIK5Q16478 980 aa8.72□□□□□ -1.01
FN1-225ENST00000494446 FASTKD5Q7L8L6 764 aaKnown RBP8.72□□□□□ -1.01
FN1-225ENST00000494446 ANKRD13CQ8N6S4 541 aa8.72□□□□□ -1.01
FN1-225ENST00000494446 USP38Q8NB14 1042 aa8.72□□□□□ -1.01
FN1-225ENST00000494446 DOCK1Q14185 1865 aa8.72□□□□□ -1.01
FN1-225ENST00000494446 PI4KAP2A4QPH2 592 aa8.71□□□□□ -1.02
FN1-225ENST00000494446 H7C1W4 665 aa8.71□□□□□ -1.02
FN1-225ENST00000494446 CSF1RP07333 972 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms