RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SP3Q02447 781 aa14.7□□□□□ -0.06
ACTN4-206ENST00000489451 NFIAQ12857 509 aa14.7□□□□□ -0.06
ACTN4-206ENST00000489451 ERO1AQ96HE7 468 aa14.7□□□□□ -0.06
ACTN4-206ENST00000489451 WRNIP1Q96S55 665 aa14.7□□□□□ -0.06
ACTN4-206ENST00000489451 MEIS3Q99687 375 aa14.7□□□□□ -0.06
ACTN4-206ENST00000489451 LRRFIP2Q9Y608 721 aaKnown RBP14.7□□□□□ -0.06
ACTN4-206ENST00000489451 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.7□□□□□ -0.06
ACTN4-206ENST00000489451 MAST3O60307 1309 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 MYH2Q9UKX2 1941 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 IRF6O14896 467 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 UBTFL1P0CB47 393 aaPredicted RBP14.69□□□□□ -0.06
ACTN4-206ENST00000489451 EN2P19622 333 aaPredicted RBP14.69□□□□□ -0.06
ACTN4-206ENST00000489451 INPP5BP32019 993 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 GTF2A2P52657 109 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 OTUD7BQ6GQQ9 843 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 CDC42EP5Q6NZY7 148 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 WDR66Q8TBY9 1149 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 ARMC5Q96C12 935 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 FAM198AQ9UFP1 575 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 CSADQ9Y600 493 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 RFX7Q2KHR2 1363 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 ATRNL1Q5VV63 1379 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 DOCK2Q92608 1830 aa14.69□□□□□ -0.06
ACTN4-206ENST00000489451 BTBD19C9JJ37 291 aa14.68□□□□□ -0.06
ACTN4-206ENST00000489451 H0YGN5 161 aa14.68□□□□□ -0.06
ACTN4-206ENST00000489451 TAF1CQ15572 869 aaPredicted RBP14.68□□□□□ -0.06
ACTN4-206ENST00000489451 ATP2B3Q16720 1220 aa14.68□□□□□ -0.06
ACTN4-206ENST00000489451 MIGA2Q7L4E1 593 aa14.68□□□□□ -0.06
ACTN4-206ENST00000489451 ZFPM1Q8IX07 1006 aa14.68□□□□□ -0.06
ACTN4-206ENST00000489451 EFCC1Q9HA90 598 aa14.68□□□□□ -0.06
ACTN4-206ENST00000489451 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
ACTN4-206ENST00000489451 COL6A3P12111 3177 aa14.68□□□□□ -0.06
ACTN4-206ENST00000489451 KIAA0100Q14667 2235 aaKnown RBP14.68□□□□□ -0.06
ACTN4-206ENST00000489451 SALL1Q9NSC2 1324 aa14.67□□□□□ -0.06
ACTN4-206ENST00000489451 A0A0C4DFX4 3053 aa14.67□□□□□ -0.06
ACTN4-206ENST00000489451 ZBTB22O15209 634 aa14.67□□□□□ -0.06
ACTN4-206ENST00000489451 CT47B1P0C2W7 299 aaPredicted RBP14.67□□□□□ -0.06
ACTN4-206ENST00000489451 RARSP54136 660 aaKnown RBP14.67□□□□□ -0.06
ACTN4-206ENST00000489451 MOGSQ13724 837 aa14.67□□□□□ -0.06
ACTN4-206ENST00000489451 ERO1BQ86YB8 467 aa14.67□□□□□ -0.06
ACTN4-206ENST00000489451 ARHGAP39Q9C0H5 1083 aa14.67□□□□□ -0.06
ACTN4-206ENST00000489451 COPRSQ9NQ92 184 aa14.67□□□□□ -0.06
ACTN4-206ENST00000489451 TMOD2Q9NZR1 351 aa14.67□□□□□ -0.06
ACTN4-206ENST00000489451 ZNF112Q9UJU3 913 aa14.67□□□□□ -0.06
ACTN4-206ENST00000489451 TNNQ9UQP3 1299 aa14.67□□□□□ -0.06
ACTN4-206ENST00000489451 AK9Q5TCS8 1911 aa14.66□□□□□ -0.06
ACTN4-206ENST00000489451 SLURP2P0DP57 97 aa14.66□□□□□ -0.06
ACTN4-206ENST00000489451 CTGFP29279 349 aa14.66□□□□□ -0.06
ACTN4-206ENST00000489451 TCP10Q12799 353 aa14.66□□□□□ -0.06
ACTN4-206ENST00000489451 PPIL2Q13356 520 aa14.66□□□□□ -0.06
ACTN4-206ENST00000489451 FAM151AQ8WW52 585 aa14.66□□□□□ -0.06
ACTN4-206ENST00000489451 CEP126Q9P2H0 1117 aa14.66□□□□□ -0.06
ACTN4-206ENST00000489451 RBM27Q9P2N5 1060 aaKnown RBP14.66□□□□□ -0.06
ACTN4-206ENST00000489451 PTCH2Q9Y6C5 1203 aa14.66□□□□□ -0.06
ACTN4-206ENST00000489451 ADGRA2Q96PE1 1338 aa14.66□□□□□ -0.06
ACTN4-206ENST00000489451 PTPRFP10586 1907 aa14.65□□□□□ -0.06
ACTN4-206ENST00000489451 PHIPQ8WWQ0 1821 aa14.65□□□□□ -0.06
ACTN4-206ENST00000489451 IL15P40933 162 aaPredicted RBP14.65□□□□□ -0.06
ACTN4-206ENST00000489451 RASGRF1Q13972 1273 aa14.65□□□□□ -0.06
ACTN4-206ENST00000489451 CCDC102BQ68D86 513 aa14.65□□□□□ -0.06
ACTN4-206ENST00000489451 ZNF333Q96JL9 665 aa14.65□□□□□ -0.06
ACTN4-206ENST00000489451 ZNF341Q9BYN7 854 aa14.65□□□□□ -0.06
ACTN4-206ENST00000489451 API5Q9BZZ5 524 aaKnown RBP14.65□□□□□ -0.06
ACTN4-206ENST00000489451 ZFYVE28Q9HCC9 887 aa14.65□□□□□ -0.06
ACTN4-206ENST00000489451 GAKO14976 1311 aa14.65□□□□□ -0.06
ACTN4-206ENST00000489451 TLR2O60603 784 aa14.64□□□□□ -0.07
ACTN4-206ENST00000489451 CETPP11597 493 aa14.64□□□□□ -0.07
ACTN4-206ENST00000489451 TIMM10P62072 90 aa14.64□□□□□ -0.07
ACTN4-206ENST00000489451 SH3BP5LQ7L8J4 393 aa14.64□□□□□ -0.07
ACTN4-206ENST00000489451 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.64□□□□□ -0.07
ACTN4-206ENST00000489451 ZNF384Q8TF68 577 aa14.64□□□□□ -0.07
ACTN4-206ENST00000489451 TMEM106CQ9BVX2 250 aa14.64□□□□□ -0.07
ACTN4-206ENST00000489451 ZCCHC17Q9NP64 241 aaKnown RBP14.64□□□□□ -0.07
ACTN4-206ENST00000489451 KCNH4Q9UQ05 1017 aa14.64□□□□□ -0.07
ACTN4-206ENST00000489451 CEP290O15078 2479 aa14.64□□□□□ -0.07
ACTN4-206ENST00000489451 SEMA3EO15041 775 aa14.63□□□□□ -0.07
ACTN4-206ENST00000489451 LDHBP07195 334 aaKnown RBP14.63□□□□□ -0.07
ACTN4-206ENST00000489451 PPATQ06203 517 aa14.63□□□□□ -0.07
ACTN4-206ENST00000489451 SNAPC2Q13487 334 aa14.63□□□□□ -0.07
ACTN4-206ENST00000489451 MTX1Q13505 466 aa14.63□□□□□ -0.07
ACTN4-206ENST00000489451 NOL9Q5SY16 702 aaKnown RBP14.63□□□□□ -0.07
ACTN4-206ENST00000489451 DCAF15Q66K64 600 aa14.63□□□□□ -0.07
ACTN4-206ENST00000489451 C17orf99Q6UX52 265 aa14.63□□□□□ -0.07
ACTN4-206ENST00000489451 DDX4Q9NQI0 724 aaKnown RBP14.63□□□□□ -0.07
ACTN4-206ENST00000489451 USP40Q9NVE5 1235 aa14.63□□□□□ -0.07
ACTN4-206ENST00000489451 DENND2AQ9ULE3 1009 aa14.63□□□□□ -0.07
ACTN4-206ENST00000489451 PHF20L1A8MW92 1017 aa14.62□□□□□ -0.07
ACTN4-206ENST00000489451 LACTBP83111 547 aaPredicted RBP14.62□□□□□ -0.07
ACTN4-206ENST00000489451 DOCK1Q14185 1865 aa14.62□□□□□ -0.07
ACTN4-206ENST00000489451 PPP4R3CPQ6ZMV5 832 aa14.62□□□□□ -0.07
ACTN4-206ENST00000489451 A0A1B0GUL7 405 aa14.61□□□□□ -0.07
ACTN4-206ENST00000489451 CCER2I3L3R5 266 aa14.61□□□□□ -0.07
ACTN4-206ENST00000489451 WDHD1O75717 1129 aaPredicted RBP14.61□□□□□ -0.07
ACTN4-206ENST00000489451 TRIM27P14373 513 aa14.61□□□□□ -0.07
ACTN4-206ENST00000489451 RGS3P49796 1198 aa14.61□□□□□ -0.07
ACTN4-206ENST00000489451 TFCP2Q12800 502 aa14.61□□□□□ -0.07
ACTN4-206ENST00000489451 GPAT2Q6NUI2 795 aa14.61□□□□□ -0.07
ACTN4-206ENST00000489451 PI16Q6UXB8 463 aa14.61□□□□□ -0.07
ACTN4-206ENST00000489451 ARHGAP45Q92619 1136 aa14.61□□□□□ -0.07
ACTN4-206ENST00000489451 HOOK2Q96ED9 719 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms