RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 UBASH3BQ8TF42 649 aa6.26□□□□□ -1.41
CLK1-213ENST00000492793 KCNK4Q9NYG8 393 aa6.26□□□□□ -1.41
CLK1-213ENST00000492793 USP35Q9P2H5 1018 aa6.26□□□□□ -1.41
CLK1-213ENST00000492793 ADAMTS1Q9UHI8 967 aa6.26□□□□□ -1.41
CLK1-213ENST00000492793 ADAM11O75078 769 aa6.25□□□□□ -1.41
CLK1-213ENST00000492793 LIG1P18858 919 aa6.25□□□□□ -1.41
CLK1-213ENST00000492793 DNAJA1P31689 397 aaKnown RBP6.25□□□□□ -1.41
CLK1-213ENST00000492793 GRIK4Q16099 956 aa6.25□□□□□ -1.41
CLK1-213ENST00000492793 HP1BP3Q5SSJ5 553 aaPredicted RBP6.25□□□□□ -1.41
CLK1-213ENST00000492793 MPRIPQ6WCQ1 1025 aa6.25□□□□□ -1.41
CLK1-213ENST00000492793 BNC2Q6ZN30 1099 aaPredicted RBP6.25□□□□□ -1.41
CLK1-213ENST00000492793 ACAD11Q709F0 780 aa6.25□□□□□ -1.41
CLK1-213ENST00000492793 VPS37DQ86XT2 251 aa6.25□□□□□ -1.41
CLK1-213ENST00000492793 TRIM42Q8IWZ5 723 aa6.25□□□□□ -1.41
CLK1-213ENST00000492793 GPBAR1Q8TDU6 330 aa6.25□□□□□ -1.41
CLK1-213ENST00000492793 RHOVQ96L33 236 aa6.25□□□□□ -1.41
CLK1-213ENST00000492793 USP21Q9UK80 565 aa6.25□□□□□ -1.41
CLK1-213ENST00000492793 PCDHA4Q9UN74 947 aa6.25□□□□□ -1.41
CLK1-213ENST00000492793 LOC100289279A0A1B0GTE1 492 aa6.24□□□□□ -1.41
CLK1-213ENST00000492793 TRIM37O94972 964 aa6.24□□□□□ -1.41
CLK1-213ENST00000492793 CTSBP07858 339 aa6.24□□□□□ -1.41
CLK1-213ENST00000492793 MCM4P33991 863 aa6.24□□□□□ -1.41
CLK1-213ENST00000492793 APOBRQ0VD83 1088 aa6.24□□□□□ -1.41
CLK1-213ENST00000492793 GPRASP2Q96D09 838 aa6.24□□□□□ -1.41
CLK1-213ENST00000492793 SCARF2Q96GP6 870 aaPredicted RBP6.24□□□□□ -1.41
CLK1-213ENST00000492793 C8orf37Q96NL8 207 aa6.24□□□□□ -1.41
CLK1-213ENST00000492793 RUSC1Q9BVN2 902 aa6.24□□□□□ -1.41
CLK1-213ENST00000492793 CCDC86Q9H6F5 360 aaKnown RBP6.24□□□□□ -1.41
CLK1-213ENST00000492793 PICK1Q9NRD5 415 aa6.24□□□□□ -1.41
CLK1-213ENST00000492793 F13A1P00488 732 aa6.23□□□□□ -1.41
CLK1-213ENST00000492793 ELNP15502 786 aa6.23□□□□□ -1.41
CLK1-213ENST00000492793 ZNF252P-AS1Q0IIN9 211 aa6.23□□□□□ -1.41
CLK1-213ENST00000492793 AKAP4Q5JQC9 854 aa6.23□□□□□ -1.41
CLK1-213ENST00000492793 NUTM2GQ5VZR2 741 aa6.23□□□□□ -1.41
CLK1-213ENST00000492793 SHISA2Q6UWI4 295 aa6.23□□□□□ -1.41
CLK1-213ENST00000492793 PDZD3Q86UT5 571 aa6.23□□□□□ -1.41
CLK1-213ENST00000492793 NKD1Q969G9 470 aa6.23□□□□□ -1.41
CLK1-213ENST00000492793 ELMO3Q96BJ8 720 aa6.23□□□□□ -1.41
CLK1-213ENST00000492793 UBP1Q9NZI7 540 aa6.23□□□□□ -1.41
CLK1-213ENST00000492793 FAM181BA6NEQ2 426 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 DLL1O00548 723 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 WISP1O95388 367 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 APBA3O96018 575 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 SLFN14P0C7P3 912 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 ARID5AQ03989 594 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 PTPN11Q06124 597 aaPredicted RBP6.22□□□□□ -1.41
CLK1-213ENST00000492793 SEZ6Q53EL9 994 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 EXOSC6Q5RKV6 272 aaKnown RBP6.22□□□□□ -1.41
CLK1-213ENST00000492793 IGF2-ASQ6U949 168 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 FBXO27Q8NI29 283 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 GATAD2BQ8WXI9 593 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 EAF1Q96JC9 268 aaPredicted RBP6.22□□□□□ -1.41
CLK1-213ENST00000492793 TINF2Q9BSI4 451 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 TANGO6Q9C0B7 1094 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 MRPL18Q9H0U6 180 aaKnown RBP6.22□□□□□ -1.41
CLK1-213ENST00000492793 CSADQ9Y600 493 aa6.22□□□□□ -1.41
CLK1-213ENST00000492793 DCDC2CA8MYV0 355 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 SPATA31C1P0DKV0 1188 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 SF3A1Q15459 793 aaKnown RBP6.21□□□□□ -1.42
CLK1-213ENST00000492793 CWF19L2Q2TBE0 894 aaKnown RBP6.21□□□□□ -1.42
CLK1-213ENST00000492793 WIPI1Q5MNZ9 446 aaPredicted RBP6.21□□□□□ -1.42
CLK1-213ENST00000492793 FBXW10Q5XX13 1052 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 FDX2Q6P4F2 183 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.21□□□□□ -1.42
CLK1-213ENST00000492793 FAM196AQ6ZSG2 479 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 AGGF1Q8N302 714 aaeCLIP6.21□□□□□ -1.42
CLK1-213ENST00000492793 C12orf50Q8NA57 414 aaPredicted RBP6.21□□□□□ -1.42
CLK1-213ENST00000492793 GAL3ST3Q96A11 431 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 WDR89Q96FK6 387 aaPredicted RBP6.21□□□□□ -1.42
CLK1-213ENST00000492793 NT5C1AQ9BXI3 368 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 NRSN2Q9GZP1 204 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 RNF208Q9H0X6 261 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 CYP4F12Q9HCS2 524 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 KRT82Q9NSB4 513 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 AP4E1Q9UPM8 1137 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 EFR3BQ9Y2G0 817 aa6.21□□□□□ -1.42
CLK1-213ENST00000492793 PRAMEF27A3QJZ7 478 aa6.2□□□□□ -1.42
CLK1-213ENST00000492793 ZNF862O60290 1169 aa6.2□□□□□ -1.42
CLK1-213ENST00000492793 AOC2O75106 756 aa6.2□□□□□ -1.42
CLK1-213ENST00000492793 DLGAP3O95886 979 aa6.2□□□□□ -1.42
CLK1-213ENST00000492793 GARTP22102 1010 aa6.2□□□□□ -1.42
CLK1-213ENST00000492793 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
CLK1-213ENST00000492793 MPP2Q14168 576 aa6.2□□□□□ -1.42
CLK1-213ENST00000492793 ILDR2Q71H61 639 aa6.2□□□□□ -1.42
CLK1-213ENST00000492793 HDXQ7Z353 690 aa6.2□□□□□ -1.42
CLK1-213ENST00000492793 CCDC84Q86UT8 332 aaPredicted RBP6.2□□□□□ -1.42
CLK1-213ENST00000492793 CPLX3Q8WVH0 158 aa6.2□□□□□ -1.42
CLK1-213ENST00000492793 SREK1Q8WXA9 508 aaKnown RBP6.2□□□□□ -1.42
CLK1-213ENST00000492793 NACC1Q96RE7 527 aa6.2□□□□□ -1.42
CLK1-213ENST00000492793 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.2□□□□□ -1.421e-8■□□□□ 10.6
CLK1-213ENST00000492793 PRKAG2Q9UGJ0 569 aa6.2□□□□□ -1.42
CLK1-213ENST00000492793 SART1O43290 800 aaKnown RBP6.19□□□□□ -1.42
CLK1-213ENST00000492793 GRIN3BO60391 1043 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 GREM1O60565 184 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 ALX3O95076 343 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 SSBP05455 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
CLK1-213ENST00000492793 GLB1P16278 677 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 CRKP46108 304 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 GJA8P48165 433 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 NASPP49321 788 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms