RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 UBE3CQ15386 1083 aa14.52□□□□□ -0.09
HMGN1-220ENST00000492280 MYSM1Q5VVJ2 828 aa14.52□□□□□ -0.09
HMGN1-220ENST00000492280 ZNF396Q96N95 335 aaPredicted RBP14.52□□□□□ -0.09
HMGN1-220ENST00000492280 ALG1Q9BT22 464 aa14.52□□□□□ -0.09
HMGN1-220ENST00000492280 C4AP0C0L4 1744 aa14.52□□□□□ -0.09
HMGN1-220ENST00000492280 C4BP0C0L5 1744 aa14.52□□□□□ -0.09
HMGN1-220ENST00000492280 CYP2D7A0A087X1C5 515 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 PDIA4P13667 645 aaKnown RBP14.51□□□□□ -0.09
HMGN1-220ENST00000492280 TDO2P48775 406 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 KIF23Q02241 960 aaPredicted RBP14.51□□□□□ -0.09
HMGN1-220ENST00000492280 TTF1Q15361 905 aaPredicted RBP14.51□□□□□ -0.09
HMGN1-220ENST00000492280 CCDC144BQ3MJ40 725 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 TMEM67Q5HYA8 995 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 ZSCAN25Q6NSZ9 544 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 LINC00301Q8NCQ3 95 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 ENGASEQ8NFI3 743 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 ZSWIM5Q9P217 1185 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 MROH5Q6ZUA9 1318 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 CHD4Q14839 1912 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 KLRK1P26718 216 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 GUCY1A2P33402 732 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 EVCP57679 992 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 ERFEQ4G0M1 354 aa14.51□□□□□ -0.09
HMGN1-220ENST00000492280 DDX60Q8IY21 1712 aaKnown RBP14.51□□□□□ -0.09
HMGN1-220ENST00000492280 FAM160A1Q05DH4 1040 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 CHMP4CQ96CF2 233 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 LRP2BPQ9P2M1 347 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 SLC4A4Q9Y6R1 1079 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 ECM29Q5VYK3 1845 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 PHLPP1O60346 1717 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 GOLGA8AA7E2F4 631 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 GSG1L2A8MUP6 293 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 IFIT3O14879 490 aaKnown RBP14.5□□□□□ -0.09
HMGN1-220ENST00000492280 IGHMBP2P38935 993 aaKnown RBP14.5□□□□□ -0.09
HMGN1-220ENST00000492280 ZNF75DP51815 510 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 SPECC1Q5M775 1068 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 VPS37DQ86XT2 251 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 MRPS27Q92552 414 aaKnown RBP14.5□□□□□ -0.09
HMGN1-220ENST00000492280 SDF4Q9BRK5 362 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 LY9Q9HBG7 655 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 ABCC12Q96J65 1359 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 hCG_1642624A0A1W2PR95 340 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 MINDY4BA8MYZ0 360 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 PRDM1O75626 825 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 WDHD1O75717 1129 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-220ENST00000492280 UQCRFS1P1P0C7P4 283 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 MAP3K12Q12852 859 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 AOPEPQ8N6M6 819 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 CLIC6Q96NY7 704 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 SLC26A6Q9BXS9 759 aa14.5□□□□□ -0.09
HMGN1-220ENST00000492280 ATRNO75882 1429 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 ZMYM6O95789 1325 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 BAZ2AQ9UIF9 1905 aaKnown RBP14.49□□□□□ -0.09
HMGN1-220ENST00000492280 SPTLC2O15270 562 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 GNL2Q13823 731 aaKnown RBP14.49□□□□□ -0.09
HMGN1-220ENST00000492280 IQCB1Q15051 598 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 CCDC152Q4G0S7 254 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 KRT40Q6A162 431 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 LINC00116Q8NCU8 138 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 TDRD7Q8NHU6 1098 aaKnown RBP14.49□□□□□ -0.09
HMGN1-220ENST00000492280 IGDCC4Q8TDY8 1250 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 LRP5O75197 1615 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 ZBTB43O43298 467 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 TPM2P07951 284 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 DPCR1Q3MIW9 517 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 FMR1NBQ8N0W7 255 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-220ENST00000492280 FAM217BQ9NTX9 383 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-220ENST00000492280 SRP68Q9UHB9 627 aaKnown RBP14.49□□□□□ -0.09
HMGN1-220ENST00000492280 KCNJ14Q9UNX9 436 aa14.49□□□□□ -0.09
HMGN1-220ENST00000492280 ATP2B1P20020 1258 aa14.48□□□□□ -0.09
HMGN1-220ENST00000492280 HSP90AA2PQ14568 343 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-220ENST00000492280 PTPN21Q16825 1174 aa14.48□□□□□ -0.09
HMGN1-220ENST00000492280 NUP133Q8WUM0 1156 aa14.48□□□□□ -0.09
HMGN1-220ENST00000492280 RTEL1Q9NZ71 1219 aa14.48□□□□□ -0.09
HMGN1-220ENST00000492280 RAI14Q9P0K7 980 aa14.48□□□□□ -0.09
HMGN1-220ENST00000492280 CLIP2Q9UDT6 1046 aa14.48□□□□□ -0.09
HMGN1-220ENST00000492280 COL1A1P02452 1464 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-220ENST00000492280 DHX16O60231 1041 aaKnown RBP14.48□□□□□ -0.09
HMGN1-220ENST00000492280 DYNLL1P63167 89 aaKnown RBP14.48□□□□□ -0.09
HMGN1-220ENST00000492280 SYNE3Q6ZMZ3 975 aa14.48□□□□□ -0.09
HMGN1-220ENST00000492280 CELF1Q92879 486 aaKnown RBP14.48□□□□□ -0.09
HMGN1-220ENST00000492280 BECN2A8MW95 431 aa14.47□□□□□ -0.09
HMGN1-220ENST00000492280 GOLGA6L19H0YKK7 550 aa14.47□□□□□ -0.09
HMGN1-220ENST00000492280 CYP7A1P22680 504 aa14.47□□□□□ -0.09
HMGN1-220ENST00000492280 STX1AQ16623 288 aa14.47□□□□□ -0.09
HMGN1-220ENST00000492280 AMIGO3Q86WK7 504 aa14.47□□□□□ -0.09
HMGN1-220ENST00000492280 PLA2G4DQ86XP0 818 aa14.47□□□□□ -0.09
HMGN1-220ENST00000492280 KIAA1524Q8TCG1 905 aa14.47□□□□□ -0.09
HMGN1-220ENST00000492280 ZNF512BQ96KM6 892 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-220ENST00000492280 MYH2Q9UKX2 1941 aa14.47□□□□□ -0.09
HMGN1-220ENST00000492280 PATL2C9JE40 543 aaKnown RBP14.47□□□□□ -0.09
HMGN1-220ENST00000492280 ANO1Q5XXA6 986 aa14.47□□□□□ -0.09
HMGN1-220ENST00000492280 FILIP1Q7Z7B0 1213 aa14.47□□□□□ -0.09
HMGN1-220ENST00000492280 DHX40Q8IX18 779 aaKnown RBP14.47□□□□□ -0.09
HMGN1-220ENST00000492280 FBXL16Q8N461 479 aa14.47□□□□□ -0.09
HMGN1-220ENST00000492280 PFKFB1P16118 471 aa14.46□□□□□ -0.09
HMGN1-220ENST00000492280 GTF2E1P29083 439 aaPredicted RBP14.46□□□□□ -0.09
HMGN1-220ENST00000492280 NTRK3Q16288 839 aa14.46□□□□□ -0.09
HMGN1-220ENST00000492280 SLC12A7Q9Y666 1083 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms