RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 LIG1P18858 919 aa9.47□□□□□ -0.89
SSB-212ENST00000494051 UVSSAQ2YD98 709 aa9.47□□□□□ -0.89
SSB-212ENST00000494051 MEI1Q5TIA1 1274 aa9.47□□□□□ -0.89
SSB-212ENST00000494051 ARMC10Q8N2F6 343 aa9.47□□□□□ -0.89
SSB-212ENST00000494051 EMILIN2Q9BXX0 1053 aa9.47□□□□□ -0.89
SSB-212ENST00000494051 K7ELQ4 463 aaPredicted RBP9.46□□□□□ -0.9
SSB-212ENST00000494051 TIAF1O95411 115 aa9.46□□□□□ -0.9
SSB-212ENST00000494051 H2AFB1P0C5Y9 115 aa9.46□□□□□ -0.9
SSB-212ENST00000494051 H2AFB2P0C5Z0 115 aa9.46□□□□□ -0.9
SSB-212ENST00000494051 SOX4Q06945 474 aaPredicted RBP9.46□□□□□ -0.9
SSB-212ENST00000494051 CCDC85BQ15834 202 aaPredicted RBP9.46□□□□□ -0.9
SSB-212ENST00000494051 MAP1SQ66K74 1059 aaPredicted RBP9.46□□□□□ -0.9
SSB-212ENST00000494051 PDZD3Q86UT5 571 aa9.46□□□□□ -0.9
SSB-212ENST00000494051 ANKRD24Q8TF21 1146 aa9.46□□□□□ -0.9
SSB-212ENST00000494051 MYRFLQ96LU7 910 aa9.46□□□□□ -0.9
SSB-212ENST00000494051 BTBD11A6QL63 1104 aa9.45□□□□□ -0.9
SSB-212ENST00000494051 DYRK3O43781 588 aa9.45□□□□□ -0.9
SSB-212ENST00000494051 AOC2O75106 756 aa9.45□□□□□ -0.9
SSB-212ENST00000494051 ADH5P11766 374 aa9.45□□□□□ -0.9
SSB-212ENST00000494051 BMP3P12645 472 aa9.45□□□□□ -0.9
SSB-212ENST00000494051 PRR23CQ6ZRP0 262 aa9.45□□□□□ -0.9
SSB-212ENST00000494051 SV2BQ7L1I2 683 aa9.45□□□□□ -0.9
SSB-212ENST00000494051 WDR89Q96FK6 387 aaPredicted RBP9.45□□□□□ -0.9
SSB-212ENST00000494051 KCNF1Q9H3M0 494 aa9.45□□□□□ -0.9
SSB-212ENST00000494051 CTSHP09668 335 aa9.44□□□□□ -0.9
SSB-212ENST00000494051 ZNF16P17020 682 aaPredicted RBP9.44□□□□□ -0.9
SSB-212ENST00000494051 BMP6P22004 513 aa9.44□□□□□ -0.9
SSB-212ENST00000494051 ITGAEP38570 1179 aa9.44□□□□□ -0.9
SSB-212ENST00000494051 USP11P51784 963 aa9.44□□□□□ -0.9
SSB-212ENST00000494051 HNRNPUQ00839 825 aaKnown RBP eCLIP9.44□□□□□ -0.9
SSB-212ENST00000494051 TAF1CQ15572 869 aaPredicted RBP9.44□□□□□ -0.9
SSB-212ENST00000494051 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.44□□□□□ -0.9
SSB-212ENST00000494051 DYMQ7RTS9 669 aa9.44□□□□□ -0.9
SSB-212ENST00000494051 GRIN3AQ8TCU5 1115 aa9.44□□□□□ -0.9
SSB-212ENST00000494051 WDR18Q9BV38 432 aa9.44□□□□□ -0.9
SSB-212ENST00000494051 BCL11AQ9H165 835 aa9.44□□□□□ -0.9
SSB-212ENST00000494051 AP4E1Q9UPM8 1137 aa9.44□□□□□ -0.9
SSB-212ENST00000494051 ZNF862O60290 1169 aa9.43□□□□□ -0.9
SSB-212ENST00000494051 SLFN14P0C7P3 912 aa9.43□□□□□ -0.9
SSB-212ENST00000494051 PCNX4Q63HM2 1172 aa9.43□□□□□ -0.9
SSB-212ENST00000494051 FAM20CQ8IXL6 584 aa9.43□□□□□ -0.9
SSB-212ENST00000494051 ACSBG1Q96GR2 724 aa9.43□□□□□ -0.9
SSB-212ENST00000494051 CRELD1Q96HD1 420 aa9.43□□□□□ -0.9
SSB-212ENST00000494051 KRT82Q9NSB4 513 aa9.43□□□□□ -0.9
SSB-212ENST00000494051 STOML1Q9UBI4 398 aa9.43□□□□□ -0.9
SSB-212ENST00000494051 RAXQ9Y2V3 346 aa9.43□□□□□ -0.9
SSB-212ENST00000494051 RXRBP28702 533 aa9.42□□□□□ -0.9
SSB-212ENST00000494051 ZNF252P-AS1Q0IIN9 211 aa9.42□□□□□ -0.9
SSB-212ENST00000494051 LRRC14Q15048 493 aa9.42□□□□□ -0.9
SSB-212ENST00000494051 MAP3K11Q16584 847 aa9.42□□□□□ -0.9
SSB-212ENST00000494051 SGO2Q562F6 1265 aa9.42□□□□□ -0.9
SSB-212ENST00000494051 LLGL2Q6P1M3 1020 aa9.42□□□□□ -0.9
SSB-212ENST00000494051 MPRIPQ6WCQ1 1025 aa9.42□□□□□ -0.9
SSB-212ENST00000494051 C2CD4AQ8NCU7 369 aaPredicted RBP9.42□□□□□ -0.9
SSB-212ENST00000494051 RASIP1Q5U651 963 aa9.41□□□□□ -0.9
SSB-212ENST00000494051 TTBK2Q6IQ55 1244 aa9.41□□□□□ -0.9
SSB-212ENST00000494051 BEND4Q6ZU67 534 aa9.41□□□□□ -0.9
SSB-212ENST00000494051 PPP1R9AQ9ULJ8 1098 aa9.41□□□□□ -0.9
SSB-212ENST00000494051 HIF3AQ9Y2N7 669 aa9.41□□□□□ -0.9
SSB-212ENST00000494051 ACTL7BQ9Y614 415 aa9.41□□□□□ -0.9
SSB-212ENST00000494051 MAP4P27816 1152 aaKnown RBP9.4□□□□□ -0.9
SSB-212ENST00000494051 KIF4BQ2VIQ3 1234 aa9.4□□□□□ -0.9
SSB-212ENST00000494051 GPBAR1Q8TDU6 330 aa9.4□□□□□ -0.9
SSB-212ENST00000494051 FBLIM1Q8WUP2 373 aa9.4□□□□□ -0.9
SSB-212ENST00000494051 CYP8B1Q9UNU6 501 aa9.4□□□□□ -0.9
SSB-212ENST00000494051 CCDC9Q9Y3X0 531 aaKnown RBP9.4□□□□□ -0.9
SSB-212ENST00000494051 USP31Q70CQ4 1352 aa9.39□□□□□ -0.91
SSB-212ENST00000494051 HMX2A2RU54 273 aa9.39□□□□□ -0.91
SSB-212ENST00000494051 ASPAP45381 313 aa9.39□□□□□ -0.91
SSB-212ENST00000494051 ST13P50502 369 aaKnown RBP9.39□□□□□ -0.91
SSB-212ENST00000494051 ID3Q02535 119 aa9.39□□□□□ -0.91
SSB-212ENST00000494051 PRSS36Q5K4E3 855 aa9.39□□□□□ -0.91
SSB-212ENST00000494051 CDPF1Q6NVV7 123 aa9.39□□□□□ -0.91
SSB-212ENST00000494051 CLEC10AQ8IUN9 316 aa9.39□□□□□ -0.91
SSB-212ENST00000494051 TRIM42Q8IWZ5 723 aa9.39□□□□□ -0.91
SSB-212ENST00000494051 C7orf69Q9H7B7 122 aa9.39□□□□□ -0.91
SSB-212ENST00000494051 SYNGAP1Q96PV0 1343 aa9.38□□□□□ -0.91
SSB-212ENST00000494051 RBM47A0AV96 593 aaKnown RBP9.38□□□□□ -0.91
SSB-212ENST00000494051 RAB6AP20340 208 aa9.38□□□□□ -0.91
SSB-212ENST00000494051 LMNB1P20700 586 aa9.38□□□□□ -0.91
SSB-212ENST00000494051 FAM83CQ9BQN1 747 aa9.38□□□□□ -0.91
SSB-212ENST00000494051 FAM105AQ9NUU6 356 aa9.38□□□□□ -0.91
SSB-212ENST00000494051 TMPRSS2O15393 492 aa9.37□□□□□ -0.91
SSB-212ENST00000494051 TRIM37O94972 964 aa9.37□□□□□ -0.91
SSB-212ENST00000494051 FSTP19883 344 aa9.37□□□□□ -0.91
SSB-212ENST00000494051 MRPL58Q14197 206 aaKnown RBP9.37□□□□□ -0.91
SSB-212ENST00000494051 NOC4LQ9BVI4 516 aaKnown RBP9.37□□□□□ -0.91
SSB-212ENST00000494051 YIPF2Q9BWQ6 316 aa9.37□□□□□ -0.91
SSB-212ENST00000494051 CRIM1Q9NZV1 1036 aa9.37□□□□□ -0.91
SSB-212ENST00000494051 FAM95CA0A1B0GW59 222 aa9.36□□□□□ -0.91
SSB-212ENST00000494051 ITGB7P26010 798 aa9.36□□□□□ -0.91
SSB-212ENST00000494051 LIG3P49916 1009 aa9.36□□□□□ -0.91
SSB-212ENST00000494051 NFKBIBQ15653 356 aa9.36□□□□□ -0.91
SSB-212ENST00000494051 RGS22Q8NE09 1264 aa9.36□□□□□ -0.91
SSB-212ENST00000494051 PCDHA4Q9UN74 947 aa9.36□□□□□ -0.91
SSB-212ENST00000494051 PCDHGC5Q9Y5F6 944 aa9.36□□□□□ -0.91
SSB-212ENST00000494051 F6X3S4 739 aa9.35□□□□□ -0.91
SSB-212ENST00000494051 NFICP08651 508 aa9.35□□□□□ -0.91
SSB-212ENST00000494051 ZC3H12AQ5D1E8 599 aaKnown RBP9.35□□□□□ -0.91
SSB-212ENST00000494051 FANCD2OSQ96PS1 177 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms