RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 DZIP1Q86YF9 867 aaKnown RBP21.4■■□□□ 1.02
CD40-206ENST00000489304 TPCN1Q9ULQ1 816 aa21.4■■□□□ 1.02
CD40-206ENST00000489304 CD2APQ9Y5K6 639 aa21.4■■□□□ 1.02
CD40-206ENST00000489304 SLC4A4Q9Y6R1 1079 aa21.4■■□□□ 1.02
CD40-206ENST00000489304 NUCB2P80303 420 aa21.39■■□□□ 1.01
CD40-206ENST00000489304 DIXDC1Q155Q3 683 aa21.39■■□□□ 1.01
CD40-206ENST00000489304 MFSD14BQ5SR56 506 aa21.39■■□□□ 1.01
CD40-206ENST00000489304 CERS5Q8N5B7 392 aa21.39■■□□□ 1.01
CD40-206ENST00000489304 NACAP1Q9BZK3 213 aa21.39■■□□□ 1.01
CD40-206ENST00000489304 NBPF3Q9H094 633 aa21.39■■□□□ 1.01
CD40-206ENST00000489304 ME3Q16798 604 aa21.38■■□□□ 1.01
CD40-206ENST00000489304 Q6ZUG5 572 aa21.38■■□□□ 1.01
CD40-206ENST00000489304 NLGN2Q8NFZ4 835 aa21.38■■□□□ 1.01
CD40-206ENST00000489304 AGXT2Q9BYV1 514 aa21.38■■□□□ 1.01
CD40-206ENST00000489304 NAPBQ9H115 298 aa21.38■■□□□ 1.01
CD40-206ENST00000489304 ECE2O60344 883 aa21.38■■□□□ 1.01
CD40-206ENST00000489304 KIAA2012Q0VF49 1180 aa21.38■■□□□ 1.01
CD40-206ENST00000489304 DALRD3Q5D0E6 543 aaKnown RBP21.38■■□□□ 1.01
CD40-206ENST00000489304 FBXL16Q8N461 479 aa21.38■■□□□ 1.01
CD40-206ENST00000489304 AATFQ9NY61 560 aaKnown RBP eCLIP21.38■■□□□ 1.01
CD40-206ENST00000489304 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.38■■□□□ 1.01
CD40-206ENST00000489304 MYH2Q9UKX2 1941 aa21.37■■□□□ 1.01
CD40-206ENST00000489304 PPIP5K2O43314 1243 aa21.37■■□□□ 1.01
CD40-206ENST00000489304 MB21D2Q8IYB1 491 aaPredicted RBP21.37■■□□□ 1.01
CD40-206ENST00000489304 RTKN2Q8IZC4 609 aa21.37■■□□□ 1.01
CD40-206ENST00000489304 SUPT20HQ8NEM7 779 aa21.37■■□□□ 1.01
CD40-206ENST00000489304 NCOA7Q8NI08 942 aa21.37■■□□□ 1.01
CD40-206ENST00000489304 TBC1D22AQ8WUA7 517 aa21.36■■□□□ 1.01
CD40-206ENST00000489304 SDR42E1Q8WUS8 393 aa21.36■■□□□ 1.01
CD40-206ENST00000489304 ZNF277Q9NRM2 450 aaPredicted RBP21.36■■□□□ 1.01
CD40-206ENST00000489304 BAZ2AQ9UIF9 1905 aaKnown RBP21.36■■□□□ 1.01
CD40-206ENST00000489304 WDR19Q8NEZ3 1342 aa21.36■■□□□ 1.01
CD40-206ENST00000489304 PODNQ7Z5L7 613 aa21.35■■□□□ 1.01
CD40-206ENST00000489304 TBC1D10CQ8IV04 446 aa21.35■■□□□ 1.01
CD40-206ENST00000489304 TNPO1Q92973 898 aaKnown RBP21.35■■□□□ 1.01
CD40-206ENST00000489304 SPON1Q9HCB6 807 aa21.35■■□□□ 1.01
CD40-206ENST00000489304 F8W031 263 aaPredicted RBP21.35■■□□□ 1.01
CD40-206ENST00000489304 MCM5P33992 734 aa21.35■■□□□ 1.01
CD40-206ENST00000489304 TDO2P48775 406 aa21.35■■□□□ 1.01
CD40-206ENST00000489304 GSTO1P78417 241 aa21.35■■□□□ 1.01
CD40-206ENST00000489304 ST3GAL1Q11201 340 aa21.35■■□□□ 1.01
CD40-206ENST00000489304 GIMAP6Q6P9H5 292 aa21.35■■□□□ 1.01
CD40-206ENST00000489304 PSMD1Q99460 953 aa21.35■■□□□ 1.01
CD40-206ENST00000489304 YDJCA8MPS7 323 aa21.34■■□□□ 1.01
CD40-206ENST00000489304 RALYLQ86SE5 291 aaKnown RBP21.34■■□□□ 1.01
CD40-206ENST00000489304 CCDC83Q8IWF9 413 aa21.34■■□□□ 1.01
CD40-206ENST00000489304 BRF1Q92994 677 aa21.34■■□□□ 1.01
CD40-206ENST00000489304 BCS1LQ9Y276 419 aa21.34■■□□□ 1.01
CD40-206ENST00000489304 TRDNQ13061 729 aa21.33■■□□□ 1.01
CD40-206ENST00000489304 GRIPAP1Q4V328 841 aa21.33■■□□□ 1.01
CD40-206ENST00000489304 LRRC2Q9BYS8 371 aa21.33■■□□□ 1.01
CD40-206ENST00000489304 COL4A5P29400 1685 aa21.33■■□□□ 1
CD40-206ENST00000489304 LDHCP07864 332 aa21.32■■□□□ 1
CD40-206ENST00000489304 FGD1P98174 961 aa21.32■■□□□ 1
CD40-206ENST00000489304 CLEC17AQ6ZS10 378 aa21.32■■□□□ 1
CD40-206ENST00000489304 NECAB1Q8N987 351 aa21.32■■□□□ 1
CD40-206ENST00000489304 TACC3Q9Y6A5 838 aa21.32■■□□□ 1
CD40-206ENST00000489304 MROH7-TTC4A0A0A0MT08 1334 aa21.32■■□□□ 1
CD40-206ENST00000489304 LAMB1P07942 1786 aa21.32■■□□□ 1
CD40-206ENST00000489304 BRCA1P38398 1863 aaKnown RBP21.32■■□□□ 1
CD40-206ENST00000489304 SMIM22K7EJ46 135 aa21.32■■□□□ 1
CD40-206ENST00000489304 PRC1O43663 620 aa21.32■■□□□ 1
CD40-206ENST00000489304 ANTXR2P58335 489 aa21.32■■□□□ 1
CD40-206ENST00000489304 DACT2Q5SW24 774 aa21.32■■□□□ 1
CD40-206ENST00000489304 NKX2-3Q8TAU0 364 aa21.32■■□□□ 1
CD40-206ENST00000489304 CRNKL1Q9BZJ0 848 aaKnown RBP21.32■■□□□ 1
CD40-206ENST00000489304 ANAPC4Q9UJX5 808 aa21.32■■□□□ 1
CD40-206ENST00000489304 SMC3Q9UQE7 1217 aa21.32■■□□□ 1
CD40-206ENST00000489304 EVCP57679 992 aa21.31■■□□□ 1
CD40-206ENST00000489304 PKP1Q13835 747 aa21.31■■□□□ 1
CD40-206ENST00000489304 AKNAD1Q5T1N1 836 aa21.31■■□□□ 1
CD40-206ENST00000489304 SH3RF3Q8TEJ3 882 aaPredicted RBP21.31■■□□□ 1
CD40-206ENST00000489304 INCENPQ9NQS7 918 aa21.31■■□□□ 1
CD40-206ENST00000489304 ZDHHC9Q9Y397 364 aa21.31■■□□□ 1
CD40-206ENST00000489304 CDK5RAP2Q96SN8 1893 aa21.31■■□□□ 1
CD40-206ENST00000489304 SCN9AQ15858 1988 aa21.31■■□□□ 1
CD40-206ENST00000489304 MCM4P33991 863 aa21.3■■□□□ 1
CD40-206ENST00000489304 BTDP43251 543 aa21.3■■□□□ 1
CD40-206ENST00000489304 PPP4CP60510 307 aa21.3■■□□□ 1
CD40-206ENST00000489304 CTDSPL2Q05D32 466 aa21.3■■□□□ 1
CD40-206ENST00000489304 SOGA3Q5TF21 947 aa21.3■■□□□ 1
CD40-206ENST00000489304 CHST3Q7LGC8 479 aa21.3■■□□□ 1
CD40-206ENST00000489304 LARGE2Q8N3Y3 721 aa21.3■■□□□ 1
CD40-206ENST00000489304 STAG1Q8WVM7 1258 aa21.3■■□□□ 1
CD40-206ENST00000489304 GTF3C6Q969F1 213 aa21.3■■□□□ 1
CD40-206ENST00000489304 CNNM2Q9H8M5 875 aa21.3■■□□□ 1
CD40-206ENST00000489304 ATP8A2Q9NTI2 1148 aa21.3■■□□□ 1
CD40-206ENST00000489304 NEDD4P46934 1319 aa21.29■■□□□ 1
CD40-206ENST00000489304 USP17L3A6NCW0 530 aa21.29■■□□□ 1
CD40-206ENST00000489304 USP17L4A6NCW7 530 aa21.29■■□□□ 1
CD40-206ENST00000489304 NFKBIEO00221 500 aa21.29■■□□□ 1
CD40-206ENST00000489304 PFKFB2O60825 505 aa21.29■■□□□ 1
CD40-206ENST00000489304 SCNN1DP51172 638 aa21.29■■□□□ 1
CD40-206ENST00000489304 PPARAQ07869 468 aa21.29■■□□□ 1
CD40-206ENST00000489304 STRIP1Q5VSL9 837 aa21.29■■□□□ 1
CD40-206ENST00000489304 USP17L1Q7RTZ2 530 aa21.29■■□□□ 1
CD40-206ENST00000489304 ZNF274Q96GC6 653 aaPredicted RBP21.29■■□□□ 1
CD40-206ENST00000489304 TTF2Q9UNY4 1162 aaKnown RBP21.29■■□□□ 1
CD40-206ENST00000489304 SUGT1Q9Y2Z0 365 aa21.29■■□□□ 1
CD40-206ENST00000489304 CYP2D7A0A087X1C5 515 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms