RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 ITPKAP23677 461 aa9.09□□□□□ -0.95
TM9SF3-206ENST00000490192 TBC1D8BQ0IIM8 1120 aa9.09□□□□□ -0.95
TM9SF3-206ENST00000490192 BNC2Q6ZN30 1099 aaPredicted RBP9.09□□□□□ -0.95
TM9SF3-206ENST00000490192 FBXO27Q8NI29 283 aa9.09□□□□□ -0.95
TM9SF3-206ENST00000490192 TRPM4Q8TD43 1214 aa9.09□□□□□ -0.95
TM9SF3-206ENST00000490192 ROBO2Q9HCK4 1378 aa9.09□□□□□ -0.95
TM9SF3-206ENST00000490192 KIF4AO95239 1232 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 F13A1P00488 732 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 COL8A1P27658 744 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 MCM4P33991 863 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 ADH7P40394 386 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 RPS26P62854 115 aaKnown RBP9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 HYAL2Q12891 473 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 IFRD2Q12894 506 aaPredicted RBP9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 DDR2Q16832 855 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 FBXW10Q5XX13 1052 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 TRIM42Q8IWZ5 723 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 FERD3LQ96RJ6 166 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 CRBNQ96SW2 442 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 SEC31BQ9NQW1 1179 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 ACTR10Q9NZ32 417 aa9.08□□□□□ -0.96
TM9SF3-206ENST00000490192 PSAPP07602 524 aa9.07□□□□□ -0.96
TM9SF3-206ENST00000490192 GIPRP48546 466 aa9.07□□□□□ -0.96
TM9SF3-206ENST00000490192 HOMER1Q86YM7 354 aa9.07□□□□□ -0.96
TM9SF3-206ENST00000490192 PLVAPQ9BX97 442 aa9.07□□□□□ -0.96
TM9SF3-206ENST00000490192 LRRC3Q9BY71 257 aa9.07□□□□□ -0.96
TM9SF3-206ENST00000490192 UBE2OQ9C0C9 1292 aaKnown RBP9.07□□□□□ -0.96
TM9SF3-206ENST00000490192 ARID4BQ4LE39 1312 aaPredicted RBP9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 KRBA1A5PL33 1030 aa9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 M0R082 166 aa9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 PDPK1O15530 556 aa9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 TRIM37O94972 964 aa9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 LMNB1P20700 586 aa9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 RPUSD2Q8IZ73 545 aaKnown RBP9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 CEP120Q8N960 986 aa9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 ZNF417Q8TAU3 575 aa9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 JARID2Q92833 1246 aaPredicted RBP9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 PLD4Q96BZ4 506 aa9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 HHIPQ96QV1 700 aa9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 ZNF587Q96SQ5 575 aaPredicted RBP9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 TLR7Q9NYK1 1049 aaKnown RBP9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 GPN3Q9UHW5 284 aaPredicted RBP9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 PCDHB5Q9Y5E4 795 aa9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.06□□□□□ -0.96
TM9SF3-206ENST00000490192 A0A096LPE4 126 aa9.05□□□□□ -0.96
TM9SF3-206ENST00000490192 A0A1W2PPZ6 126 aa9.05□□□□□ -0.96
TM9SF3-206ENST00000490192 NFKB1P19838 968 aa9.05□□□□□ -0.96
TM9SF3-206ENST00000490192 SOX18P35713 384 aa9.05□□□□□ -0.96
TM9SF3-206ENST00000490192 FAAP100Q0VG06 881 aa9.05□□□□□ -0.96
TM9SF3-206ENST00000490192 RASGRF1Q13972 1273 aa9.05□□□□□ -0.96
TM9SF3-206ENST00000490192 KIAA0907Q7Z7F0 614 aaPredicted RBP9.05□□□□□ -0.96
TM9SF3-206ENST00000490192 GATAD2BQ8WXI9 593 aa9.05□□□□□ -0.96
TM9SF3-206ENST00000490192 SPOCK3Q9BQ16 436 aa9.05□□□□□ -0.96
TM9SF3-206ENST00000490192 BHLHE41Q9C0J9 482 aaPredicted RBP9.05□□□□□ -0.96
TM9SF3-206ENST00000490192 MAPK8IP1Q9UQF2 711 aa9.05□□□□□ -0.96
TM9SF3-206ENST00000490192 ZNF165P49910 485 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 GYS2P54840 703 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 AMPD3Q01432 767 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 PLAURQ03405 335 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 SEPT6Q14141 434 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 MPP2Q14168 576 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 PCSK7Q16549 785 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 CWF19L2Q2TBE0 894 aaKnown RBP9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 PRRT3Q5FWE3 981 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 ARSHQ5FYA8 562 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 CCDC84Q86UT8 332 aaPredicted RBP9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 ASAP3Q8TDY4 903 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 MIR1-1HGQ9H1L0 117 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 ZNF576Q9H609 170 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 TMEM260Q9NX78 707 aa9.04□□□□□ -0.96
TM9SF3-206ENST00000490192 FAM221AA4D161 298 aa9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 PARNO95453 639 aaKnown RBP9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 ZNF157P51786 506 aaPredicted RBP9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 SQSTM1Q13501 440 aa9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 PLEKHG6Q3KR16 790 aa9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 RPS26P11Q5JNZ5 115 aaPredicted RBP9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 LARP1BQ659C4 914 aaKnown RBP9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 TMEM102Q8N9M5 508 aaPredicted RBP9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 OR6P1Q8NGX9 317 aa9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 NXPE3Q969Y0 559 aa9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 NSUN5Q96P11 429 aaKnown RBP9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 MDFIQ99750 246 aa9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 TMX1Q9H3N1 280 aa9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 LEMD3Q9Y2U8 911 aa9.03□□□□□ -0.96
TM9SF3-206ENST00000490192 NFKBIEO00221 500 aa9.02□□□□□ -0.97
TM9SF3-206ENST00000490192 LILRB5O75023 590 aa9.02□□□□□ -0.97
TM9SF3-206ENST00000490192 FXNQ16595 210 aa9.02□□□□□ -0.97
TM9SF3-206ENST00000490192 GK5Q6ZS86 529 aa9.02□□□□□ -0.97
TM9SF3-206ENST00000490192 MICALL1Q8N3F8 863 aa9.02□□□□□ -0.97
TM9SF3-206ENST00000490192 TRIM11Q96F44 468 aa9.02□□□□□ -0.97
TM9SF3-206ENST00000490192 TNKS2Q9H2K2 1166 aa9.02□□□□□ -0.97
TM9SF3-206ENST00000490192 BRMS1Q9HCU9 246 aa9.02□□□□□ -0.97
TM9SF3-206ENST00000490192 TMEM39AQ9NV64 488 aa9.02□□□□□ -0.97
TM9SF3-206ENST00000490192 DDX56Q9NY93 547 aaKnown RBP9.02□□□□□ -0.97
TM9SF3-206ENST00000490192 PPME1Q9Y570 386 aa9.02□□□□□ -0.97
TM9SF3-206ENST00000490192 SPATA31C1P0DKV0 1188 aa9.01□□□□□ -0.97
TM9SF3-206ENST00000490192 HOXD8P13378 290 aaPredicted RBP9.01□□□□□ -0.97
TM9SF3-206ENST00000490192 CLCQ05315 142 aa9.01□□□□□ -0.97
TM9SF3-206ENST00000490192 TRIM28Q13263 835 aaKnown RBP9.01□□□□□ -0.97
TM9SF3-206ENST00000490192 MTERF2Q49AM1 385 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms