RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 ARHGEF25Q86VW2 580 aa10.09□□□□□ -0.79
SMC6-209ENST00000489535 C7orf43Q8WVR3 580 aa10.09□□□□□ -0.79
SMC6-209ENST00000489535 EML1O00423 815 aa10.08□□□□□ -0.8
SMC6-209ENST00000489535 ZC3H6P61129 1189 aaKnown RBP10.08□□□□□ -0.8
SMC6-209ENST00000489535 SPEM2Q0P670 501 aa10.08□□□□□ -0.8
SMC6-209ENST00000489535 DUSP27Q5VZP5 1158 aa10.08□□□□□ -0.8
SMC6-209ENST00000489535 RAB44Q7Z6P3 723 aaPredicted RBP10.08□□□□□ -0.8
SMC6-209ENST00000489535 WDR63Q8IWG1 891 aa10.08□□□□□ -0.8
SMC6-209ENST00000489535 PHACTR3Q96KR7 559 aa10.08□□□□□ -0.8
SMC6-209ENST00000489535 KDRP35968 1356 aa10.08□□□□□ -0.8
SMC6-209ENST00000489535 SHANK3Q9BYB0 1731 aa10.07□□□□□ -0.8
SMC6-209ENST00000489535 KDM3BQ7LBC6 1761 aa10.07□□□□□ -0.8
SMC6-209ENST00000489535 E9PSI1 815 aa10.07□□□□□ -0.8
SMC6-209ENST00000489535 LILRB5O75023 590 aa10.07□□□□□ -0.8
SMC6-209ENST00000489535 TRMT2AQ8IZ69 625 aaKnown RBP10.07□□□□□ -0.8
SMC6-209ENST00000489535 RNF112Q9ULX5 631 aa10.07□□□□□ -0.8
SMC6-209ENST00000489535 MAP7D1Q3KQU3 841 aa10.06□□□□□ -0.8
SMC6-209ENST00000489535 PLPP7Q8NBV4 271 aa10.06□□□□□ -0.8
SMC6-209ENST00000489535 ANKRD24Q8TF21 1146 aa10.06□□□□□ -0.8
SMC6-209ENST00000489535 NRAPQ86VF7 1730 aa10.06□□□□□ -0.8
SMC6-209ENST00000489535 NCAPD2Q15021 1401 aa10.06□□□□□ -0.8
SMC6-209ENST00000489535 NWD2Q9ULI1 1742 aa10.05□□□□□ -0.8
SMC6-209ENST00000489535 CPDO75976 1380 aa10.05□□□□□ -0.8
SMC6-209ENST00000489535 KIAA0232Q92628 1395 aa10.05□□□□□ -0.8
SMC6-209ENST00000489535 IRF5Q13568 498 aa10.05□□□□□ -0.8
SMC6-209ENST00000489535 USHBP1Q8N6Y0 703 aa10.05□□□□□ -0.8
SMC6-209ENST00000489535 RCAN3Q9UKA8 241 aa10.05□□□□□ -0.8
SMC6-209ENST00000489535 TBC1D2BQ9UPU7 963 aa10.05□□□□□ -0.8
SMC6-209ENST00000489535 KAT6BQ8WYB5 2073 aa10.04□□□□□ -0.8
SMC6-209ENST00000489535 ADAMTS7Q9UKP4 1686 aa10.04□□□□□ -0.8
SMC6-209ENST00000489535 IRX6P78412 446 aaPredicted RBP10.04□□□□□ -0.8
SMC6-209ENST00000489535 LMOD3Q0VAK6 560 aa10.04□□□□□ -0.8
SMC6-209ENST00000489535 LRRC59Q96AG4 307 aaKnown RBP10.04□□□□□ -0.8
SMC6-209ENST00000489535 KRTAP4-9Q9BYQ8 210 aa10.04□□□□□ -0.8
SMC6-209ENST00000489535 MYH16Q9H6N6 1097 aa10.04□□□□□ -0.8
SMC6-209ENST00000489535 SCHIP1Q9P0W5 487 aaPredicted RBP10.04□□□□□ -0.8
SMC6-209ENST00000489535 GPC6Q9Y625 555 aaPredicted RBP10.04□□□□□ -0.8
SMC6-209ENST00000489535 TOM1O60784 492 aa10.03□□□□□ -0.8
SMC6-209ENST00000489535 COBLO75128 1261 aa10.03□□□□□ -0.8
SMC6-209ENST00000489535 RAC1P63000 192 aa10.03□□□□□ -0.8
SMC6-209ENST00000489535 TEAD4Q15561 434 aa10.03□□□□□ -0.8
SMC6-209ENST00000489535 CHRNA2Q15822 529 aa10.03□□□□□ -0.8
SMC6-209ENST00000489535 NBPF6Q5VWK0 638 aa10.03□□□□□ -0.8
SMC6-209ENST00000489535 ILDR2Q71H61 639 aa10.03□□□□□ -0.8
SMC6-209ENST00000489535 NBPF4Q96M43 638 aa10.03□□□□□ -0.8
SMC6-209ENST00000489535 PCDHGA11Q9Y5H2 935 aa10.03□□□□□ -0.8
SMC6-209ENST00000489535 IL16Q14005 1332 aa10.03□□□□□ -0.8
SMC6-209ENST00000489535 RNF123Q5XPI4 1314 aa10.03□□□□□ -0.8
SMC6-209ENST00000489535 ITGB4P16144 1822 aa10.03□□□□□ -0.8
SMC6-209ENST00000489535 NOS2P35228 1153 aa10.02□□□□□ -0.81
SMC6-209ENST00000489535 MTHFSDQ2M296 383 aaKnown RBP10.02□□□□□ -0.81
SMC6-209ENST00000489535 GAS2L2Q8NHY3 880 aa10.02□□□□□ -0.81
SMC6-209ENST00000489535 FAM83GA6ND36 823 aa10.01□□□□□ -0.81
SMC6-209ENST00000489535 RRP1P56182 461 aaKnown RBP10.01□□□□□ -0.81
SMC6-209ENST00000489535 PIP4K2BP78356 416 aa10.01□□□□□ -0.81
SMC6-209ENST00000489535 CALD1Q05682 793 aaKnown RBP10.01□□□□□ -0.81
SMC6-209ENST00000489535 FMR1NBQ8N0W7 255 aaPredicted RBP10.01□□□□□ -0.81
SMC6-209ENST00000489535 TSR2Q969E8 191 aaKnown RBP10.01□□□□□ -0.81
SMC6-209ENST00000489535 THUMPD2Q9BTF0 503 aaKnown RBP10.01□□□□□ -0.81
SMC6-209ENST00000489535 PRDM11Q9NQV5 511 aa10.01□□□□□ -0.81
SMC6-209ENST00000489535 LAS1LQ9Y4W2 734 aaKnown RBP10.01□□□□□ -0.81
SMC6-209ENST00000489535 COL5A2P05997 1499 aaPredicted RBP10.01□□□□□ -0.81
SMC6-209ENST00000489535 FANCIQ9NVI1 1328 aa10.01□□□□□ -0.81
SMC6-209ENST00000489535 UBAP1LF5GYI3 381 aa10□□□□□ -0.81
SMC6-209ENST00000489535 KCNQ4P56696 695 aa10□□□□□ -0.81
SMC6-209ENST00000489535 GNAI1P63096 354 aa10□□□□□ -0.81
SMC6-209ENST00000489535 DCTN1Q14203 1278 aa10□□□□□ -0.81
SMC6-209ENST00000489535 IL27Q8NEV9 243 aa10□□□□□ -0.81
SMC6-209ENST00000489535 FMNL2Q96PY5 1086 aa10□□□□□ -0.81
SMC6-209ENST00000489535 NEUROD4Q9HD90 331 aa10□□□□□ -0.81
SMC6-209ENST00000489535 USP21Q9UK80 565 aa10□□□□□ -0.81
SMC6-209ENST00000489535 MAP3K5Q99683 1374 aa10□□□□□ -0.81
SMC6-209ENST00000489535 BACH1O14867 736 aa9.99□□□□□ -0.81
SMC6-209ENST00000489535 PAX4O43316 350 aa9.99□□□□□ -0.81
SMC6-209ENST00000489535 EPHA4P54764 986 aa9.99□□□□□ -0.81
SMC6-209ENST00000489535 RTF1Q92541 710 aaKnown RBP9.99□□□□□ -0.81
SMC6-209ENST00000489535 JPH1Q9HDC5 661 aaPredicted RBP9.99□□□□□ -0.81
SMC6-209ENST00000489535 BRD7Q9NPI1 651 aa9.99□□□□□ -0.81
SMC6-209ENST00000489535 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.99□□□□□ -0.81
SMC6-209ENST00000489535 N4BP2Q86UW6 1770 aaPredicted RBP9.98□□□□□ -0.81
SMC6-209ENST00000489535 MEGF6O75095 1541 aa9.98□□□□□ -0.81
SMC6-209ENST00000489535 GNAT3A8MTJ3 354 aa9.98□□□□□ -0.81
SMC6-209ENST00000489535 EXOSC9Q06265 439 aaKnown RBP9.98□□□□□ -0.81
SMC6-209ENST00000489535 VAC14Q08AM6 782 aa9.98□□□□□ -0.81
SMC6-209ENST00000489535 MCM10Q7L590 875 aa9.98□□□□□ -0.81
SMC6-209ENST00000489535 IFT57Q9NWB7 429 aa9.98□□□□□ -0.81
SMC6-209ENST00000489535 NLRP2Q9NX02 1062 aa9.98□□□□□ -0.81
SMC6-209ENST00000489535 C5P01031 1676 aa9.98□□□□□ -0.81
SMC6-209ENST00000489535 TOGARAM1Q9Y4F4 1720 aa9.98□□□□□ -0.81
SMC6-209ENST00000489535 CRB1P82279 1406 aa9.98□□□□□ -0.81
SMC6-209ENST00000489535 LAMB4A4D0S4 1761 aa9.97□□□□□ -0.81
SMC6-209ENST00000489535 HTATSF1O43719 755 aaKnown RBP9.97□□□□□ -0.81
SMC6-209ENST00000489535 TXKP42681 527 aa9.97□□□□□ -0.81
SMC6-209ENST00000489535 AFF1P51825 1210 aaKnown RBP9.97□□□□□ -0.81
SMC6-209ENST00000489535 PLEKHO1Q53GL0 409 aaPredicted RBP9.97□□□□□ -0.81
SMC6-209ENST00000489535 SH3PXD2AQ5TCZ1 1133 aa9.97□□□□□ -0.81
SMC6-209ENST00000489535 NUDT8Q8WV74 236 aa9.97□□□□□ -0.81
SMC6-209ENST00000489535 KRTAP4-2Q9BYR5 136 aa9.97□□□□□ -0.81
SMC6-209ENST00000489535 ZNF358Q9NW07 568 aa9.97□□□□□ -0.81
SMC6-209ENST00000489535 SLC6A14Q9UN76 642 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms