RNA–Protein interactions for RNA: ENST00000492806.5

CCDC13-208, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 1,267 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-208ENST00000492806 USP48Q86UV5 1035 aa20.32■□□□□ 0.84
CCDC13-208ENST00000492806 PI4K2BQ8TCG2 481 aa20.32■□□□□ 0.84
CCDC13-208ENST00000492806 OTUD7AQ8TE49 926 aaPredicted RBP20.32■□□□□ 0.84
CCDC13-208ENST00000492806 ZNF384Q8TF68 577 aa20.32■□□□□ 0.84
CCDC13-208ENST00000492806 ANTXR1Q9H6X2 564 aa20.32■□□□□ 0.84
CCDC13-208ENST00000492806 NDUFB9Q9Y6M9 179 aa20.32■□□□□ 0.84
CCDC13-208ENST00000492806 GPR75-ASB3A0A0A6YYF3 556 aa20.31■□□□□ 0.84
CCDC13-208ENST00000492806 CLRN2A0PK11 232 aa20.31■□□□□ 0.84
CCDC13-208ENST00000492806 TNNI2P48788 182 aa20.31■□□□□ 0.84
CCDC13-208ENST00000492806 CERS3Q8IU89 383 aa20.31■□□□□ 0.84
CCDC13-208ENST00000492806 NOL10Q9BSC4 688 aaKnown RBP20.31■□□□□ 0.84
CCDC13-208ENST00000492806 TMEM88BA6NKF7 163 aa20.3■□□□□ 0.84
CCDC13-208ENST00000492806 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.3■□□□□ 0.84
CCDC13-208ENST00000492806 OSBPL3Q9H4L5 887 aa20.3■□□□□ 0.84
CCDC13-208ENST00000492806 VEZTQ9HBM0 779 aa20.3■□□□□ 0.84
CCDC13-208ENST00000492806 ADM5C9JUS6 153 aa20.29■□□□□ 0.84
CCDC13-208ENST00000492806 BAG3O95817 575 aa20.29■□□□□ 0.84
CCDC13-208ENST00000492806 PLCG2P16885 1265 aa20.29■□□□□ 0.84
CCDC13-208ENST00000492806 BTDP43251 543 aa20.29■□□□□ 0.84
CCDC13-208ENST00000492806 PPP4CP60510 307 aa20.29■□□□□ 0.84
CCDC13-208ENST00000492806 LRRFIP1Q32MZ4 808 aaKnown RBP20.29■□□□□ 0.84
CCDC13-208ENST00000492806 ZSCAN25Q6NSZ9 544 aa20.29■□□□□ 0.84
CCDC13-208ENST00000492806 CDC42EP5Q6NZY7 148 aa20.29■□□□□ 0.84
CCDC13-208ENST00000492806 FAM83AQ86UY5 434 aa20.29■□□□□ 0.84
CCDC13-208ENST00000492806 JMYQ8N9B5 988 aa20.29■□□□□ 0.84
CCDC13-208ENST00000492806 TRAF5O00463 557 aa20.28■□□□□ 0.84
CCDC13-208ENST00000492806 CYP7A1P22680 504 aa20.28■□□□□ 0.84
CCDC13-208ENST00000492806 TSHZ3Q63HK5 1081 aa20.28■□□□□ 0.84
CCDC13-208ENST00000492806 PLEKHM2Q8IWE5 1019 aa20.28■□□□□ 0.84
CCDC13-208ENST00000492806 MAGEB6Q8N7X4 407 aa20.28■□□□□ 0.84
CCDC13-208ENST00000492806 KBTBD3Q8NAB2 608 aa20.28■□□□□ 0.84
CCDC13-208ENST00000492806 EDC3Q96F86 508 aaKnown RBP20.28■□□□□ 0.84
CCDC13-208ENST00000492806 CCDC136Q96JN2 1154 aa20.28■□□□□ 0.84
CCDC13-208ENST00000492806 DEFB129Q9H1M3 183 aa20.28■□□□□ 0.84
CCDC13-208ENST00000492806 USP40Q9NVE5 1235 aa20.28■□□□□ 0.84
CCDC13-208ENST00000492806 PDE6AP16499 860 aa20.27■□□□□ 0.84
CCDC13-208ENST00000492806 SLC9C2Q5TAH2 1124 aa20.27■□□□□ 0.84
CCDC13-208ENST00000492806 CDCA5Q96FF9 252 aa20.27■□□□□ 0.84
CCDC13-208ENST00000492806 IDI2Q9BXS1 227 aa20.27■□□□□ 0.84
CCDC13-208ENST00000492806 NPM3O75607 178 aaKnown RBP20.26■□□□□ 0.83
CCDC13-208ENST00000492806 NF2P35240 595 aa20.26■□□□□ 0.83
CCDC13-208ENST00000492806 RASA3Q14644 834 aa20.26■□□□□ 0.83
CCDC13-208ENST00000492806 TICAM2Q86XR7 235 aa20.26■□□□□ 0.83
CCDC13-208ENST00000492806 AK9Q5TCS8 1911 aa20.25■□□□□ 0.83
CCDC13-208ENST00000492806 RPAP1Q9BWH6 1393 aaPredicted RBP20.25■□□□□ 0.83
CCDC13-208ENST00000492806 TCP10L2B9ZVM9 353 aa20.25■□□□□ 0.83
CCDC13-208ENST00000492806 CELF2O95319 508 aaKnown RBP20.25■□□□□ 0.83
CCDC13-208ENST00000492806 ZFYP08048 801 aaPredicted RBP20.25■□□□□ 0.83
CCDC13-208ENST00000492806 ADD2P35612 726 aa20.25■□□□□ 0.83
CCDC13-208ENST00000492806 RHBDL3P58872 404 aa20.25■□□□□ 0.83
CCDC13-208ENST00000492806 UBE3CQ15386 1083 aa20.25■□□□□ 0.83
CCDC13-208ENST00000492806 SUPT20HL1Q3ZLR7 823 aa20.25■□□□□ 0.83
CCDC13-208ENST00000492806 PPP4R2Q9NY27 417 aa20.25■□□□□ 0.83
CCDC13-208ENST00000492806 RFX7Q2KHR2 1363 aa20.24■□□□□ 0.83
CCDC13-208ENST00000492806 ENTPD3O75355 529 aa20.24■□□□□ 0.83
CCDC13-208ENST00000492806 FKBP1BP68106 108 aa20.24■□□□□ 0.83
CCDC13-208ENST00000492806 FAM151AQ8WW52 585 aa20.24■□□□□ 0.83
CCDC13-208ENST00000492806 HOOK2Q96ED9 719 aa20.24■□□□□ 0.83
CCDC13-208ENST00000492806 MKRN1Q9UHC7 482 aaKnown RBP20.24■□□□□ 0.83
CCDC13-208ENST00000492806 FOCADQ5VW36 1801 aa20.24■□□□□ 0.83
CCDC13-208ENST00000492806 CDK5RAP2Q96SN8 1893 aa20.24■□□□□ 0.83
CCDC13-208ENST00000492806 ZNF532Q9HCE3 1301 aa20.24■□□□□ 0.83
CCDC13-208ENST00000492806 CNTNAP1P78357 1384 aa20.23■□□□□ 0.83
CCDC13-208ENST00000492806 TCRBV5S4A2TA0A5A2 114 aa20.23■□□□□ 0.83
CCDC13-208ENST00000492806 CACNB3P54284 484 aa20.23■□□□□ 0.83
CCDC13-208ENST00000492806 FMR1Q06787 632 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCDC13-208ENST00000492806 ADGRA1Q86SQ6 560 aa20.23■□□□□ 0.83
CCDC13-208ENST00000492806 TEX11Q8IYF3 940 aa20.23■□□□□ 0.83
CCDC13-208ENST00000492806 C2orf69Q8N8R5 385 aa20.23■□□□□ 0.83
CCDC13-208ENST00000492806 EVI5LQ96CN4 794 aa20.23■□□□□ 0.83
CCDC13-208ENST00000492806 AATFQ9NY61 560 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCDC13-208ENST00000492806 PAPPA2Q9BXP8 1791 aa20.23■□□□□ 0.83
CCDC13-208ENST00000492806 PCNTO95613 3336 aa20.22■□□□□ 0.83
CCDC13-208ENST00000492806 WDHD1O75717 1129 aaPredicted RBP20.22■□□□□ 0.83
CCDC13-208ENST00000492806 PDE4AP27815 886 aa20.22■□□□□ 0.83
CCDC13-208ENST00000492806 CST9Q5W186 159 aa20.22■□□□□ 0.83
CCDC13-208ENST00000492806 ZNF408Q9H9D4 720 aa20.22■□□□□ 0.83
CCDC13-208ENST00000492806 GBA2Q9HCG7 927 aaPredicted RBP20.22■□□□□ 0.83
CCDC13-208ENST00000492806 ABT1Q9ULW3 272 aaKnown RBP20.22■□□□□ 0.83
CCDC13-208ENST00000492806 SCAF8Q9UPN6 1271 aaKnown RBP20.22■□□□□ 0.83
CCDC13-208ENST00000492806 RGS3P49796 1198 aa20.21■□□□□ 0.83
CCDC13-208ENST00000492806 NFIAQ12857 509 aa20.21■□□□□ 0.83
CCDC13-208ENST00000492806 FAM198AQ9UFP1 575 aa20.21■□□□□ 0.83
CCDC13-208ENST00000492806 COL2A1P02458 1487 aaPredicted RBP20.21■□□□□ 0.83
CCDC13-208ENST00000492806 MAGEB6P1A0A0J9YX57 407 aa20.2■□□□□ 0.82
CCDC13-208ENST00000492806 RNF113AO15541 343 aaKnown RBP20.2■□□□□ 0.82
CCDC13-208ENST00000492806 DLK2Q6UY11 383 aa20.2■□□□□ 0.82
CCDC13-208ENST00000492806 MIGA1Q8NAN2 632 aa20.2■□□□□ 0.82
CCDC13-208ENST00000492806 SH3RF3Q8TEJ3 882 aaPredicted RBP20.2■□□□□ 0.82
CCDC13-208ENST00000492806 TEPSINQ96N21 525 aa20.2■□□□□ 0.82
CCDC13-208ENST00000492806 RIOK1Q9BRS2 568 aaKnown RBP20.2■□□□□ 0.82
CCDC13-208ENST00000492806 FSD1Q9BTV5 496 aa20.2■□□□□ 0.82
CCDC13-208ENST00000492806 TMEM39BQ9GZU3 492 aa20.2■□□□□ 0.82
CCDC13-208ENST00000492806 PPP1R12BO60237 982 aaPredicted RBP20.19■□□□□ 0.82
CCDC13-208ENST00000492806 DYNLL1P63167 89 aaKnown RBP20.19■□□□□ 0.82
CCDC13-208ENST00000492806 DEFB115Q30KQ5 88 aa20.19■□□□□ 0.82
CCDC13-208ENST00000492806 NBPF12Q5TAG4 269 aaPredicted RBP20.19■□□□□ 0.82
CCDC13-208ENST00000492806 PRAMEF18Q5VWM3 479 aa20.19■□□□□ 0.82
CCDC13-208ENST00000492806 APPBP2Q92624 585 aa20.19■□□□□ 0.82
CCDC13-208ENST00000492806 TLL2Q9Y6L7 1015 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms