RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 PTPN18Q99952 460 aa18.52■□□□□ 0.56
CDC42SE1-205ENST00000491825 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.52■□□□□ 0.56
CDC42SE1-205ENST00000491825 SUGT1Q9Y2Z0 365 aa18.52■□□□□ 0.56
CDC42SE1-205ENST00000491825 CACNB3P54284 484 aa18.51■□□□□ 0.55
CDC42SE1-205ENST00000491825 FBXO46Q6PJ61 603 aaPredicted RBP18.51■□□□□ 0.55
CDC42SE1-205ENST00000491825 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.51■□□□□ 0.55
CDC42SE1-205ENST00000491825 MS4A4AQ96JQ5 239 aa18.51■□□□□ 0.55
CDC42SE1-205ENST00000491825 ELP3Q9H9T3 547 aa18.51■□□□□ 0.55
CDC42SE1-205ENST00000491825 SLC5A1P13866 664 aa18.5■□□□□ 0.55
CDC42SE1-205ENST00000491825 TNNI2P48788 182 aa18.5■□□□□ 0.55
CDC42SE1-205ENST00000491825 VGLL4Q14135 290 aa18.5■□□□□ 0.55
CDC42SE1-205ENST00000491825 EXOC6Q8TAG9 804 aa18.5■□□□□ 0.55
CDC42SE1-205ENST00000491825 CNKSR2Q8WXI2 1034 aa18.5■□□□□ 0.55
CDC42SE1-205ENST00000491825 OPTNQ96CV9 577 aa18.5■□□□□ 0.55
CDC42SE1-205ENST00000491825 PCDHB15Q9Y5E8 787 aa18.5■□□□□ 0.55
CDC42SE1-205ENST00000491825 MAST3O60307 1309 aa18.49■□□□□ 0.55
CDC42SE1-205ENST00000491825 SURF6O75683 361 aaKnown RBP18.49■□□□□ 0.55
CDC42SE1-205ENST00000491825 G3BP1Q13283 466 aaKnown RBP eCLIP18.49■□□□□ 0.55
CDC42SE1-205ENST00000491825 CRHR2Q13324 411 aa18.49■□□□□ 0.55
CDC42SE1-205ENST00000491825 FKBP1CQ5VVH2 108 aa18.49■□□□□ 0.55
CDC42SE1-205ENST00000491825 HHIPL2Q6UWX4 724 aa18.49■□□□□ 0.55
CDC42SE1-205ENST00000491825 FAM83AQ86UY5 434 aa18.49■□□□□ 0.55
CDC42SE1-205ENST00000491825 CEP126Q9P2H0 1117 aa18.49■□□□□ 0.55
CDC42SE1-205ENST00000491825 RPAP1Q9BWH6 1393 aaPredicted RBP18.49■□□□□ 0.55
CDC42SE1-205ENST00000491825 MAP3K9P80192 1104 aa18.48■□□□□ 0.55
CDC42SE1-205ENST00000491825 HSP90AB4PQ58FF6 505 aa18.48■□□□□ 0.55
CDC42SE1-205ENST00000491825 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
CDC42SE1-205ENST00000491825 WDR66Q8TBY9 1149 aa18.47■□□□□ 0.55
CDC42SE1-205ENST00000491825 BRI3BPQ8WY22 251 aa18.47■□□□□ 0.55
CDC42SE1-205ENST00000491825 BRCA2P51587 3418 aa18.47■□□□□ 0.55
CDC42SE1-205ENST00000491825 ZBTB22O15209 634 aa18.46■□□□□ 0.55
CDC42SE1-205ENST00000491825 CAP1Q01518 475 aa18.46■□□□□ 0.55
CDC42SE1-205ENST00000491825 HDAC1Q13547 482 aaPredicted RBP18.46■□□□□ 0.55
CDC42SE1-205ENST00000491825 ATP2B3Q16720 1220 aa18.46■□□□□ 0.55
CDC42SE1-205ENST00000491825 OTOP1Q7RTM1 612 aa18.46■□□□□ 0.55
CDC42SE1-205ENST00000491825 GPR108Q9NPR9 543 aa18.46■□□□□ 0.55
CDC42SE1-205ENST00000491825 EXOC6BQ9Y2D4 811 aa18.46■□□□□ 0.55
CDC42SE1-205ENST00000491825 AKAP2Q9Y2D5 859 aa18.46■□□□□ 0.55
CDC42SE1-205ENST00000491825 SNCAIPQ9Y6H5 919 aa18.46■□□□□ 0.55
CDC42SE1-205ENST00000491825 CENPFP49454 3210 aa18.46■□□□□ 0.55
CDC42SE1-205ENST00000491825 SPDYE5A6NIY4 337 aa18.45■□□□□ 0.54
CDC42SE1-205ENST00000491825 PRDX5P30044 214 aa18.45■□□□□ 0.54
CDC42SE1-205ENST00000491825 IRX6P78412 446 aaPredicted RBP18.45■□□□□ 0.54
CDC42SE1-205ENST00000491825 TFCP2Q12800 502 aa18.45■□□□□ 0.54
CDC42SE1-205ENST00000491825 OS9Q13438 667 aaPredicted RBP18.45■□□□□ 0.54
CDC42SE1-205ENST00000491825 OTUD7BQ6GQQ9 843 aa18.45■□□□□ 0.54
CDC42SE1-205ENST00000491825 TMOD2Q9NZR1 351 aa18.45■□□□□ 0.54
CDC42SE1-205ENST00000491825 DAGLAQ9Y4D2 1042 aa18.45■□□□□ 0.54
CDC42SE1-205ENST00000491825 TRIM17Q9Y577 477 aa18.45■□□□□ 0.54
CDC42SE1-205ENST00000491825 SALL1Q9NSC2 1324 aa18.45■□□□□ 0.54
CDC42SE1-205ENST00000491825 RAB11FIP3O75154 756 aa18.44■□□□□ 0.54
CDC42SE1-205ENST00000491825 DIXDC1Q155Q3 683 aa18.44■□□□□ 0.54
CDC42SE1-205ENST00000491825 OTUD5Q96G74 571 aa18.44■□□□□ 0.54
CDC42SE1-205ENST00000491825 DCTPP1Q9H773 170 aa18.44■□□□□ 0.54
CDC42SE1-205ENST00000491825 CSADQ9Y600 493 aa18.44■□□□□ 0.54
CDC42SE1-205ENST00000491825 CCL15-CCL14A0A0B4J2E2 113 aa18.43■□□□□ 0.54
CDC42SE1-205ENST00000491825 PHKA1P46020 1223 aa18.43■□□□□ 0.54
CDC42SE1-205ENST00000491825 GTF2A2P52657 109 aa18.43■□□□□ 0.54
CDC42SE1-205ENST00000491825 CCL15Q16663 113 aa18.43■□□□□ 0.54
CDC42SE1-205ENST00000491825 CD99L2Q8TCZ2 262 aa18.43■□□□□ 0.54
CDC42SE1-205ENST00000491825 ERO1AQ96HE7 468 aa18.43■□□□□ 0.54
CDC42SE1-205ENST00000491825 WRNIP1Q96S55 665 aa18.43■□□□□ 0.54
CDC42SE1-205ENST00000491825 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.43■□□□□ 0.54
CDC42SE1-205ENST00000491825 MKI67P46013 3256 aaKnown RBP18.43■□□□□ 0.54
CDC42SE1-205ENST00000491825 A0A1B0GUL7 405 aa18.42■□□□□ 0.54
CDC42SE1-205ENST00000491825 SEMA3EO15041 775 aa18.42■□□□□ 0.54
CDC42SE1-205ENST00000491825 ADORA1P30542 326 aa18.42■□□□□ 0.54
CDC42SE1-205ENST00000491825 NFIAQ12857 509 aa18.42■□□□□ 0.54
CDC42SE1-205ENST00000491825 CDC42EP5Q6NZY7 148 aa18.42■□□□□ 0.54
CDC42SE1-205ENST00000491825 ERO1BQ86YB8 467 aa18.42■□□□□ 0.54
CDC42SE1-205ENST00000491825 FAM43AQ8N2R8 423 aa18.42■□□□□ 0.54
CDC42SE1-205ENST00000491825 ZKSCAN4Q969J2 545 aaPredicted RBP18.42■□□□□ 0.54
CDC42SE1-205ENST00000491825 KIF1BPQ96EK5 621 aa18.42■□□□□ 0.54
CDC42SE1-205ENST00000491825 MYH13Q9UKX3 1938 aa18.41■□□□□ 0.54
CDC42SE1-205ENST00000491825 SLC34A2O95436 690 aa18.41■□□□□ 0.54
CDC42SE1-205ENST00000491825 SP3Q02447 781 aa18.41■□□□□ 0.54
CDC42SE1-205ENST00000491825 TNNI3KQ59H18 835 aa18.41■□□□□ 0.54
CDC42SE1-205ENST00000491825 RHPN1Q8TCX5 695 aa18.41■□□□□ 0.54
CDC42SE1-205ENST00000491825 FAM151AQ8WW52 585 aa18.41■□□□□ 0.54
CDC42SE1-205ENST00000491825 HOOK2Q96ED9 719 aa18.41■□□□□ 0.54
CDC42SE1-205ENST00000491825 GNL3LQ9NVN8 582 aaKnown RBP18.41■□□□□ 0.54
CDC42SE1-205ENST00000491825 DENND2AQ9ULE3 1009 aa18.41■□□□□ 0.54
CDC42SE1-205ENST00000491825 PTPN22Q9Y2R2 807 aa18.41■□□□□ 0.54
CDC42SE1-205ENST00000491825 FPGT-TNNI3KV9GXZ4 949 aa18.41■□□□□ 0.54
CDC42SE1-205ENST00000491825 IRF6O14896 467 aa18.4■□□□□ 0.54
CDC42SE1-205ENST00000491825 PPIL2Q13356 520 aa18.4■□□□□ 0.54
CDC42SE1-205ENST00000491825 TAF1CQ15572 869 aaPredicted RBP18.4■□□□□ 0.54
CDC42SE1-205ENST00000491825 DCAF15Q66K64 600 aa18.4■□□□□ 0.54
CDC42SE1-205ENST00000491825 CCDC102BQ68D86 513 aa18.4■□□□□ 0.54
CDC42SE1-205ENST00000491825 FAM198AQ9UFP1 575 aa18.4■□□□□ 0.54
CDC42SE1-205ENST00000491825 PDS5AQ29RF7 1337 aaKnown RBP18.4■□□□□ 0.54
CDC42SE1-205ENST00000491825 RFX7Q2KHR2 1363 aa18.4■□□□□ 0.54
CDC42SE1-205ENST00000491825 ATRNL1Q5VV63 1379 aa18.4■□□□□ 0.54
CDC42SE1-205ENST00000491825 LDHBP07195 334 aaKnown RBP18.39■□□□□ 0.53
CDC42SE1-205ENST00000491825 INPP5BP32019 993 aa18.39■□□□□ 0.53
CDC42SE1-205ENST00000491825 RASGRF1Q13972 1273 aa18.39■□□□□ 0.53
CDC42SE1-205ENST00000491825 MIGA2Q7L4E1 593 aa18.39■□□□□ 0.53
CDC42SE1-205ENST00000491825 ZNF341Q9BYN7 854 aa18.39■□□□□ 0.53
CDC42SE1-205ENST00000491825 EFCC1Q9HA90 598 aa18.39■□□□□ 0.53
CDC42SE1-205ENST00000491825 ZNF112Q9UJU3 913 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms