RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 AKNAD1Q5T1N1 836 aa11.21□□□□□ -0.62
NPHP3-209ENST00000493732 ANO1Q5XXA6 986 aa11.21□□□□□ -0.62
NPHP3-209ENST00000493732 MTERF4Q7Z6M4 381 aaKnown RBP11.21□□□□□ -0.62
NPHP3-209ENST00000493732 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.62
NPHP3-209ENST00000493732 TBC1D10CQ8IV04 446 aa11.21□□□□□ -0.62
NPHP3-209ENST00000493732 FMR1NBQ8N0W7 255 aaPredicted RBP11.21□□□□□ -0.62
NPHP3-209ENST00000493732 MAGEB6Q8N7X4 407 aa11.21□□□□□ -0.62
NPHP3-209ENST00000493732 KIAA1524Q8TCG1 905 aa11.21□□□□□ -0.62
NPHP3-209ENST00000493732 IGDCC4Q8TDY8 1250 aa11.21□□□□□ -0.62
NPHP3-209ENST00000493732 MAP7D2Q96T17 732 aa11.21□□□□□ -0.62
NPHP3-209ENST00000493732 ALG1Q9BT22 464 aa11.21□□□□□ -0.62
NPHP3-209ENST00000493732 DNAJC25Q9H1X3 360 aa11.21□□□□□ -0.62
NPHP3-209ENST00000493732 TTC12Q9H892 705 aaPredicted RBP11.21□□□□□ -0.62
NPHP3-209ENST00000493732 WWC3Q9ULE0 1092 aa11.21□□□□□ -0.62
NPHP3-209ENST00000493732 SLC12A7Q9Y666 1083 aa11.21□□□□□ -0.62
NPHP3-209ENST00000493732 SPATA31A5Q5VU36 1347 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 SPATA31A7Q8IWB4 1347 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 NID2Q14112 1375 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 PPP6R2O75170 966 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 MBD4O95243 580 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 CMA1P23946 247 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 TPM4P67936 248 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 CHAF1AQ13111 956 aaPredicted RBP11.2□□□□□ -0.62
NPHP3-209ENST00000493732 MRFAP1L1Q96HT8 127 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 TIGD1Q96MW7 591 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 GPHNQ9NQX3 736 aaPredicted RBP11.2□□□□□ -0.62
NPHP3-209ENST00000493732 LAMB2P55268 1798 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 DOCK2Q92608 1830 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 ZNF831Q5JPB2 1677 aa11.2□□□□□ -0.62
NPHP3-209ENST00000493732 GOLGA8AA7E2F4 631 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 B4E1Z4 1266 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 IFIT3O14879 490 aaKnown RBP11.19□□□□□ -0.62
NPHP3-209ENST00000493732 AP5Z1O43299 807 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 PCP11498 1178 aaKnown RBP11.19□□□□□ -0.62
NPHP3-209ENST00000493732 RBM6P78332 1123 aaKnown RBP11.19□□□□□ -0.62
NPHP3-209ENST00000493732 SSRP1Q08945 709 aaKnown RBP11.19□□□□□ -0.62
NPHP3-209ENST00000493732 UBE4AQ14139 1066 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 SLC39A14Q15043 492 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 IQCB1Q15051 598 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 CYB5R4Q7L1T6 521 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 TRIM22Q8IYM9 498 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
NPHP3-209ENST00000493732 STAG1Q8WVM7 1258 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 BPIFA3Q9BQP9 254 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 GOLPH3LQ9H4A5 285 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 LRP2BPQ9P2M1 347 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 NRAPQ86VF7 1730 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 IGSF3O75054 1194 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 POLR3DP05423 398 aaPredicted RBP11.19□□□□□ -0.62
NPHP3-209ENST00000493732 TDO2P48775 406 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 SF3B3Q15393 1217 aaKnown RBP11.19□□□□□ -0.62
NPHP3-209ENST00000493732 SAFBQ15424 915 aaKnown RBP eCLIP11.19□□□□□ -0.62
NPHP3-209ENST00000493732 ANKRD18AQ8IVF6 992 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 MARCH10Q8NA82 808 aaPredicted RBP11.19□□□□□ -0.62
NPHP3-209ENST00000493732 NOL10Q9BSC4 688 aaKnown RBP11.19□□□□□ -0.62
NPHP3-209ENST00000493732 LY9Q9HBG7 655 aa11.19□□□□□ -0.62
NPHP3-209ENST00000493732 TIAM2Q8IVF5 1701 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 UQCRHLA0A096LP55 91 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 GSG1L2A8MUP6 293 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 SEMA3EO15041 775 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 UQCRHP07919 91 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 IFNAR1P17181 557 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 U2AF2P26368 475 aaKnown RBP eCLIP11.18□□□□□ -0.62
NPHP3-209ENST00000493732 CHRNDQ07001 517 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 HSP90AA2PQ14568 343 aaPredicted RBP11.18□□□□□ -0.62
NPHP3-209ENST00000493732 CAVIN4Q5BKX8 364 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 KRT40Q6A162 431 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 SPC24Q8NBT2 197 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 ZNF830Q96NB3 372 aaPredicted RBP11.18□□□□□ -0.62
NPHP3-209ENST00000493732 FTOQ9C0B1 505 aaKnown RBP eCLIP11.18□□□□□ -0.62
NPHP3-209ENST00000493732 ZSWIM5Q9P217 1185 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 KIAA1468Q9P260 1216 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 CLIP2Q9UDT6 1046 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 SLC4A4Q9Y6R1 1079 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 PHLPP1O60346 1717 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 C4BP0C0L5 1744 aa11.18□□□□□ -0.62
NPHP3-209ENST00000493732 A0A0G2JS52 829 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 FMNL1O95466 1100 aaPredicted RBP11.17□□□□□ -0.62
NPHP3-209ENST00000493732 MICU3Q86XE3 530 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 VPS37DQ86XT2 251 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 NYXQ9GZU5 481 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 ARMT1Q9H993 441 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 SEC31BQ9NQW1 1179 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.17□□□□□ -0.62
NPHP3-209ENST00000493732 BSDC1Q9NW68 430 aaPredicted RBP11.17□□□□□ -0.62
NPHP3-209ENST00000493732 ANAPC4Q9UJX5 808 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 CLIC4Q9Y696 253 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 ZNF804BA4D1E1 1349 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 NEDD4P46934 1319 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 FAM237AA0A1B0GTK4 181 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 SMTNL1A8MU46 457 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 ADAMTS2O95450 1211 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 SLC3A2P08195 630 aaKnown RBP11.17□□□□□ -0.62
NPHP3-209ENST00000493732 NT5C2P49902 561 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 ITPK1Q13572 414 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 WTAPQ15007 396 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 NTRK3Q16288 839 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 CCDC186Q7Z3E2 898 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms