RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 MKL1Q969V6 931 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 FERD3LQ96RJ6 166 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 GGA1Q9UJY5 639 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 R3HCC1Q9Y3T6 440 aaKnown RBP9.14□□□□□ -0.95
SMC2-205ENST00000493955 TNNI3KQ59H18 835 aa9.13□□□□□ -0.95
SMC2-205ENST00000493955 PDZD3Q86UT5 571 aa9.13□□□□□ -0.95
SMC2-205ENST00000493955 REXO1Q8N1G1 1221 aaKnown RBP9.13□□□□□ -0.95
SMC2-205ENST00000493955 SOX17Q9H6I2 414 aaPredicted RBP9.13□□□□□ -0.95
SMC2-205ENST00000493955 SOX1O00570 391 aaPredicted RBP9.12□□□□□ -0.95
SMC2-205ENST00000493955 TRIM37O94972 964 aa9.12□□□□□ -0.95
SMC2-205ENST00000493955 ALAS2P22557 587 aa9.12□□□□□ -0.95
SMC2-205ENST00000493955 EIF6P56537 245 aaKnown RBP9.12□□□□□ -0.95
SMC2-205ENST00000493955 SDE2Q6IQ49 451 aa9.12□□□□□ -0.95
SMC2-205ENST00000493955 BRMS1Q9HCU9 246 aa9.12□□□□□ -0.95
SMC2-205ENST00000493955 SMAD7O15105 426 aaKnown RBP9.11□□□□□ -0.95
SMC2-205ENST00000493955 EIF4EBP3O60516 100 aaPredicted RBP9.11□□□□□ -0.95
SMC2-205ENST00000493955 GSTP1P09211 210 aaKnown RBP9.11□□□□□ -0.95
SMC2-205ENST00000493955 RPL6Q02878 288 aaKnown RBP9.11□□□□□ -0.95
SMC2-205ENST00000493955 FBXW10Q5XX13 1052 aa9.11□□□□□ -0.95
SMC2-205ENST00000493955 SLCO4C1Q6ZQN7 724 aa9.11□□□□□ -0.95
SMC2-205ENST00000493955 GOLGA6L1Q8N7Z2 621 aa9.11□□□□□ -0.95
SMC2-205ENST00000493955 NUDT8Q8WV74 236 aa9.11□□□□□ -0.95
SMC2-205ENST00000493955 CRBNQ96SW2 442 aa9.11□□□□□ -0.95
SMC2-205ENST00000493955 ZNRF3Q9ULT6 936 aa9.11□□□□□ -0.95
SMC2-205ENST00000493955 IMPDH2P12268 514 aa9.1□□□□□ -0.95
SMC2-205ENST00000493955 GIPRP48546 466 aa9.1□□□□□ -0.95
SMC2-205ENST00000493955 MAP1SQ66K74 1059 aaPredicted RBP9.1□□□□□ -0.95
SMC2-205ENST00000493955 GK5Q6ZS86 529 aa9.1□□□□□ -0.95
SMC2-205ENST00000493955 JAZF1Q86VZ6 243 aa9.1□□□□□ -0.95
SMC2-205ENST00000493955 OR6P1Q8NGX9 317 aa9.1□□□□□ -0.95
SMC2-205ENST00000493955 JPH1Q9HDC5 661 aaPredicted RBP9.1□□□□□ -0.95
SMC2-205ENST00000493955 GDF2Q9UK05 429 aaPredicted RBP9.1□□□□□ -0.95
SMC2-205ENST00000493955 IGF1RP08069 1367 aa9.09□□□□□ -0.95
SMC2-205ENST00000493955 NCLP19338 710 aaKnown RBP9.09□□□□□ -0.95
SMC2-205ENST00000493955 GSTM4Q03013 218 aa9.09□□□□□ -0.95
SMC2-205ENST00000493955 PTPN11Q06124 597 aaPredicted RBP9.09□□□□□ -0.95
SMC2-205ENST00000493955 GRIK5Q16478 980 aa9.09□□□□□ -0.95
SMC2-205ENST00000493955 NLGN1Q8N2Q7 840 aa9.09□□□□□ -0.95
SMC2-205ENST00000493955 IL22RA1Q8N6P7 574 aa9.09□□□□□ -0.95
SMC2-205ENST00000493955 FAM169BQ8N8A8 192 aa9.09□□□□□ -0.95
SMC2-205ENST00000493955 SLC7A3Q8WY07 619 aa9.09□□□□□ -0.95
SMC2-205ENST00000493955 SRPK1Q96SB4 655 aaKnown RBP9.09□□□□□ -0.95
SMC2-205ENST00000493955 PPME1Q9Y570 386 aa9.09□□□□□ -0.95
SMC2-205ENST00000493955 CDC25BP30305 580 aa9.08□□□□□ -0.96
SMC2-205ENST00000493955 PIP4K2BP78356 416 aa9.08□□□□□ -0.96
SMC2-205ENST00000493955 CLCQ05315 142 aa9.08□□□□□ -0.96
SMC2-205ENST00000493955 FAM117BQ6P1L5 589 aa9.08□□□□□ -0.96
SMC2-205ENST00000493955 GPR161Q8N6U8 529 aaKnown RBP9.08□□□□□ -0.96
SMC2-205ENST00000493955 KCNB2Q92953 911 aa9.08□□□□□ -0.96
SMC2-205ENST00000493955 WNT8BQ93098 351 aa9.08□□□□□ -0.96
SMC2-205ENST00000493955 CACNA2D2Q9NY47 1150 aa9.08□□□□□ -0.96
SMC2-205ENST00000493955 STARD13Q9Y3M8 1113 aa9.08□□□□□ -0.96
SMC2-205ENST00000493955 CYP11A1P05108 521 aa9.07□□□□□ -0.96
SMC2-205ENST00000493955 ARL4DP49703 201 aa9.07□□□□□ -0.96
SMC2-205ENST00000493955 C19orf57Q0VDD7 668 aa9.07□□□□□ -0.96
SMC2-205ENST00000493955 MPRIPQ6WCQ1 1025 aa9.07□□□□□ -0.96
SMC2-205ENST00000493955 SNTG2Q9NY99 539 aa9.07□□□□□ -0.96
SMC2-205ENST00000493955 ANKRD62A6NC57 917 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 ALBP02768 609 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 EPXP11678 715 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 BAG6P46379 1132 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 KCNMA1Q12791 1236 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 RASA3Q14644 834 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 HGSNATQ68CP4 663 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 KANK3Q6NY19 840 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 TXNDC11Q6PKC3 985 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.06□□□□□ -0.96
SMC2-205ENST00000493955 C20orf204Q6ZNR8 217 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 LRP10Q7Z4F1 713 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 RBBP8NLQ8NC74 664 aaPredicted RBP9.06□□□□□ -0.96
SMC2-205ENST00000493955 DEPDC7Q96QD5 511 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 CORO1BQ9BR76 489 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 EHMT1Q9H9B1 1298 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 ACTR10Q9NZ32 417 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 POLR3KQ9Y2Y1 108 aaPredicted RBP9.06□□□□□ -0.96
SMC2-205ENST00000493955 PCDHB14Q9Y5E9 798 aa9.06□□□□□ -0.96
SMC2-205ENST00000493955 MRPL42Q9Y6G3 142 aaKnown RBP9.06□□□□□ -0.96
SMC2-205ENST00000493955 LINC01387J3KSC0 135 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 VSIG8P0DPA2 414 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 LSRQ86X29 649 aaPredicted RBP9.05□□□□□ -0.96
SMC2-205ENST00000493955 ACSBG1Q96GR2 724 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 ZC3H12CQ9C0D7 883 aaKnown RBP9.05□□□□□ -0.96
SMC2-205ENST00000493955 NRSN2Q9GZP1 204 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 OSGEPQ9NPF4 335 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 KRT82Q9NSB4 513 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 GRIN3BO60391 1043 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 LILRB5O75023 590 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 ATE1O95260 518 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 AFF1P51825 1210 aaKnown RBP9.05□□□□□ -0.96
SMC2-205ENST00000493955 HNRNPUQ00839 825 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMC2-205ENST00000493955 POU4F3Q15319 338 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 EGFLAMQ63HQ2 1017 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 GPBAR1Q8TDU6 330 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 COL25A1Q9BXS0 654 aaPredicted RBP9.05□□□□□ -0.96
SMC2-205ENST00000493955 PCDHA4Q9UN74 947 aa9.05□□□□□ -0.96
SMC2-205ENST00000493955 FSCN2O14926 492 aa9.04□□□□□ -0.96
SMC2-205ENST00000493955 GSK3AP49840 483 aa9.04□□□□□ -0.96
SMC2-205ENST00000493955 RNFT1Q5M7Z0 435 aa9.04□□□□□ -0.96
SMC2-205ENST00000493955 WIPI1Q5MNZ9 446 aaPredicted RBP9.04□□□□□ -0.96
SMC2-205ENST00000493955 ZNF662Q6ZS27 426 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms