RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 TTC22Q5TAA0 569 aa28.11■■■□□ 2.09
SCN5A-213ENST00000491944 ZSCAN25Q6NSZ9 544 aa28.11■■■□□ 2.09
SCN5A-213ENST00000491944 ADGRA1Q86SQ6 560 aa28.11■■■□□ 2.09
SCN5A-213ENST00000491944 CNTROBQ8N137 903 aa28.11■■■□□ 2.09
SCN5A-213ENST00000491944 RBM46Q8TBY0 533 aaKnown RBP28.11■■■□□ 2.09
SCN5A-213ENST00000491944 RILPL2Q969X0 211 aa28.11■■■□□ 2.09
SCN5A-213ENST00000491944 ZNF70Q9UC06 446 aaPredicted RBP28.11■■■□□ 2.09
SCN5A-213ENST00000491944 PGAP2Q9UHJ9 254 aa28.11■■■□□ 2.09
SCN5A-213ENST00000491944 ZNF532Q9HCE3 1301 aa28.11■■■□□ 2.09
SCN5A-213ENST00000491944 TMED8Q6PL24 325 aaPredicted RBP28.11■■■□□ 2.09
SCN5A-213ENST00000491944 TMOD2Q9NZR1 351 aa28.11■■■□□ 2.09
SCN5A-213ENST00000491944 GPR75-ASB3A0A0A6YYF3 556 aa28.1■■■□□ 2.09
SCN5A-213ENST00000491944 ADD2P35612 726 aa28.1■■■□□ 2.09
SCN5A-213ENST00000491944 SMC1BQ8NDV3 1235 aa28.1■■■□□ 2.09
SCN5A-213ENST00000491944 USP40Q9NVE5 1235 aa28.1■■■□□ 2.09
SCN5A-213ENST00000491944 AATFQ9NY61 560 aaKnown RBP eCLIP28.1■■■□□ 2.09
SCN5A-213ENST00000491944 PITPNM2Q9BZ72 1349 aa28.09■■■□□ 2.09
SCN5A-213ENST00000491944 BAG3O95817 575 aa28.09■■■□□ 2.09
SCN5A-213ENST00000491944 LRRFIP1Q32MZ4 808 aaKnown RBP28.09■■■□□ 2.09
SCN5A-213ENST00000491944 SLFNL1Q499Z3 407 aa28.09■■■□□ 2.09
SCN5A-213ENST00000491944 CDC42EP5Q6NZY7 148 aa28.09■■■□□ 2.09
SCN5A-213ENST00000491944 APOBEC3FQ8IUX4 373 aaKnown RBP28.09■■■□□ 2.09
SCN5A-213ENST00000491944 MIGA1Q8NAN2 632 aa28.09■■■□□ 2.09
SCN5A-213ENST00000491944 SCAF8Q9UPN6 1271 aaKnown RBP28.09■■■□□ 2.09
SCN5A-213ENST00000491944 TCRBV5S4A2TA0A5A2 114 aa28.08■■■□□ 2.09
SCN5A-213ENST00000491944 CHGBP05060 677 aa28.08■■■□□ 2.09
SCN5A-213ENST00000491944 CACNB3P54284 484 aa28.08■■■□□ 2.09
SCN5A-213ENST00000491944 KRT26Q7Z3Y9 468 aa28.08■■■□□ 2.09
SCN5A-213ENST00000491944 SULF1Q8IWU6 871 aa28.08■■■□□ 2.09
SCN5A-213ENST00000491944 RNF113AO15541 343 aaKnown RBP28.07■■■□□ 2.08
SCN5A-213ENST00000491944 GSPT1P15170 499 aaKnown RBP28.07■■■□□ 2.08
SCN5A-213ENST00000491944 GLIS2Q9BZE0 524 aaPredicted RBP28.07■■■□□ 2.08
SCN5A-213ENST00000491944 GTF3C3Q9Y5Q9 886 aa28.07■■■□□ 2.08
SCN5A-213ENST00000491944 TCP10L2B9ZVM9 353 aa28.06■■■□□ 2.08
SCN5A-213ENST00000491944 ZFYP08048 801 aaPredicted RBP28.06■■■□□ 2.08
SCN5A-213ENST00000491944 UBE3CQ15386 1083 aa28.06■■■□□ 2.08
SCN5A-213ENST00000491944 USP48Q86UV5 1035 aa28.06■■■□□ 2.08
SCN5A-213ENST00000491944 ADM5C9JUS6 153 aa28.05■■■□□ 2.08
SCN5A-213ENST00000491944 PLCG2P16885 1265 aa28.05■■■□□ 2.08
SCN5A-213ENST00000491944 DYNLL1P63167 89 aaKnown RBP28.05■■■□□ 2.08
SCN5A-213ENST00000491944 CDC37L1Q7L3B6 337 aa28.05■■■□□ 2.08
SCN5A-213ENST00000491944 MAGEB6P1A0A0J9YX57 407 aa28.04■■■□□ 2.08
SCN5A-213ENST00000491944 TNFAIP1Q13829 316 aa28.04■■■□□ 2.08
SCN5A-213ENST00000491944 SH3RF3Q8TEJ3 882 aaPredicted RBP28.04■■■□□ 2.08
SCN5A-213ENST00000491944 RHBDL3P58872 404 aa28.03■■■□□ 2.08
SCN5A-213ENST00000491944 PPP4CP60510 307 aa28.03■■■□□ 2.08
SCN5A-213ENST00000491944 FSTL1Q12841 308 aa28.03■■■□□ 2.08
SCN5A-213ENST00000491944 TEX11Q8IYF3 940 aa28.03■■■□□ 2.08
SCN5A-213ENST00000491944 SDSP20132 328 aa28.02■■■□□ 2.08
SCN5A-213ENST00000491944 APPBP2Q92624 585 aa28.02■■■□□ 2.08
SCN5A-213ENST00000491944 CDK5RAP2Q96SN8 1893 aa28.02■■■□□ 2.08
SCN5A-213ENST00000491944 RFX7Q2KHR2 1363 aa28.01■■■□□ 2.08
SCN5A-213ENST00000491944 TNNI2P48788 182 aa28.01■■■□□ 2.07
SCN5A-213ENST00000491944 CERS3Q8IU89 383 aa28.01■■■□□ 2.07
SCN5A-213ENST00000491944 DEFB129Q9H1M3 183 aa28.01■■■□□ 2.07
SCN5A-213ENST00000491944 TRAF5O00463 557 aa28■■■□□ 2.07
SCN5A-213ENST00000491944 MBD4O95243 580 aa28■■■□□ 2.07
SCN5A-213ENST00000491944 TCP10Q12799 353 aa28■■■□□ 2.07
SCN5A-213ENST00000491944 NFIAQ12857 509 aa28■■■□□ 2.07
SCN5A-213ENST00000491944 FKBP1CQ5VVH2 108 aa28■■■□□ 2.07
SCN5A-213ENST00000491944 DLK2Q6UY11 383 aa28■■■□□ 2.07
SCN5A-213ENST00000491944 RIOK1Q9BRS2 568 aaKnown RBP28■■■□□ 2.07
SCN5A-213ENST00000491944 WDHD1O75717 1129 aaPredicted RBP27.99■■■□□ 2.07
SCN5A-213ENST00000491944 ITGBL1O95965 494 aaPredicted RBP27.99■■■□□ 2.07
SCN5A-213ENST00000491944 PICALMQ13492 652 aa27.99■■■□□ 2.07
SCN5A-213ENST00000491944 RASA3Q14644 834 aa27.99■■■□□ 2.07
SCN5A-213ENST00000491944 AIDAQ96BJ3 306 aa27.99■■■□□ 2.07
SCN5A-213ENST00000491944 PUS7LQ9H0K6 701 aaKnown RBP27.99■■■□□ 2.07
SCN5A-213ENST00000491944 ARMT1Q9H993 441 aa27.99■■■□□ 2.07
SCN5A-213ENST00000491944 CNTNAP1P78357 1384 aa27.99■■■□□ 2.07
SCN5A-213ENST00000491944 TICAM2Q86XR7 235 aa27.99■■■□□ 2.07
SCN5A-213ENST00000491944 LCORLQ8N3X6 602 aa27.99■■■□□ 2.07
SCN5A-213ENST00000491944 OSBP2Q969R2 916 aa27.99■■■□□ 2.07
SCN5A-213ENST00000491944 IDI2Q9BXS1 227 aa27.99■■■□□ 2.07
SCN5A-213ENST00000491944 FAM198AQ9UFP1 575 aa27.99■■■□□ 2.07
SCN5A-213ENST00000491944 FOCADQ5VW36 1801 aa27.98■■■□□ 2.07
SCN5A-213ENST00000491944 FMR1Q06787 632 aaKnown RBP eCLIP27.98■■■□□ 2.07
SCN5A-213ENST00000491944 ZMYM1Q5SVZ6 1142 aa27.98■■■□□ 2.07
SCN5A-213ENST00000491944 PRAMEF18Q5VWM3 479 aa27.98■■■□□ 2.07
SCN5A-213ENST00000491944 FAM83AQ86UY5 434 aa27.98■■■□□ 2.07
SCN5A-213ENST00000491944 PPP2R3BQ9Y5P8 575 aa27.98■■■□□ 2.07
SCN5A-213ENST00000491944 TGFBRAP1Q8WUH2 860 aa27.97■■■□□ 2.07
SCN5A-213ENST00000491944 CDCA5Q96FF9 252 aa27.97■■■□□ 2.07
SCN5A-213ENST00000491944 CRNKL1Q9BZJ0 848 aaKnown RBP27.97■■■□□ 2.07
SCN5A-213ENST00000491944 TMEM39BQ9GZU3 492 aa27.97■■■□□ 2.07
SCN5A-213ENST00000491944 DDX4Q9NQI0 724 aaKnown RBP27.97■■■□□ 2.07
SCN5A-213ENST00000491944 DIAPH3Q9NSV4 1193 aa27.97■■■□□ 2.07
SCN5A-213ENST00000491944 TRPM7Q96QT4 1865 aa27.96■■■□□ 2.07
SCN5A-213ENST00000491944 M0R2C6 588 aa27.96■■■□□ 2.07
SCN5A-213ENST00000491944 USP5P45974 858 aa27.96■■■□□ 2.07
SCN5A-213ENST00000491944 BMP2KLQ5H9B9 411 aa27.96■■■□□ 2.07
SCN5A-213ENST00000491944 SEC62Q99442 399 aaKnown RBP27.96■■■□□ 2.07
SCN5A-213ENST00000491944 HIP1O00291 1037 aa27.95■■■□□ 2.06
SCN5A-213ENST00000491944 ENTPD3O75355 529 aa27.95■■■□□ 2.06
SCN5A-213ENST00000491944 NMIQ13287 307 aaPredicted RBP27.95■■■□□ 2.06
SCN5A-213ENST00000491944 MAPKAPK5Q8IW41 473 aa27.95■■■□□ 2.06
SCN5A-213ENST00000491944 FAM151AQ8WW52 585 aa27.95■■■□□ 2.06
SCN5A-213ENST00000491944 FAM227BQ96M60 508 aa27.95■■■□□ 2.06
SCN5A-213ENST00000491944 ZNF408Q9H9D4 720 aa27.95■■■□□ 2.06
SCN5A-213ENST00000491944 A0A0D9SFI3 127 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms