RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 C21orf2O43822 256 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 DKK1O94907 266 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 GTF2F1P35269 517 aaKnown RBP eCLIP5.87□□□□□ -1.47
CLIP4-211ENST00000491701 HSP90AB2PQ58FF8 381 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 NUTM2GQ5VZR2 741 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 SDE2Q6IQ49 451 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 PODNQ7Z5L7 613 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 ARHGEF25Q86VW2 580 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 METTL16Q86W50 562 aaKnown RBP5.87□□□□□ -1.47
CLIP4-211ENST00000491701 RGL4Q8IZJ4 473 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 GALNT6Q8NCL4 622 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 NGDNQ8NEJ9 315 aaKnown RBP5.87□□□□□ -1.47
CLIP4-211ENST00000491701 ARMC5Q96C12 935 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 PHACTR3Q96KR7 559 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 NLRP2Q9NX02 1062 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 HCN4Q9Y3Q4 1203 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 SBNO1A3KN83 1393 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 MSH6P52701 1360 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 SPATA31A3Q5VYP0 1347 aa5.86□□□□□ -1.47
CLIP4-211ENST00000491701 EIF4A2Q14240 407 aaKnown RBP5.86□□□□□ -1.47
CLIP4-211ENST00000491701 ARSJQ5FYB0 599 aaPredicted RBP5.86□□□□□ -1.47
CLIP4-211ENST00000491701 BICDL1Q6ZP65 573 aa5.86□□□□□ -1.47
CLIP4-211ENST00000491701 TMEM87AQ8NBN3 555 aa5.86□□□□□ -1.47
CLIP4-211ENST00000491701 MKNK1Q9BUB5 465 aa5.86□□□□□ -1.47
CLIP4-211ENST00000491701 TGIF2Q9GZN2 237 aa5.86□□□□□ -1.47
CLIP4-211ENST00000491701 METTL14Q9HCE5 456 aaKnown RBP5.86□□□□□ -1.47
CLIP4-211ENST00000491701 PPME1Q9Y570 386 aa5.86□□□□□ -1.47
CLIP4-211ENST00000491701 LMO7Q8WWI1 1683 aa5.86□□□□□ -1.47
CLIP4-211ENST00000491701 ABCA3Q99758 1704 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 NCAPD2Q15021 1401 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 LOC102724159A0A0B4J2E5 919 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 SERTM1A2A2V5 107 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 K7ELQ4 463 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-211ENST00000491701 ARHGAP4P98171 946 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 FKBP4Q02790 459 aaKnown RBP eCLIP5.85□□□□□ -1.47
CLIP4-211ENST00000491701 PWP2Q15269 919 aaKnown RBP5.85□□□□□ -1.47
CLIP4-211ENST00000491701 MTFR1Q15390 333 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 OCLNQ16625 522 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 CCDC146Q8IYE0 955 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 GPATCH3Q96I76 525 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 GMCL1Q96IK5 515 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 SPACA7Q96KW9 195 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 RUBCNLQ9H714 662 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 CAPN10Q9HC96 672 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 CXXC1Q9P0U4 656 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-211ENST00000491701 RGS17Q9UGC6 210 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-211ENST00000491701 RIPOR2Q9Y4F9 1068 aa5.85□□□□□ -1.47
CLIP4-211ENST00000491701 CDK12Q9NYV4 1490 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-211ENST00000491701 SPATA31C2B4DYI2 1134 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 M0R2N6 131 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 APAF1O14727 1248 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 GCP02774 474 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 ATF3P18847 181 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 HOXC9P31274 260 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 NOS2P35228 1153 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 EPHA4P54764 986 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 PSMA6P60900 246 aaKnown RBP5.84□□□□□ -1.47
CLIP4-211ENST00000491701 IGBP1P78318 339 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 SH3PXD2AQ5TCZ1 1133 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 PGBD3Q8N328 593 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 ABTB2Q8N961 1025 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 GTF3C2Q8WUA4 911 aaPredicted RBP5.84□□□□□ -1.47
CLIP4-211ENST00000491701 IP6K1Q92551 441 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 GTPBP3Q969Y2 492 aaKnown RBP5.84□□□□□ -1.47
CLIP4-211ENST00000491701 COG3Q96JB2 828 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 NEUROD4Q9HD90 331 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 IQSEC3Q9UPP2 1182 aaPredicted RBP5.84□□□□□ -1.47
CLIP4-211ENST00000491701 GJA3Q9Y6H8 435 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 COL16A1Q07092 1604 aaPredicted RBP5.84□□□□□ -1.47
CLIP4-211ENST00000491701 JCADQ9P266 1359 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 RNF123Q5XPI4 1314 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 ZBED9Q6R2W3 1325 aa5.84□□□□□ -1.47
CLIP4-211ENST00000491701 CAMTA1Q9Y6Y1 1673 aa5.84□□□□□ -1.48
CLIP4-211ENST00000491701 AHDC1Q5TGY3 1603 aaPredicted RBP5.83□□□□□ -1.48
CLIP4-211ENST00000491701 KRBA1A5PL33 1030 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 P4HBP07237 508 aaKnown RBP5.83□□□□□ -1.48
CLIP4-211ENST00000491701 TATP17735 454 aaPredicted RBP5.83□□□□□ -1.48
CLIP4-211ENST00000491701 MSX1P28360 303 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 TXLNAP40222 546 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 BAG6P46379 1132 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 SNRPNP63162 240 aaKnown RBP5.83□□□□□ -1.48
CLIP4-211ENST00000491701 HNRNPUQ00839 825 aaKnown RBP eCLIP5.83□□□□□ -1.48
CLIP4-211ENST00000491701 RBL2Q08999 1139 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 SF3B2Q13435 895 aaKnown RBP5.83□□□□□ -1.48
CLIP4-211ENST00000491701 PTPROQ16827 1216 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 FOXR1Q6PIV2 292 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 TCP11L2Q8N4U5 519 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 ZDHHC1Q8WTX9 485 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 RNF34Q969K3 372 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 CCSER2Q9H7U1 834 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 METTL5Q9NRN9 209 aaKnown RBP5.83□□□□□ -1.48
CLIP4-211ENST00000491701 SUGT1Q9Y2Z0 365 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 DYRK1BQ9Y463 629 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.83□□□□□ -1.48
CLIP4-211ENST00000491701 SRCAPQ6ZRS2 3230 aa5.83□□□□□ -1.48
CLIP4-211ENST00000491701 FAM208AQ9UK61 1670 aaKnown RBP5.83□□□□□ -1.48
CLIP4-211ENST00000491701 hCG_2014768A0A024R1R8 64 aa5.82□□□□□ -1.48
CLIP4-211ENST00000491701 A0A1B0GTH6 734 aa5.82□□□□□ -1.48
CLIP4-211ENST00000491701 DIAPH1O60610 1272 aaKnown RBP5.82□□□□□ -1.48
CLIP4-211ENST00000491701 F11P03951 625 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms